RNA–Protein interactions for RNA: ENST00000409812.6

REPS1-203, Transcript of RALBP1 associated Eps domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene REPS1, Length 2,511 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPS1-203ENST00000409812 NISCHQ9Y2I1 1504 aa39.48■■■■□ 3.91
REPS1-203ENST00000409812 SHROOM4Q9ULL8 1493 aa33.85■■■■□ 3.01
REPS1-203ENST00000409812 CCDC180Q9P1Z9 1646 aa33.78■■■■□ 3
REPS1-203ENST00000409812 ZCCHC6Q5VYS8 1495 aaKnown RBP33.44■■■□□ 2.94
REPS1-203ENST00000409812 SUPT5HO00267 1087 aaKnown RBP33.27■■■□□ 2.92
REPS1-203ENST00000409812 DCAF8L2P0C7V8 631 aa32.72■■■□□ 2.83
REPS1-203ENST00000409812 DCAF1Q9Y4B6 1507 aa32.51■■■□□ 2.8
REPS1-203ENST00000409812 CHIC1Q5VXU3 224 aa32.49■■■□□ 2.79
REPS1-203ENST00000409812 MYO15BQ96JP2 1530 aa32.47■■■□□ 2.79
REPS1-203ENST00000409812 HRCP23327 699 aa31.84■■■□□ 2.69
REPS1-203ENST00000409812 PCGF6Q9BYE7 350 aa31.68■■■□□ 2.66
REPS1-203ENST00000409812 ABCC9O60706 1549 aa31.59■■■□□ 2.65
REPS1-203ENST00000409812 LOC105371045A0A1W2PR82 267 aa31.56■■■□□ 2.64
REPS1-203ENST00000409812 SCRIBQ14160 1630 aa31.4■■■□□ 2.62
REPS1-203ENST00000409812 RSF1Q96T23 1441 aaPredicted RBP31.35■■■□□ 2.61
REPS1-203ENST00000409812 NACADO15069 1562 aa31.22■■■□□ 2.59
REPS1-203ENST00000409812 PPARGC1BQ86YN6 1023 aaKnown RBP31.2■■■□□ 2.59
REPS1-203ENST00000409812 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
REPS1-203ENST00000409812 TRIM26Q12899 539 aaPredicted RBP31■■■□□ 2.55
REPS1-203ENST00000409812 TRIM41Q8WV44 630 aa30.95■■■□□ 2.54
REPS1-203ENST00000409812 CECR2Q9BXF3 1484 aa30.83■■■□□ 2.53
REPS1-203ENST00000409812 FAM9AQ8IZU1 332 aaPredicted RBP30.74■■■□□ 2.51
REPS1-203ENST00000409812 MROH2BQ7Z745 1585 aa30.73■■■□□ 2.51
REPS1-203ENST00000409812 EHMT2Q96KQ7 1210 aa30.62■■■□□ 2.49
REPS1-203ENST00000409812 WIZO95785 1651 aa30.56■■■□□ 2.48
REPS1-203ENST00000409812 BAZ1AQ9NRL2 1556 aaPredicted RBP30.37■■■□□ 2.45
REPS1-203ENST00000409812 ZEB1P37275 1124 aaPredicted RBP30.36■■■□□ 2.45
REPS1-203ENST00000409812 EIF4G1Q04637 1599 aaKnown RBP30.28■■■□□ 2.44
REPS1-203ENST00000409812 UNC13AQ9UPW8 1703 aa30.22■■■□□ 2.43
REPS1-203ENST00000409812 SMARCA4P51532 1647 aa30.06■■■□□ 2.4
REPS1-203ENST00000409812 TOP2AP11388 1531 aaKnown RBP30.06■■■□□ 2.4
REPS1-203ENST00000409812 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
REPS1-203ENST00000409812 CCDC88BA6NC98 1476 aa29.98■■■□□ 2.39
REPS1-203ENST00000409812 SMARCA2P51531 1590 aa29.93■■■□□ 2.38
REPS1-203ENST00000409812 BICRAQ9NZM4 1560 aa29.83■■■□□ 2.37
REPS1-203ENST00000409812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.76■■■□□ 2.35
REPS1-203ENST00000409812 SOGA1O94964 1423 aa29.76■■■□□ 2.35
REPS1-203ENST00000409812 WRNQ14191 1432 aaPredicted RBP eCLIP29.71■■■□□ 2.35
REPS1-203ENST00000409812 CEP162Q5TB80 1403 aa29.69■■■□□ 2.34
REPS1-203ENST00000409812 PABPN1Q86U42 306 aaKnown RBP eCLIP29.65■■■□□ 2.34
REPS1-203ENST00000409812 CCER1Q8TC90 406 aaPredicted RBP29.64■■■□□ 2.34
REPS1-203ENST00000409812 RUSC2Q8N2Y8 1516 aa29.62■■■□□ 2.33
REPS1-203ENST00000409812 TNIKQ9UKE5 1360 aa29.62■■■□□ 2.33
REPS1-203ENST00000409812 PEG3Q9GZU2 1588 aa29.61■■■□□ 2.33
REPS1-203ENST00000409812 TTBK1Q5TCY1 1321 aaPredicted RBP29.59■■■□□ 2.33
REPS1-203ENST00000409812 CSRNP3Q8WYN3 585 aa29.56■■■□□ 2.32
REPS1-203ENST00000409812 EEA1Q15075 1411 aa29.54■■■□□ 2.32
REPS1-203ENST00000409812 SCAF1Q9H7N4 1312 aaKnown RBP29.5■■■□□ 2.31
REPS1-203ENST00000409812 UBTFP17480 764 aaKnown RBP29.44■■■□□ 2.3
REPS1-203ENST00000409812 GOLGA3Q08378 1498 aa29.39■■■□□ 2.3
REPS1-203ENST00000409812 ATAD2BQ9ULI0 1458 aa29.3■■■□□ 2.28
REPS1-203ENST00000409812 SYNJ1O43426 1573 aa29.29■■■□□ 2.28
REPS1-203ENST00000409812 CEP164Q9UPV0 1460 aa29.2■■■□□ 2.26
REPS1-203ENST00000409812 DIEXFQ68CQ4 756 aaKnown RBP29.2■■■□□ 2.26
REPS1-203ENST00000409812 BAZ1BQ9UIG0 1483 aaKnown RBP29.19■■■□□ 2.26
REPS1-203ENST00000409812 KIF21BO75037 1637 aa29.17■■■□□ 2.26
REPS1-203ENST00000409812 ACIN1Q9UKV3 1341 aaKnown RBP29.11■■■□□ 2.25
REPS1-203ENST00000409812 NEUROD1Q13562 356 aa29.09■■■□□ 2.25
REPS1-203ENST00000409812 CLIP1P30622 1438 aa29.08■■■□□ 2.25
REPS1-203ENST00000409812 RAPGEF2Q9Y4G8 1499 aa29.01■■■□□ 2.23
REPS1-203ENST00000409812 VPS8Q8N3P4 1428 aa28.98■■■□□ 2.23
REPS1-203ENST00000409812 PELP1Q8IZL8 1130 aaKnown RBP28.97■■■□□ 2.23
REPS1-203ENST00000409812 HNRNPUL2Q1KMD3 747 aaKnown RBP28.95■■■□□ 2.22
REPS1-203ENST00000409812 ZNF316A6NFI3 1004 aaPredicted RBP28.93■■■□□ 2.22
REPS1-203ENST00000409812 RANGAP1P46060 587 aaPredicted RBP28.9■■■□□ 2.22
REPS1-203ENST00000409812 TOP2BQ02880 1626 aa28.88■■■□□ 2.21
REPS1-203ENST00000409812 HMGXB3Q12766 1538 aa28.87■■■□□ 2.21
REPS1-203ENST00000409812 NCAPD3P42695 1498 aa28.84■■■□□ 2.21
REPS1-203ENST00000409812 CENPBP07199 599 aaPredicted RBP28.83■■■□□ 2.21
REPS1-203ENST00000409812 GTF3C3Q9Y5Q9 886 aa28.78■■■□□ 2.2
REPS1-203ENST00000409812 APLP2Q06481 763 aa28.77■■■□□ 2.2
REPS1-203ENST00000409812 BIVM-ERCC5R4GMW8 1640 aa28.76■■■□□ 2.19
REPS1-203ENST00000409812 PRXQ9BXM0 1461 aa28.69■■■□□ 2.18
REPS1-203ENST00000409812 ERICH3Q5RHP9 1530 aa28.66■■■□□ 2.18
REPS1-203ENST00000409812 ARAP1Q96P48 1450 aa28.62■■■□□ 2.17
REPS1-203ENST00000409812 CUX1P39880 1505 aa28.59■■■□□ 2.17
REPS1-203ENST00000409812 MIER1Q8N108 512 aa28.59■■■□□ 2.17
REPS1-203ENST00000409812 YTHDC1Q96MU7 727 aaKnown RBP28.53■■■□□ 2.16
REPS1-203ENST00000409812 KANK4Q5T7N3 995 aaPredicted RBP28.52■■■□□ 2.16
REPS1-203ENST00000409812 CFTRP13569 1480 aa28.52■■■□□ 2.16
REPS1-203ENST00000409812 KIF27Q86VH2 1401 aa28.46■■■□□ 2.15
REPS1-203ENST00000409812 DHX57Q6P158 1386 aaKnown RBP28.44■■■□□ 2.14
REPS1-203ENST00000409812 PRDM2Q13029 1718 aa28.42■■■□□ 2.14
REPS1-203ENST00000409812 CLSPNQ9HAW4 1339 aa28.38■■■□□ 2.13
REPS1-203ENST00000409812 RRBP1Q9P2E9 1410 aaKnown RBP28.35■■■□□ 2.13
REPS1-203ENST00000409812 ARHGAP35Q9NRY4 1499 aa28.33■■■□□ 2.13
REPS1-203ENST00000409812 CUX2O14529 1486 aa28.22■■■□□ 2.11
REPS1-203ENST00000409812 CCNB3Q8WWL7 1395 aa28.21■■■□□ 2.11
REPS1-203ENST00000409812 CADPSQ9ULU8 1353 aa28.2■■■□□ 2.11
REPS1-203ENST00000409812 IGF1RP08069 1367 aa28.19■■■□□ 2.1
REPS1-203ENST00000409812 CC2D2AQ9P2K1 1620 aa28.15■■■□□ 2.1
REPS1-203ENST00000409812 ITGAEP38570 1179 aa28.1■■■□□ 2.09
REPS1-203ENST00000409812 CARMIL1Q5VZK9 1371 aa28.04■■■□□ 2.08
REPS1-203ENST00000409812 TIAM1Q13009 1591 aa28.03■■■□□ 2.08
REPS1-203ENST00000409812 FGD5Q6ZNL6 1462 aa28.03■■■□□ 2.08
REPS1-203ENST00000409812 RAB3GAP2Q9H2M9 1393 aa28■■■□□ 2.07
REPS1-203ENST00000409812 MAP3K1Q13233 1512 aa27.99■■■□□ 2.07
REPS1-203ENST00000409812 MAPKBP1O60336 1514 aa27.95■■■□□ 2.07
REPS1-203ENST00000409812 LRRC9Q6ZRR7 1453 aa27.94■■■□□ 2.06
REPS1-203ENST00000409812 PHLDB1Q86UU1 1377 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms