RNA–Protein interactions for RNA: ENST00000325425.12

SCNN1D-201, Transcript of sodium channel epithelial 1 delta subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCNN1D, Length 2,679 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1D-201ENST00000325425 NISCHQ9Y2I1 1504 aa38.79■■■■□ 3.8
SCNN1D-201ENST00000325425 CCDC180Q9P1Z9 1646 aa33.31■■■□□ 2.92
SCNN1D-201ENST00000325425 ZCCHC6Q5VYS8 1495 aaKnown RBP32.63■■■□□ 2.81
SCNN1D-201ENST00000325425 SHROOM4Q9ULL8 1493 aa32.43■■■□□ 2.78
SCNN1D-201ENST00000325425 DCAF8L2P0C7V8 631 aa32.42■■■□□ 2.78
SCNN1D-201ENST00000325425 DCAF1Q9Y4B6 1507 aa31.86■■■□□ 2.69
SCNN1D-201ENST00000325425 ABCC9O60706 1549 aa31.57■■■□□ 2.64
SCNN1D-201ENST00000325425 SUPT5HO00267 1087 aaKnown RBP31.48■■■□□ 2.63
SCNN1D-201ENST00000325425 MYO15BQ96JP2 1530 aa31.27■■■□□ 2.6
SCNN1D-201ENST00000325425 SCRIBQ14160 1630 aa31.05■■■□□ 2.56
SCNN1D-201ENST00000325425 NACADO15069 1562 aa31.05■■■□□ 2.56
SCNN1D-201ENST00000325425 RB1CC1Q8TDY2 1594 aa30.69■■■□□ 2.5
SCNN1D-201ENST00000325425 RSF1Q96T23 1441 aaPredicted RBP30.4■■■□□ 2.46
SCNN1D-201ENST00000325425 CECR2Q9BXF3 1484 aa30.29■■■□□ 2.44
SCNN1D-201ENST00000325425 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
SCNN1D-201ENST00000325425 MROH2BQ7Z745 1585 aa30.09■■■□□ 2.41
SCNN1D-201ENST00000325425 UNC13AQ9UPW8 1703 aa30.08■■■□□ 2.41
SCNN1D-201ENST00000325425 PABPN1Q86U42 306 aaKnown RBP eCLIP30.06■■■□□ 2.4
SCNN1D-201ENST00000325425 BICRAQ9NZM4 1560 aa29.85■■■□□ 2.37
SCNN1D-201ENST00000325425 BAZ1AQ9NRL2 1556 aaPredicted RBP29.85■■■□□ 2.37
SCNN1D-201ENST00000325425 WIZO95785 1651 aa29.84■■■□□ 2.37
SCNN1D-201ENST00000325425 SMARCA4P51532 1647 aa29.66■■■□□ 2.34
SCNN1D-201ENST00000325425 TRIM41Q8WV44 630 aa29.42■■■□□ 2.3
SCNN1D-201ENST00000325425 TOP2AP11388 1531 aaKnown RBP29.41■■■□□ 2.3
SCNN1D-201ENST00000325425 LOC105371045A0A1W2PR82 267 aa29.29■■■□□ 2.28
SCNN1D-201ENST00000325425 CCDC88BA6NC98 1476 aa29.29■■■□□ 2.28
SCNN1D-201ENST00000325425 SMARCA2P51531 1590 aa29.2■■■□□ 2.27
SCNN1D-201ENST00000325425 PEG3Q9GZU2 1588 aa29.17■■■□□ 2.26
SCNN1D-201ENST00000325425 ATAD2BQ9ULI0 1458 aa29.16■■■□□ 2.26
SCNN1D-201ENST00000325425 FAM9AQ8IZU1 332 aaPredicted RBP29.1■■■□□ 2.25
SCNN1D-201ENST00000325425 EIF4G1Q04637 1599 aaKnown RBP29.06■■■□□ 2.24
SCNN1D-201ENST00000325425 BAZ1BQ9UIG0 1483 aaKnown RBP29.01■■■□□ 2.24
SCNN1D-201ENST00000325425 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
SCNN1D-201ENST00000325425 EHMT2Q96KQ7 1210 aa28.83■■■□□ 2.21
SCNN1D-201ENST00000325425 NCAPD3P42695 1498 aa28.77■■■□□ 2.2
SCNN1D-201ENST00000325425 PELP1Q8IZL8 1130 aaKnown RBP28.74■■■□□ 2.19
SCNN1D-201ENST00000325425 HMGXB3Q12766 1538 aa28.64■■■□□ 2.17
SCNN1D-201ENST00000325425 WRNQ14191 1432 aaPredicted RBP eCLIP28.58■■■□□ 2.17
SCNN1D-201ENST00000325425 SOGA1O94964 1423 aa28.51■■■□□ 2.15
SCNN1D-201ENST00000325425 HRCP23327 699 aa28.49■■■□□ 2.15
SCNN1D-201ENST00000325425 PCGF6Q9BYE7 350 aa28.43■■■□□ 2.14
SCNN1D-201ENST00000325425 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
SCNN1D-201ENST00000325425 RUSC2Q8N2Y8 1516 aa28.4■■■□□ 2.14
SCNN1D-201ENST00000325425 SYNJ1O43426 1573 aa28.4■■■□□ 2.14
SCNN1D-201ENST00000325425 CSRNP3Q8WYN3 585 aa28.35■■■□□ 2.13
SCNN1D-201ENST00000325425 CFTRP13569 1480 aa28.29■■■□□ 2.12
SCNN1D-201ENST00000325425 EEA1Q15075 1411 aa28.26■■■□□ 2.11
SCNN1D-201ENST00000325425 CADPSQ9ULU8 1353 aa28.16■■■□□ 2.1
SCNN1D-201ENST00000325425 PPARGC1BQ86YN6 1023 aaKnown RBP28.15■■■□□ 2.1
SCNN1D-201ENST00000325425 TOP2BQ02880 1626 aa28.14■■■□□ 2.1
SCNN1D-201ENST00000325425 UBTFP17480 764 aaKnown RBP28.14■■■□□ 2.1
SCNN1D-201ENST00000325425 TRIM26Q12899 539 aaPredicted RBP28.12■■■□□ 2.09
SCNN1D-201ENST00000325425 CUX1P39880 1505 aa28.07■■■□□ 2.08
SCNN1D-201ENST00000325425 TNIKQ9UKE5 1360 aa28.05■■■□□ 2.08
SCNN1D-201ENST00000325425 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
SCNN1D-201ENST00000325425 GOLGA3Q08378 1498 aa27.99■■■□□ 2.07
SCNN1D-201ENST00000325425 CEP162Q5TB80 1403 aa27.98■■■□□ 2.07
SCNN1D-201ENST00000325425 DNAJC5BQ9UF47 199 aa27.98■■■□□ 2.07
SCNN1D-201ENST00000325425 MYT1Q01538 1121 aa27.95■■■□□ 2.06
SCNN1D-201ENST00000325425 CEP164Q9UPV0 1460 aa27.93■■■□□ 2.06
SCNN1D-201ENST00000325425 NESP48681 1621 aa27.87■■■□□ 2.05
SCNN1D-201ENST00000325425 PRDM2Q13029 1718 aa27.86■■■□□ 2.05
SCNN1D-201ENST00000325425 RAPGEF2Q9Y4G8 1499 aa27.84■■■□□ 2.05
SCNN1D-201ENST00000325425 FANCD2Q9BXW9 1451 aa27.84■■■□□ 2.05
SCNN1D-201ENST00000325425 KIF21BO75037 1637 aa27.84■■■□□ 2.05
SCNN1D-201ENST00000325425 KIF27Q86VH2 1401 aa27.78■■■□□ 2.04
SCNN1D-201ENST00000325425 RANGAP1P46060 587 aaPredicted RBP27.75■■■□□ 2.03
SCNN1D-201ENST00000325425 FGD5Q6ZNL6 1462 aa27.7■■■□□ 2.02
SCNN1D-201ENST00000325425 PRXQ9BXM0 1461 aa27.7■■■□□ 2.02
SCNN1D-201ENST00000325425 TTBK1Q5TCY1 1321 aaPredicted RBP27.67■■■□□ 2.02
SCNN1D-201ENST00000325425 CUX2O14529 1486 aa27.67■■■□□ 2.02
SCNN1D-201ENST00000325425 CLIP1P30622 1438 aa27.66■■■□□ 2.02
SCNN1D-201ENST00000325425 LAMC3Q9Y6N6 1575 aa27.61■■■□□ 2.01
SCNN1D-201ENST00000325425 IGF1RP08069 1367 aa27.59■■■□□ 2.01
SCNN1D-201ENST00000325425 ERICH3Q5RHP9 1530 aa27.56■■■□□ 2
SCNN1D-201ENST00000325425 TOPBP1Q92547 1522 aa27.56■■■□□ 2
SCNN1D-201ENST00000325425 DNMBPQ6XZF7 1577 aa27.54■■■□□ 2
SCNN1D-201ENST00000325425 RAD54L2Q9Y4B4 1467 aa27.53■■■□□ 2
SCNN1D-201ENST00000325425 PDS5BQ9NTI5 1447 aa27.52■■■□□ 2
SCNN1D-201ENST00000325425 POLA1P09884 1462 aaPredicted RBP27.49■■□□□ 1.99
SCNN1D-201ENST00000325425 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
SCNN1D-201ENST00000325425 CARMIL1Q5VZK9 1371 aa27.45■■□□□ 1.98
SCNN1D-201ENST00000325425 VPS8Q8N3P4 1428 aa27.42■■□□□ 1.98
SCNN1D-201ENST00000325425 ABCA10Q8WWZ4 1543 aa27.38■■□□□ 1.97
SCNN1D-201ENST00000325425 APLP2Q06481 763 aa27.33■■□□□ 1.97
SCNN1D-201ENST00000325425 KIF21AQ7Z4S6 1674 aa27.31■■□□□ 1.96
SCNN1D-201ENST00000325425 TDRD9Q8NDG6 1382 aaKnown RBP27.29■■□□□ 1.96
SCNN1D-201ENST00000325425 ARAP1Q96P48 1450 aa27.28■■□□□ 1.96
SCNN1D-201ENST00000325425 ARHGAP35Q9NRY4 1499 aa27.2■■□□□ 1.94
SCNN1D-201ENST00000325425 SCAF1Q9H7N4 1312 aaKnown RBP27.18■■□□□ 1.94
SCNN1D-201ENST00000325425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.14■■□□□ 1.94
SCNN1D-201ENST00000325425 ZEB1P37275 1124 aaPredicted RBP27.13■■□□□ 1.93
SCNN1D-201ENST00000325425 GAPVD1Q14C86 1478 aa27.12■■□□□ 1.93
SCNN1D-201ENST00000325425 MRC2Q9UBG0 1479 aa27.1■■□□□ 1.93
SCNN1D-201ENST00000325425 P3H3Q8IVL6 736 aa27.09■■□□□ 1.93
SCNN1D-201ENST00000325425 WDR97A6NE52 1622 aa27.09■■□□□ 1.93
SCNN1D-201ENST00000325425 KANK4Q5T7N3 995 aaPredicted RBP27.09■■□□□ 1.93
SCNN1D-201ENST00000325425 ABCA5Q8WWZ7 1642 aa27.04■■□□□ 1.92
SCNN1D-201ENST00000325425 CUL7Q14999 1698 aa27.03■■□□□ 1.92
SCNN1D-201ENST00000325425 TARBP1Q13395 1621 aaKnown RBP27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms