RNA–Protein interactions for RNA: ENST00000375050.5

PBX2-201, Transcript of PBX homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PBX2, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX2-201ENST00000375050 NISCHQ9Y2I1 1504 aa34.24■■■■□ 3.07
PBX2-201ENST00000375050 SHROOM4Q9ULL8 1493 aa30.14■■■□□ 2.42
PBX2-201ENST00000375050 DCAF8L2P0C7V8 631 aa29.99■■■□□ 2.39
PBX2-201ENST00000375050 SUPT5HO00267 1087 aaKnown RBP29.8■■■□□ 2.36
PBX2-201ENST00000375050 MYO15BQ96JP2 1530 aa29.09■■■□□ 2.25
PBX2-201ENST00000375050 CHIC1Q5VXU3 224 aa29.02■■■□□ 2.24
PBX2-201ENST00000375050 HRCP23327 699 aa29.01■■■□□ 2.24
PBX2-201ENST00000375050 ZCCHC6Q5VYS8 1495 aaKnown RBP29.01■■■□□ 2.24
PBX2-201ENST00000375050 PCGF6Q9BYE7 350 aa28.86■■■□□ 2.21
PBX2-201ENST00000375050 PPARGC1BQ86YN6 1023 aaKnown RBP28.65■■■□□ 2.18
PBX2-201ENST00000375050 CCDC180Q9P1Z9 1646 aa28.57■■■□□ 2.16
PBX2-201ENST00000375050 LOC105371045A0A1W2PR82 267 aa28.43■■■□□ 2.14
PBX2-201ENST00000375050 DCAF1Q9Y4B6 1507 aa28.12■■■□□ 2.09
PBX2-201ENST00000375050 PELP1Q8IZL8 1130 aaKnown RBP28.09■■■□□ 2.09
PBX2-201ENST00000375050 ABCC9O60706 1549 aa28.01■■■□□ 2.07
PBX2-201ENST00000375050 TRIM26Q12899 539 aaPredicted RBP27.93■■■□□ 2.06
PBX2-201ENST00000375050 EHMT2Q96KQ7 1210 aa27.64■■■□□ 2.02
PBX2-201ENST00000375050 FAM9AQ8IZU1 332 aaPredicted RBP27.61■■■□□ 2.01
PBX2-201ENST00000375050 SCRIBQ14160 1630 aa27.6■■■□□ 2.01
PBX2-201ENST00000375050 TRIM41Q8WV44 630 aa27.53■■■□□ 2
PBX2-201ENST00000375050 RSF1Q96T23 1441 aaPredicted RBP27.43■■□□□ 1.98
PBX2-201ENST00000375050 ZEB1P37275 1124 aaPredicted RBP27.39■■□□□ 1.97
PBX2-201ENST00000375050 MYT1Q01538 1121 aa27.33■■□□□ 1.97
PBX2-201ENST00000375050 RB1CC1Q8TDY2 1594 aa27.25■■□□□ 1.95
PBX2-201ENST00000375050 SCAF1Q9H7N4 1312 aaKnown RBP27.21■■□□□ 1.95
PBX2-201ENST00000375050 PABPN1Q86U42 306 aaKnown RBP eCLIP27.12■■□□□ 1.93
PBX2-201ENST00000375050 CECR2Q9BXF3 1484 aa27.01■■□□□ 1.92
PBX2-201ENST00000375050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.96■■□□□ 1.91
PBX2-201ENST00000375050 CCER1Q8TC90 406 aaPredicted RBP26.82■■□□□ 1.88
PBX2-201ENST00000375050 MROH2BQ7Z745 1585 aa26.79■■□□□ 1.88
PBX2-201ENST00000375050 TTBK1Q5TCY1 1321 aaPredicted RBP26.78■■□□□ 1.88
PBX2-201ENST00000375050 NACADO15069 1562 aa26.72■■□□□ 1.87
PBX2-201ENST00000375050 NEUROD1Q13562 356 aa26.7■■□□□ 1.86
PBX2-201ENST00000375050 WIZO95785 1651 aa26.68■■□□□ 1.86
PBX2-201ENST00000375050 ACIN1Q9UKV3 1341 aaKnown RBP26.65■■□□□ 1.86
PBX2-201ENST00000375050 DIEXFQ68CQ4 756 aaKnown RBP26.56■■□□□ 1.84
PBX2-201ENST00000375050 GTF3C3Q9Y5Q9 886 aa26.48■■□□□ 1.83
PBX2-201ENST00000375050 ABCC8Q09428 1581 aa26.38■■□□□ 1.81
PBX2-201ENST00000375050 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
PBX2-201ENST00000375050 BAZ1AQ9NRL2 1556 aaPredicted RBP26.34■■□□□ 1.81
PBX2-201ENST00000375050 EIF4G1Q04637 1599 aaKnown RBP26.33■■□□□ 1.81
PBX2-201ENST00000375050 CENPBP07199 599 aaPredicted RBP26.33■■□□□ 1.8
PBX2-201ENST00000375050 CEP162Q5TB80 1403 aa26.29■■□□□ 1.8
PBX2-201ENST00000375050 SOGA1O94964 1423 aa26.27■■□□□ 1.8
PBX2-201ENST00000375050 RANGAP1P46060 587 aaPredicted RBP26.22■■□□□ 1.79
PBX2-201ENST00000375050 UBTFP17480 764 aaKnown RBP26.22■■□□□ 1.79
PBX2-201ENST00000375050 WRNQ14191 1432 aaPredicted RBP eCLIP26.22■■□□□ 1.79
PBX2-201ENST00000375050 YTHDC1Q96MU7 727 aaKnown RBP26.19■■□□□ 1.78
PBX2-201ENST00000375050 RUSC2Q8N2Y8 1516 aa26.15■■□□□ 1.78
PBX2-201ENST00000375050 ZNF316A6NFI3 1004 aaPredicted RBP26.14■■□□□ 1.78
PBX2-201ENST00000375050 CSRNP3Q8WYN3 585 aa26.11■■□□□ 1.77
PBX2-201ENST00000375050 TNIKQ9UKE5 1360 aa26.11■■□□□ 1.77
PBX2-201ENST00000375050 TOP2AP11388 1531 aaKnown RBP26.06■■□□□ 1.76
PBX2-201ENST00000375050 HNRNPUL2Q1KMD3 747 aaKnown RBP26.05■■□□□ 1.76
PBX2-201ENST00000375050 SMARCA2P51531 1590 aa26.02■■□□□ 1.76
PBX2-201ENST00000375050 MIER1Q8N108 512 aa25.99■■□□□ 1.75
PBX2-201ENST00000375050 UNC13AQ9UPW8 1703 aa25.99■■□□□ 1.75
PBX2-201ENST00000375050 PRKCSHP14314 528 aaPredicted RBP25.95■■□□□ 1.75
PBX2-201ENST00000375050 SMARCA4P51532 1647 aa25.94■■□□□ 1.74
PBX2-201ENST00000375050 GOLGA3Q08378 1498 aa25.85■■□□□ 1.73
PBX2-201ENST00000375050 EEA1Q15075 1411 aa25.83■■□□□ 1.73
PBX2-201ENST00000375050 BCL11AQ9H165 835 aa25.82■■□□□ 1.72
PBX2-201ENST00000375050 BICRAQ9NZM4 1560 aa25.82■■□□□ 1.72
PBX2-201ENST00000375050 CLIP1P30622 1438 aa25.68■■□□□ 1.7
PBX2-201ENST00000375050 APLP2Q06481 763 aa25.64■■□□□ 1.69
PBX2-201ENST00000375050 CEP164Q9UPV0 1460 aa25.62■■□□□ 1.69
PBX2-201ENST00000375050 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
PBX2-201ENST00000375050 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
PBX2-201ENST00000375050 VPS8Q8N3P4 1428 aa25.56■■□□□ 1.68
PBX2-201ENST00000375050 ATAD2BQ9ULI0 1458 aa25.54■■□□□ 1.68
PBX2-201ENST00000375050 RAPGEF2Q9Y4G8 1499 aa25.54■■□□□ 1.68
PBX2-201ENST00000375050 KIF21BO75037 1637 aa25.49■■□□□ 1.67
PBX2-201ENST00000375050 DHX57Q6P158 1386 aaKnown RBP25.36■■□□□ 1.65
PBX2-201ENST00000375050 KANK4Q5T7N3 995 aaPredicted RBP25.36■■□□□ 1.65
PBX2-201ENST00000375050 SUPT16HQ9Y5B9 1047 aaKnown RBP25.3■■□□□ 1.64
PBX2-201ENST00000375050 PEG3Q9GZU2 1588 aa25.24■■□□□ 1.63
PBX2-201ENST00000375050 ITGAEP38570 1179 aa25.24■■□□□ 1.63
PBX2-201ENST00000375050 CLSPNQ9HAW4 1339 aa25.2■■□□□ 1.62
PBX2-201ENST00000375050 KCNH8Q96L42 1107 aa25.17■■□□□ 1.62
PBX2-201ENST00000375050 ARAP1Q96P48 1450 aa25.17■■□□□ 1.62
PBX2-201ENST00000375050 ATP1B4Q9UN42 357 aaPredicted RBP25.12■■□□□ 1.61
PBX2-201ENST00000375050 DNAJC5BQ9UF47 199 aa25.1■■□□□ 1.61
PBX2-201ENST00000375050 TOP2BQ02880 1626 aa25.09■■□□□ 1.61
PBX2-201ENST00000375050 ERICH6Q7L0X2 663 aa25.06■■□□□ 1.6
PBX2-201ENST00000375050 PRXQ9BXM0 1461 aa25.06■■□□□ 1.6
PBX2-201ENST00000375050 P3H3Q8IVL6 736 aa25.05■■□□□ 1.6
PBX2-201ENST00000375050 TSHZ2Q9NRE2 1034 aa25.04■■□□□ 1.6
PBX2-201ENST00000375050 RRBP1Q9P2E9 1410 aaKnown RBP25.01■■□□□ 1.59
PBX2-201ENST00000375050 BCANQ96GW7 911 aa24.99■■□□□ 1.59
PBX2-201ENST00000375050 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
PBX2-201ENST00000375050 ERICH3Q5RHP9 1530 aa24.97■■□□□ 1.59
PBX2-201ENST00000375050 BIVM-ERCC5R4GMW8 1640 aa24.91■■□□□ 1.58
PBX2-201ENST00000375050 NCAPD3P42695 1498 aa24.91■■□□□ 1.58
PBX2-201ENST00000375050 RAB3GAP2Q9H2M9 1393 aa24.9■■□□□ 1.58
PBX2-201ENST00000375050 DDX10Q13206 875 aaKnown RBP24.89■■□□□ 1.57
PBX2-201ENST00000375050 ARHGAP35Q9NRY4 1499 aa24.88■■□□□ 1.57
PBX2-201ENST00000375050 SIN3AQ96ST3 1273 aa24.87■■□□□ 1.57
PBX2-201ENST00000375050 CUX1P39880 1505 aa24.86■■□□□ 1.57
PBX2-201ENST00000375050 CUX2O14529 1486 aa24.85■■□□□ 1.57
PBX2-201ENST00000375050 KIF27Q86VH2 1401 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms