RNA–Protein interactions for RNA: ENST00000541944.5

PHKA1-205, Transcript of phosphorylase kinase regulatory subunit alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHKA1, Length 5,944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1-205ENST00000541944 DCAF8L2P0C7V8 631 aa29.08■■■□□ 2.25
PHKA1-205ENST00000541944 NISCHQ9Y2I1 1504 aa27.94■■■□□ 2.06
PHKA1-205ENST00000541944 SUPT5HO00267 1087 aaKnown RBP27.87■■■□□ 2.05
PHKA1-205ENST00000541944 SHROOM4Q9ULL8 1493 aa27.34■■□□□ 1.97
PHKA1-205ENST00000541944 EHMT2Q96KQ7 1210 aa26.9■■□□□ 1.9
PHKA1-205ENST00000541944 PELP1Q8IZL8 1130 aaKnown RBP26.41■■□□□ 1.82
PHKA1-205ENST00000541944 APLP2Q06481 763 aa26.39■■□□□ 1.82
PHKA1-205ENST00000541944 FAM9AQ8IZU1 332 aaPredicted RBP26.28■■□□□ 1.8
PHKA1-205ENST00000541944 PCGF6Q9BYE7 350 aa26.19■■□□□ 1.78
PHKA1-205ENST00000541944 TTBK1Q5TCY1 1321 aaPredicted RBP26.03■■□□□ 1.76
PHKA1-205ENST00000541944 TRIM41Q8WV44 630 aa25.81■■□□□ 1.72
PHKA1-205ENST00000541944 ZEB1P37275 1124 aaPredicted RBP25.76■■□□□ 1.71
PHKA1-205ENST00000541944 RANGAP1P46060 587 aaPredicted RBP25.68■■□□□ 1.7
PHKA1-205ENST00000541944 CENPBP07199 599 aaPredicted RBP25.66■■□□□ 1.7
PHKA1-205ENST00000541944 CCER1Q8TC90 406 aaPredicted RBP25.66■■□□□ 1.7
PHKA1-205ENST00000541944 UBTFP17480 764 aaKnown RBP25.46■■□□□ 1.67
PHKA1-205ENST00000541944 ATP1B4Q9UN42 357 aaPredicted RBP25.41■■□□□ 1.66
PHKA1-205ENST00000541944 ERICH6Q7L0X2 663 aa25.3■■□□□ 1.64
PHKA1-205ENST00000541944 PPARGC1BQ86YN6 1023 aaKnown RBP25.13■■□□□ 1.61
PHKA1-205ENST00000541944 YTHDC1Q96MU7 727 aaKnown RBP25.12■■□□□ 1.61
PHKA1-205ENST00000541944 TRIM26Q12899 539 aaPredicted RBP25.08■■□□□ 1.61
PHKA1-205ENST00000541944 NEFLP07196 543 aa25.05■■□□□ 1.6
PHKA1-205ENST00000541944 HRCP23327 699 aa24.9■■□□□ 1.58
PHKA1-205ENST00000541944 CHIC1Q5VXU3 224 aa24.82■■□□□ 1.56
PHKA1-205ENST00000541944 LOC105371045A0A1W2PR82 267 aa24.82■■□□□ 1.56
PHKA1-205ENST00000541944 MYT1Q01538 1121 aa24.68■■□□□ 1.54
PHKA1-205ENST00000541944 ITGAEP38570 1179 aa24.67■■□□□ 1.54
PHKA1-205ENST00000541944 HNRNPUL2Q1KMD3 747 aaKnown RBP24.58■■□□□ 1.52
PHKA1-205ENST00000541944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.47■■□□□ 1.51
PHKA1-205ENST00000541944 POLR3GLQ9BT43 218 aa24.43■■□□□ 1.5
PHKA1-205ENST00000541944 MYT1LQ9UL68 1186 aa24.31■■□□□ 1.48
PHKA1-205ENST00000541944 DAXXQ9UER7 740 aaPredicted RBP24.24■■□□□ 1.47
PHKA1-205ENST00000541944 DIEXFQ68CQ4 756 aaKnown RBP24.23■■□□□ 1.47
PHKA1-205ENST00000541944 CNGB1Q14028 1251 aaPredicted RBP24.21■■□□□ 1.47
PHKA1-205ENST00000541944 FAM50AQ14320 339 aaKnown RBP24.04■■□□□ 1.44
PHKA1-205ENST00000541944 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
PHKA1-205ENST00000541944 ABCC9O60706 1549 aa23.91■■□□□ 1.42
PHKA1-205ENST00000541944 TRIM52Q96A61 297 aa23.88■■□□□ 1.41
PHKA1-205ENST00000541944 NEUROD1Q13562 356 aa23.87■■□□□ 1.41
PHKA1-205ENST00000541944 SLC4A1APQ9BWU0 796 aaKnown RBP23.87■■□□□ 1.41
PHKA1-205ENST00000541944 CLSPNQ9HAW4 1339 aa23.76■■□□□ 1.39
PHKA1-205ENST00000541944 RTL5Q5HYW3 569 aaPredicted RBP23.75■■□□□ 1.39
PHKA1-205ENST00000541944 GTF3C3Q9Y5Q9 886 aa23.75■■□□□ 1.39
PHKA1-205ENST00000541944 ZNF316A6NFI3 1004 aaPredicted RBP23.71■■□□□ 1.39
PHKA1-205ENST00000541944 ANP32CO43423 234 aa23.68■■□□□ 1.38
PHKA1-205ENST00000541944 BCANQ96GW7 911 aa23.68■■□□□ 1.38
PHKA1-205ENST00000541944 ZNF326Q5BKZ1 582 aaKnown RBP23.61■■□□□ 1.37
PHKA1-205ENST00000541944 CSRNP3Q8WYN3 585 aa23.56■■□□□ 1.36
PHKA1-205ENST00000541944 CDK11AQ9UQ88 783 aaPredicted RBP23.49■■□□□ 1.35
PHKA1-205ENST00000541944 P3H3Q8IVL6 736 aa23.44■■□□□ 1.34
PHKA1-205ENST00000541944 ACIN1Q9UKV3 1341 aaKnown RBP23.44■■□□□ 1.34
PHKA1-205ENST00000541944 FBLN2P98095 1184 aa23.42■■□□□ 1.34
PHKA1-205ENST00000541944 ARID3CA6NKF2 412 aa23.31■■□□□ 1.32
PHKA1-205ENST00000541944 ZBTB47Q9UFB7 747 aaPredicted RBP23.24■■□□□ 1.31
PHKA1-205ENST00000541944 CANXP27824 592 aaKnown RBP23.22■■□□□ 1.31
PHKA1-205ENST00000541944 DCAF1Q9Y4B6 1507 aa23.21■■□□□ 1.31
PHKA1-205ENST00000541944 ZNF777Q9ULD5 760 aaPredicted RBP23.19■■□□□ 1.3
PHKA1-205ENST00000541944 SCRIBQ14160 1630 aa23.14■■□□□ 1.29
PHKA1-205ENST00000541944 ZCCHC6Q5VYS8 1495 aaKnown RBP23.13■■□□□ 1.29
PHKA1-205ENST00000541944 TONSLQ96HA7 1378 aa23.1■■□□□ 1.29
PHKA1-205ENST00000541944 NEFMP07197 916 aa23.09■■□□□ 1.29
PHKA1-205ENST00000541944 ANP32AP39687 249 aaKnown RBP23.08■■□□□ 1.29
PHKA1-205ENST00000541944 BCL11AQ9H165 835 aa23.05■■□□□ 1.28
PHKA1-205ENST00000541944 FKBP8Q14318 412 aa23.05■■□□□ 1.28
PHKA1-205ENST00000541944 DDX10Q13206 875 aaKnown RBP23.01■■□□□ 1.27
PHKA1-205ENST00000541944 SLC24A1O60721 1099 aa23.01■■□□□ 1.27
PHKA1-205ENST00000541944 HNRNPUQ00839 825 aaKnown RBP eCLIP22.98■■□□□ 1.27
PHKA1-205ENST00000541944 NPM2Q86SE8 214 aaKnown RBP22.97■■□□□ 1.27
PHKA1-205ENST00000541944 FAM9BQ8IZU0 186 aa22.91■■□□□ 1.26
PHKA1-205ENST00000541944 CHIC2Q9UKJ5 165 aa22.85■■□□□ 1.25
PHKA1-205ENST00000541944 CHGAP10645 457 aaKnown RBP22.8■■□□□ 1.24
PHKA1-205ENST00000541944 SALL2Q9Y467 1007 aaPredicted RBP22.76■■□□□ 1.23
PHKA1-205ENST00000541944 TMC1Q8TDI8 760 aa22.75■■□□□ 1.23
PHKA1-205ENST00000541944 CLIP1P30622 1438 aa22.74■■□□□ 1.23
PHKA1-205ENST00000541944 MIER1Q8N108 512 aa22.73■■□□□ 1.23
PHKA1-205ENST00000541944 MTUS2Q5JR59 1369 aa22.71■■□□□ 1.23
PHKA1-205ENST00000541944 CCDC136Q96JN2 1154 aa22.7■■□□□ 1.22
PHKA1-205ENST00000541944 ESF1Q9H501 851 aaKnown RBP22.69■■□□□ 1.22
PHKA1-205ENST00000541944 MRS2Q9HD23 443 aa22.69■■□□□ 1.22
PHKA1-205ENST00000541944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.68■■□□□ 1.22
PHKA1-205ENST00000541944 UPF2Q9HAU5 1272 aaKnown RBP22.68■■□□□ 1.22
PHKA1-205ENST00000541944 STAG3Q9UJ98 1225 aa22.68■■□□□ 1.22
PHKA1-205ENST00000541944 HSP90AA1P07900 732 aaKnown RBP22.66■■□□□ 1.22
PHKA1-205ENST00000541944 SCAF1Q9H7N4 1312 aaKnown RBP22.65■■□□□ 1.22
PHKA1-205ENST00000541944 MYO15BQ96JP2 1530 aa22.65■■□□□ 1.22
PHKA1-205ENST00000541944 CCDC180Q9P1Z9 1646 aa22.65■■□□□ 1.22
PHKA1-205ENST00000541944 TSPY4P0CV99 314 aa22.64■■□□□ 1.22
PHKA1-205ENST00000541944 TSPY10P0CW01 314 aa22.64■■□□□ 1.22
PHKA1-205ENST00000541944 HIRIP3Q9BW71 556 aaPredicted RBP22.63■■□□□ 1.21
PHKA1-205ENST00000541944 KDM2AQ9Y2K7 1162 aa22.63■■□□□ 1.21
PHKA1-205ENST00000541944 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.6■■□□□ 1.21
PHKA1-205ENST00000541944 NPM1P06748 294 aaKnown RBP eCLIP22.59■■□□□ 1.21
PHKA1-205ENST00000541944 WDR43Q15061 677 aaKnown RBP eCLIP22.59■■□□□ 1.21
PHKA1-205ENST00000541944 ANP32BQ92688 251 aaKnown RBP22.59■■□□□ 1.21
PHKA1-205ENST00000541944 CEP162Q5TB80 1403 aa22.56■■□□□ 1.2
PHKA1-205ENST00000541944 EIF4G2P78344 907 aaKnown RBP eCLIP22.56■■□□□ 1.2
PHKA1-205ENST00000541944 EEA1Q15075 1411 aa22.56■■□□□ 1.2
PHKA1-205ENST00000541944 GOLGA3Q08378 1498 aa22.55■■□□□ 1.2
PHKA1-205ENST00000541944 RSF1Q96T23 1441 aaPredicted RBP22.54■■□□□ 1.2
PHKA1-205ENST00000541944 IRX6P78412 446 aaPredicted RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms