RNA–Protein interactions for RNA: ENST00000527011.5

VAV3-210, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene VAV3, Length 4,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-210ENST00000527011 NISCHQ9Y2I1 1504 aa28.14■■■□□ 2.1
VAV3-210ENST00000527011 SUPT5HO00267 1087 aaKnown RBP27.57■■■□□ 2
VAV3-210ENST00000527011 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.94
VAV3-210ENST00000527011 PCGF6Q9BYE7 350 aa27.14■■□□□ 1.93
VAV3-210ENST00000527011 DCAF8L2P0C7V8 631 aa27.01■■□□□ 1.91
VAV3-210ENST00000527011 HRCP23327 699 aa26.78■■□□□ 1.88
VAV3-210ENST00000527011 PELP1Q8IZL8 1130 aaKnown RBP26.73■■□□□ 1.87
VAV3-210ENST00000527011 PPARGC1BQ86YN6 1023 aaKnown RBP26.5■■□□□ 1.83
VAV3-210ENST00000527011 EHMT2Q96KQ7 1210 aa26.27■■□□□ 1.8
VAV3-210ENST00000527011 ZEB1P37275 1124 aaPredicted RBP25.97■■□□□ 1.75
VAV3-210ENST00000527011 MYT1Q01538 1121 aa25.95■■□□□ 1.74
VAV3-210ENST00000527011 CENPBP07199 599 aaPredicted RBP25.84■■□□□ 1.73
VAV3-210ENST00000527011 FAM9AQ8IZU1 332 aaPredicted RBP25.83■■□□□ 1.73
VAV3-210ENST00000527011 CHIC1Q5VXU3 224 aa25.79■■□□□ 1.72
VAV3-210ENST00000527011 TRIM26Q12899 539 aaPredicted RBP25.77■■□□□ 1.72
VAV3-210ENST00000527011 LOC105371045A0A1W2PR82 267 aa25.73■■□□□ 1.71
VAV3-210ENST00000527011 CCER1Q8TC90 406 aaPredicted RBP25.59■■□□□ 1.69
VAV3-210ENST00000527011 TTBK1Q5TCY1 1321 aaPredicted RBP25.57■■□□□ 1.68
VAV3-210ENST00000527011 YTHDC1Q96MU7 727 aaKnown RBP25.5■■□□□ 1.67
VAV3-210ENST00000527011 TRIM41Q8WV44 630 aa25.29■■□□□ 1.64
VAV3-210ENST00000527011 GTF3C3Q9Y5Q9 886 aa25.23■■□□□ 1.63
VAV3-210ENST00000527011 SCAF1Q9H7N4 1312 aaKnown RBP25.22■■□□□ 1.63
VAV3-210ENST00000527011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.04■■□□□ 1.6
VAV3-210ENST00000527011 DIEXFQ68CQ4 756 aaKnown RBP25.04■■□□□ 1.6
VAV3-210ENST00000527011 ACIN1Q9UKV3 1341 aaKnown RBP25.03■■□□□ 1.6
VAV3-210ENST00000527011 NEUROD1Q13562 356 aa24.83■■□□□ 1.57
VAV3-210ENST00000527011 MYO15BQ96JP2 1530 aa24.79■■□□□ 1.56
VAV3-210ENST00000527011 APLP2Q06481 763 aa24.74■■□□□ 1.55
VAV3-210ENST00000527011 ERICH6Q7L0X2 663 aa24.68■■□□□ 1.54
VAV3-210ENST00000527011 DCAF1Q9Y4B6 1507 aa24.61■■□□□ 1.53
VAV3-210ENST00000527011 RANGAP1P46060 587 aaPredicted RBP24.53■■□□□ 1.52
VAV3-210ENST00000527011 UBTFP17480 764 aaKnown RBP24.5■■□□□ 1.51
VAV3-210ENST00000527011 NEFLP07196 543 aa24.44■■□□□ 1.5
VAV3-210ENST00000527011 HNRNPUL2Q1KMD3 747 aaKnown RBP24.41■■□□□ 1.5
VAV3-210ENST00000527011 ZNF316A6NFI3 1004 aaPredicted RBP24.33■■□□□ 1.48
VAV3-210ENST00000527011 BCANQ96GW7 911 aa24.24■■□□□ 1.47
VAV3-210ENST00000527011 MIER1Q8N108 512 aa23.99■■□□□ 1.43
VAV3-210ENST00000527011 CCDC180Q9P1Z9 1646 aa23.97■■□□□ 1.43
VAV3-210ENST00000527011 ITGAEP38570 1179 aa23.92■■□□□ 1.42
VAV3-210ENST00000527011 ANP32EQ9BTT0 268 aa23.75■■□□□ 1.39
VAV3-210ENST00000527011 BCL11AQ9H165 835 aa23.71■■□□□ 1.39
VAV3-210ENST00000527011 FKBP8Q14318 412 aa23.69■■□□□ 1.38
VAV3-210ENST00000527011 ATP1B4Q9UN42 357 aaPredicted RBP23.68■■□□□ 1.38
VAV3-210ENST00000527011 ZCCHC6Q5VYS8 1495 aaKnown RBP23.63■■□□□ 1.37
VAV3-210ENST00000527011 CLSPNQ9HAW4 1339 aa23.62■■□□□ 1.37
VAV3-210ENST00000527011 CDK11AQ9UQ88 783 aaPredicted RBP23.54■■□□□ 1.36
VAV3-210ENST00000527011 RTL5Q5HYW3 569 aaPredicted RBP23.52■■□□□ 1.36
VAV3-210ENST00000527011 SUPT16HQ9Y5B9 1047 aaKnown RBP23.51■■□□□ 1.35
VAV3-210ENST00000527011 CNGB1Q14028 1251 aaPredicted RBP23.44■■□□□ 1.34
VAV3-210ENST00000527011 ANP32CO43423 234 aa23.37■■□□□ 1.33
VAV3-210ENST00000527011 CSRNP3Q8WYN3 585 aa23.37■■□□□ 1.33
VAV3-210ENST00000527011 TRIM52Q96A61 297 aa23.34■■□□□ 1.33
VAV3-210ENST00000527011 DDX10Q13206 875 aaKnown RBP23.31■■□□□ 1.32
VAV3-210ENST00000527011 TSHZ2Q9NRE2 1034 aa23.29■■□□□ 1.32
VAV3-210ENST00000527011 POLR3GLQ9BT43 218 aa23.22■■□□□ 1.31
VAV3-210ENST00000527011 NBR1Q14596 966 aa23.22■■□□□ 1.31
VAV3-210ENST00000527011 DAXXQ9UER7 740 aaPredicted RBP23.18■■□□□ 1.3
VAV3-210ENST00000527011 IRX6P78412 446 aaPredicted RBP23.18■■□□□ 1.3
VAV3-210ENST00000527011 FAM50AQ14320 339 aaKnown RBP23.15■■□□□ 1.3
VAV3-210ENST00000527011 HNRNPUQ00839 825 aaKnown RBP eCLIP23.09■■□□□ 1.29
VAV3-210ENST00000527011 RBM19Q9Y4C8 960 aaKnown RBP23.09■■□□□ 1.29
VAV3-210ENST00000527011 HIRIP3Q9BW71 556 aaPredicted RBP23.06■■□□□ 1.28
VAV3-210ENST00000527011 EIF5BO60841 1220 aaKnown RBP23.05■■□□□ 1.28
VAV3-210ENST00000527011 MYT1LQ9UL68 1186 aa23.03■■□□□ 1.28
VAV3-210ENST00000527011 CEP162Q5TB80 1403 aa23.02■■□□□ 1.28
VAV3-210ENST00000527011 ANP32AP39687 249 aaKnown RBP23.01■■□□□ 1.27
VAV3-210ENST00000527011 RSF1Q96T23 1441 aaPredicted RBP23.01■■□□□ 1.27
VAV3-210ENST00000527011 NPM2Q86SE8 214 aaKnown RBP22.97■■□□□ 1.27
VAV3-210ENST00000527011 DEKP35659 375 aaKnown RBP22.83■■□□□ 1.24
VAV3-210ENST00000527011 FAM9BQ8IZU0 186 aa22.82■■□□□ 1.24
VAV3-210ENST00000527011 RTN4Q9NQC3 1192 aaKnown RBP22.82■■□□□ 1.24
VAV3-210ENST00000527011 ZBTB47Q9UFB7 747 aaPredicted RBP22.81■■□□□ 1.24
VAV3-210ENST00000527011 KCNH8Q96L42 1107 aa22.78■■□□□ 1.24
VAV3-210ENST00000527011 SCRIBQ14160 1630 aa22.77■■□□□ 1.24
VAV3-210ENST00000527011 CLIP1P30622 1438 aa22.72■■□□□ 1.23
VAV3-210ENST00000527011 TNIKQ9UKE5 1360 aa22.72■■□□□ 1.23
VAV3-210ENST00000527011 CCDC136Q96JN2 1154 aa22.7■■□□□ 1.23
VAV3-210ENST00000527011 TONSLQ96HA7 1378 aa22.64■■□□□ 1.21
VAV3-210ENST00000527011 B4GALNT3Q6L9W6 998 aa22.61■■□□□ 1.21
VAV3-210ENST00000527011 NOP58Q9Y2X3 529 aaKnown RBP22.61■■□□□ 1.21
VAV3-210ENST00000527011 P3H3Q8IVL6 736 aa22.6■■□□□ 1.21
VAV3-210ENST00000527011 SIN3AQ96ST3 1273 aa22.59■■□□□ 1.21
VAV3-210ENST00000527011 RB1CC1Q8TDY2 1594 aa22.58■■□□□ 1.21
VAV3-210ENST00000527011 MRS2Q9HD23 443 aa22.57■■□□□ 1.2
VAV3-210ENST00000527011 ZNF326Q5BKZ1 582 aaKnown RBP22.57■■□□□ 1.2
VAV3-210ENST00000527011 SENP3-EIF4A1A0A087X0R7 540 aa22.55■■□□□ 1.2
VAV3-210ENST00000527011 ABCC9O60706 1549 aa22.54■■□□□ 1.2
VAV3-210ENST00000527011 PPP4R2Q9NY27 417 aa22.54■■□□□ 1.2
VAV3-210ENST00000527011 GOLGA3Q08378 1498 aa22.53■■□□□ 1.2
VAV3-210ENST00000527011 SOGA1O94964 1423 aa22.53■■□□□ 1.2
VAV3-210ENST00000527011 PABPN1Q86U42 306 aaKnown RBP eCLIP22.5■■□□□ 1.19
VAV3-210ENST00000527011 SALL2Q9Y467 1007 aaPredicted RBP22.48■■□□□ 1.19
VAV3-210ENST00000527011 LAS1LQ9Y4W2 734 aaKnown RBP22.47■■□□□ 1.19
VAV3-210ENST00000527011 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.46■■□□□ 1.19
VAV3-210ENST00000527011 EEA1Q15075 1411 aa22.42■■□□□ 1.18
VAV3-210ENST00000527011 NEFMP07197 916 aa22.4■■□□□ 1.18
VAV3-210ENST00000527011 CCER2I3L3R5 266 aa22.38■■□□□ 1.17
VAV3-210ENST00000527011 WRNQ14191 1432 aaPredicted RBP eCLIP22.35■■□□□ 1.17
VAV3-210ENST00000527011 ARXQ96QS3 562 aa22.35■■□□□ 1.17
VAV3-210ENST00000527011 PRKCSHP14314 528 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms