Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC007613.1-201ENST00000572811 2597 ntBASIC14.77□□□□□ -0.05
VPS25Q9BRG1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VPS25Q9BRG1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS25Q9BRG1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS25Q9BRG1 FAM99A-202ENST00000538190 1989 ntBASIC14.74□□□□□ -0.05
VPS25Q9BRG1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
VPS25Q9BRG1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 TNXA-203ENST00000507684 2038 ntBASIC14.73□□□□□ -0.05
VPS25Q9BRG1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS25Q9BRG1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms