RNA–Protein interactions for RNA: ENST00000409359.6

ARHGEF4-205, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 5 BASIC

Gene ARHGEF4, Length 5,489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-205ENST00000409359 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
ARHGEF4-205ENST00000409359 SUPT5HO00267 1087 aaKnown RBP26.73■■□□□ 1.87
ARHGEF4-205ENST00000409359 NISCHQ9Y2I1 1504 aa26.44■■□□□ 1.82
ARHGEF4-205ENST00000409359 PELP1Q8IZL8 1130 aaKnown RBP26.38■■□□□ 1.81
ARHGEF4-205ENST00000409359 SHROOM4Q9ULL8 1493 aa26.01■■□□□ 1.75
ARHGEF4-205ENST00000409359 APLP2Q06481 763 aa25.96■■□□□ 1.75
ARHGEF4-205ENST00000409359 EHMT2Q96KQ7 1210 aa25.87■■□□□ 1.73
ARHGEF4-205ENST00000409359 FAM9AQ8IZU1 332 aaPredicted RBP25.7■■□□□ 1.71
ARHGEF4-205ENST00000409359 CCER1Q8TC90 406 aaPredicted RBP25.19■■□□□ 1.62
ARHGEF4-205ENST00000409359 ERICH6Q7L0X2 663 aa25.15■■□□□ 1.62
ARHGEF4-205ENST00000409359 CENPBP07199 599 aaPredicted RBP25.15■■□□□ 1.62
ARHGEF4-205ENST00000409359 ZEB1P37275 1124 aaPredicted RBP25.1■■□□□ 1.61
ARHGEF4-205ENST00000409359 TTBK1Q5TCY1 1321 aaPredicted RBP25.07■■□□□ 1.6
ARHGEF4-205ENST00000409359 PCGF6Q9BYE7 350 aa25.06■■□□□ 1.6
ARHGEF4-205ENST00000409359 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
ARHGEF4-205ENST00000409359 RANGAP1P46060 587 aaPredicted RBP24.82■■□□□ 1.56
ARHGEF4-205ENST00000409359 ATP1B4Q9UN42 357 aaPredicted RBP24.8■■□□□ 1.56
ARHGEF4-205ENST00000409359 NEFLP07196 543 aa24.72■■□□□ 1.55
ARHGEF4-205ENST00000409359 UBTFP17480 764 aaKnown RBP24.67■■□□□ 1.54
ARHGEF4-205ENST00000409359 MYT1Q01538 1121 aa24.46■■□□□ 1.51
ARHGEF4-205ENST00000409359 YTHDC1Q96MU7 727 aaKnown RBP24.3■■□□□ 1.48
ARHGEF4-205ENST00000409359 DAXXQ9UER7 740 aaPredicted RBP24.12■■□□□ 1.45
ARHGEF4-205ENST00000409359 TRIM26Q12899 539 aaPredicted RBP24.08■■□□□ 1.45
ARHGEF4-205ENST00000409359 MYT1LQ9UL68 1186 aa24.01■■□□□ 1.43
ARHGEF4-205ENST00000409359 PPARGC1BQ86YN6 1023 aaKnown RBP23.95■■□□□ 1.42
ARHGEF4-205ENST00000409359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.95■■□□□ 1.42
ARHGEF4-205ENST00000409359 HNRNPUL2Q1KMD3 747 aaKnown RBP23.95■■□□□ 1.42
ARHGEF4-205ENST00000409359 POLR3GLQ9BT43 218 aa23.89■■□□□ 1.41
ARHGEF4-205ENST00000409359 ITGAEP38570 1179 aa23.85■■□□□ 1.41
ARHGEF4-205ENST00000409359 HRCP23327 699 aa23.77■■□□□ 1.4
ARHGEF4-205ENST00000409359 SLC4A1APQ9BWU0 796 aaKnown RBP23.53■■□□□ 1.36
ARHGEF4-205ENST00000409359 CNGB1Q14028 1251 aaPredicted RBP23.5■■□□□ 1.35
ARHGEF4-205ENST00000409359 ZNF316A6NFI3 1004 aaPredicted RBP23.49■■□□□ 1.35
ARHGEF4-205ENST00000409359 RTL5Q5HYW3 569 aaPredicted RBP23.48■■□□□ 1.35
ARHGEF4-205ENST00000409359 CLSPNQ9HAW4 1339 aa23.48■■□□□ 1.35
ARHGEF4-205ENST00000409359 CHIC1Q5VXU3 224 aa23.45■■□□□ 1.34
ARHGEF4-205ENST00000409359 LOC105371045A0A1W2PR82 267 aa23.44■■□□□ 1.34
ARHGEF4-205ENST00000409359 DIEXFQ68CQ4 756 aaKnown RBP23.31■■□□□ 1.32
ARHGEF4-205ENST00000409359 FAM50AQ14320 339 aaKnown RBP23.29■■□□□ 1.32
ARHGEF4-205ENST00000409359 TRIM52Q96A61 297 aa23.26■■□□□ 1.31
ARHGEF4-205ENST00000409359 ZBTB47Q9UFB7 747 aaPredicted RBP23.15■■□□□ 1.3
ARHGEF4-205ENST00000409359 ANP32CO43423 234 aa23.07■■□□□ 1.28
ARHGEF4-205ENST00000409359 NEUROD1Q13562 356 aa23.06■■□□□ 1.28
ARHGEF4-205ENST00000409359 CDK11AQ9UQ88 783 aaPredicted RBP22.98■■□□□ 1.27
ARHGEF4-205ENST00000409359 ZNF326Q5BKZ1 582 aaKnown RBP22.95■■□□□ 1.26
ARHGEF4-205ENST00000409359 NEFMP07197 916 aa22.92■■□□□ 1.26
ARHGEF4-205ENST00000409359 CANXP27824 592 aaKnown RBP22.88■■□□□ 1.25
ARHGEF4-205ENST00000409359 BCANQ96GW7 911 aa22.85■■□□□ 1.25
ARHGEF4-205ENST00000409359 PABPN1Q86U42 306 aaKnown RBP eCLIP22.79■■□□□ 1.24
ARHGEF4-205ENST00000409359 ABCC9O60706 1549 aa22.78■■□□□ 1.24
ARHGEF4-205ENST00000409359 GTF3C3Q9Y5Q9 886 aa22.77■■□□□ 1.24
ARHGEF4-205ENST00000409359 FBLN2P98095 1184 aa22.76■■□□□ 1.23
ARHGEF4-205ENST00000409359 SLC24A1O60721 1099 aa22.75■■□□□ 1.23
ARHGEF4-205ENST00000409359 ANP32AP39687 249 aaKnown RBP22.65■■□□□ 1.22
ARHGEF4-205ENST00000409359 BCL11AQ9H165 835 aa22.58■■□□□ 1.2
ARHGEF4-205ENST00000409359 CSRNP3Q8WYN3 585 aa22.53■■□□□ 1.2
ARHGEF4-205ENST00000409359 ZNF777Q9ULD5 760 aaPredicted RBP22.48■■□□□ 1.19
ARHGEF4-205ENST00000409359 P3H3Q8IVL6 736 aa22.48■■□□□ 1.19
ARHGEF4-205ENST00000409359 ANP32BQ92688 251 aaKnown RBP22.48■■□□□ 1.19
ARHGEF4-205ENST00000409359 ESF1Q9H501 851 aaKnown RBP22.48■■□□□ 1.19
ARHGEF4-205ENST00000409359 ACIN1Q9UKV3 1341 aaKnown RBP22.43■■□□□ 1.18
ARHGEF4-205ENST00000409359 ARID3CA6NKF2 412 aa22.42■■□□□ 1.18
ARHGEF4-205ENST00000409359 UPF2Q9HAU5 1272 aaKnown RBP22.4■■□□□ 1.18
ARHGEF4-205ENST00000409359 TONSLQ96HA7 1378 aa22.39■■□□□ 1.17
ARHGEF4-205ENST00000409359 HSP90AA1P07900 732 aaKnown RBP22.38■■□□□ 1.17
ARHGEF4-205ENST00000409359 NPM2Q86SE8 214 aaKnown RBP22.37■■□□□ 1.17
ARHGEF4-205ENST00000409359 STAG3Q9UJ98 1225 aa22.34■■□□□ 1.17
ARHGEF4-205ENST00000409359 CHGAP10645 457 aaKnown RBP22.28■■□□□ 1.16
ARHGEF4-205ENST00000409359 NPM1P06748 294 aaKnown RBP eCLIP22.24■■□□□ 1.15
ARHGEF4-205ENST00000409359 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.24■■□□□ 1.15
ARHGEF4-205ENST00000409359 FKBP8Q14318 412 aa22.23■■□□□ 1.15
ARHGEF4-205ENST00000409359 HNRNPUQ00839 825 aaKnown RBP eCLIP22.22■■□□□ 1.15
ARHGEF4-205ENST00000409359 FAM9BQ8IZU0 186 aa22.15■■□□□ 1.14
ARHGEF4-205ENST00000409359 TMC1Q8TDI8 760 aa22.13■■□□□ 1.13
ARHGEF4-205ENST00000409359 WDR43Q15061 677 aaKnown RBP eCLIP22.1■■□□□ 1.13
ARHGEF4-205ENST00000409359 DDX10Q13206 875 aaKnown RBP22.1■■□□□ 1.13
ARHGEF4-205ENST00000409359 CCDC136Q96JN2 1154 aa22.09■■□□□ 1.13
ARHGEF4-205ENST00000409359 EIF5BO60841 1220 aaKnown RBP22.08■■□□□ 1.13
ARHGEF4-205ENST00000409359 TSPY4P0CV99 314 aa22.04■■□□□ 1.12
ARHGEF4-205ENST00000409359 TSPY10P0CW01 314 aa22.04■■□□□ 1.12
ARHGEF4-205ENST00000409359 GLIPR1L2Q4G1C9 344 aa22.04■■□□□ 1.12
ARHGEF4-205ENST00000409359 SALL2Q9Y467 1007 aaPredicted RBP22■■□□□ 1.11
ARHGEF4-205ENST00000409359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22■■□□□ 1.11
ARHGEF4-205ENST00000409359 MYH16Q9H6N6 1097 aa21.99■■□□□ 1.11
ARHGEF4-205ENST00000409359 MRS2Q9HD23 443 aa21.96■■□□□ 1.11
ARHGEF4-205ENST00000409359 DCAF1Q9Y4B6 1507 aa21.96■■□□□ 1.11
ARHGEF4-205ENST00000409359 CHIC2Q9UKJ5 165 aa21.96■■□□□ 1.11
ARHGEF4-205ENST00000409359 PLPPR3Q6T4P5 718 aa21.94■■□□□ 1.1
ARHGEF4-205ENST00000409359 SCRIBQ14160 1630 aa21.92■■□□□ 1.1
ARHGEF4-205ENST00000409359 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
ARHGEF4-205ENST00000409359 CDK11BP21127 795 aaKnown RBP21.87■■□□□ 1.09
ARHGEF4-205ENST00000409359 KDM2AQ9Y2K7 1162 aa21.87■■□□□ 1.09
ARHGEF4-205ENST00000409359 ZCCHC6Q5VYS8 1495 aaKnown RBP21.87■■□□□ 1.09
ARHGEF4-205ENST00000409359 EIF4G2P78344 907 aaKnown RBP eCLIP21.83■■□□□ 1.08
ARHGEF4-205ENST00000409359 BECN1Q14457 450 aa21.8■■□□□ 1.08
ARHGEF4-205ENST00000409359 ANP32EQ9BTT0 268 aa21.8■■□□□ 1.08
ARHGEF4-205ENST00000409359 NBR1Q14596 966 aa21.79■■□□□ 1.08
ARHGEF4-205ENST00000409359 DDRGK1Q96HY6 314 aa21.79■■□□□ 1.08
ARHGEF4-205ENST00000409359 NCLP19338 710 aaKnown RBP21.78■■□□□ 1.08
ARHGEF4-205ENST00000409359 SCAF1Q9H7N4 1312 aaKnown RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms