RNA–Protein interactions for RNA: ENST00000539908.6

TJP3-201, Transcript of tight junction protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TJP3, Length 2,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TJP3-201ENST00000539908 NISCHQ9Y2I1 1504 aa36.18■■■■□ 3.38
TJP3-201ENST00000539908 SHROOM4Q9ULL8 1493 aa31.46■■■□□ 2.63
TJP3-201ENST00000539908 SUPT5HO00267 1087 aaKnown RBP30.88■■■□□ 2.53
TJP3-201ENST00000539908 DCAF8L2P0C7V8 631 aa30.75■■■□□ 2.51
TJP3-201ENST00000539908 ZCCHC6Q5VYS8 1495 aaKnown RBP30.54■■■□□ 2.48
TJP3-201ENST00000539908 CCDC180Q9P1Z9 1646 aa30.47■■■□□ 2.47
TJP3-201ENST00000539908 CHIC1Q5VXU3 224 aa29.77■■■□□ 2.36
TJP3-201ENST00000539908 MYO15BQ96JP2 1530 aa29.63■■■□□ 2.33
TJP3-201ENST00000539908 DCAF1Q9Y4B6 1507 aa29.4■■■□□ 2.3
TJP3-201ENST00000539908 LOC105371045A0A1W2PR82 267 aa29.14■■■□□ 2.25
TJP3-201ENST00000539908 PCGF6Q9BYE7 350 aa29.09■■■□□ 2.25
TJP3-201ENST00000539908 SCRIBQ14160 1630 aa29.01■■■□□ 2.24
TJP3-201ENST00000539908 HRCP23327 699 aa29■■■□□ 2.23
TJP3-201ENST00000539908 ABCC9O60706 1549 aa28.81■■■□□ 2.2
TJP3-201ENST00000539908 RSF1Q96T23 1441 aaPredicted RBP28.76■■■□□ 2.19
TJP3-201ENST00000539908 PPARGC1BQ86YN6 1023 aaKnown RBP28.66■■■□□ 2.18
TJP3-201ENST00000539908 FAM9AQ8IZU1 332 aaPredicted RBP28.64■■■□□ 2.17
TJP3-201ENST00000539908 EHMT2Q96KQ7 1210 aa28.62■■■□□ 2.17
TJP3-201ENST00000539908 TRIM41Q8WV44 630 aa28.59■■■□□ 2.17
TJP3-201ENST00000539908 PELP1Q8IZL8 1130 aaKnown RBP28.52■■■□□ 2.16
TJP3-201ENST00000539908 RB1CC1Q8TDY2 1594 aa28.47■■■□□ 2.15
TJP3-201ENST00000539908 CECR2Q9BXF3 1484 aa28.45■■■□□ 2.14
TJP3-201ENST00000539908 NACADO15069 1562 aa28.3■■■□□ 2.12
TJP3-201ENST00000539908 TRIM26Q12899 539 aaPredicted RBP28.27■■■□□ 2.12
TJP3-201ENST00000539908 MROH2BQ7Z745 1585 aa28.26■■■□□ 2.11
TJP3-201ENST00000539908 WIZO95785 1651 aa28.11■■■□□ 2.09
TJP3-201ENST00000539908 SCAF1Q9H7N4 1312 aaKnown RBP27.84■■■□□ 2.05
TJP3-201ENST00000539908 PABPN1Q86U42 306 aaKnown RBP eCLIP27.77■■■□□ 2.04
TJP3-201ENST00000539908 BAZ1AQ9NRL2 1556 aaPredicted RBP27.74■■■□□ 2.03
TJP3-201ENST00000539908 TTBK1Q5TCY1 1321 aaPredicted RBP27.64■■■□□ 2.02
TJP3-201ENST00000539908 ABCC8Q09428 1581 aa27.6■■■□□ 2.01
TJP3-201ENST00000539908 CCDC88BA6NC98 1476 aa27.56■■■□□ 2
TJP3-201ENST00000539908 SMARCA4P51532 1647 aa27.52■■■□□ 2
TJP3-201ENST00000539908 ZEB1P37275 1124 aaPredicted RBP27.52■■■□□ 2
TJP3-201ENST00000539908 TOP2AP11388 1531 aaKnown RBP27.49■■□□□ 1.99
TJP3-201ENST00000539908 UNC13AQ9UPW8 1703 aa27.49■■□□□ 1.99
TJP3-201ENST00000539908 MYT1Q01538 1121 aa27.46■■□□□ 1.99
TJP3-201ENST00000539908 EIF4G1Q04637 1599 aaKnown RBP27.46■■□□□ 1.99
TJP3-201ENST00000539908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.41■■□□□ 1.98
TJP3-201ENST00000539908 SMARCA2P51531 1590 aa27.4■■□□□ 1.98
TJP3-201ENST00000539908 SOGA1O94964 1423 aa27.38■■□□□ 1.97
TJP3-201ENST00000539908 UBTFP17480 764 aaKnown RBP27.32■■□□□ 1.96
TJP3-201ENST00000539908 RUSC2Q8N2Y8 1516 aa27.27■■□□□ 1.96
TJP3-201ENST00000539908 CCER1Q8TC90 406 aaPredicted RBP27.26■■□□□ 1.95
TJP3-201ENST00000539908 CSRNP3Q8WYN3 585 aa27.23■■□□□ 1.95
TJP3-201ENST00000539908 BICRAQ9NZM4 1560 aa27.19■■□□□ 1.94
TJP3-201ENST00000539908 CEP162Q5TB80 1403 aa27.17■■□□□ 1.94
TJP3-201ENST00000539908 RANGAP1P46060 587 aaPredicted RBP27.08■■□□□ 1.93
TJP3-201ENST00000539908 WRNQ14191 1432 aaPredicted RBP eCLIP27.03■■□□□ 1.92
TJP3-201ENST00000539908 TNIKQ9UKE5 1360 aa27.03■■□□□ 1.92
TJP3-201ENST00000539908 NEUROD1Q13562 356 aa26.91■■□□□ 1.9
TJP3-201ENST00000539908 ATAD2BQ9ULI0 1458 aa26.9■■□□□ 1.9
TJP3-201ENST00000539908 EEA1Q15075 1411 aa26.9■■□□□ 1.9
TJP3-201ENST00000539908 ACIN1Q9UKV3 1341 aaKnown RBP26.9■■□□□ 1.9
TJP3-201ENST00000539908 BAZ1BQ9UIG0 1483 aaKnown RBP26.87■■□□□ 1.89
TJP3-201ENST00000539908 GOLGA3Q08378 1498 aa26.87■■□□□ 1.89
TJP3-201ENST00000539908 SYNJ1O43426 1573 aa26.86■■□□□ 1.89
TJP3-201ENST00000539908 GTF3C3Q9Y5Q9 886 aa26.82■■□□□ 1.88
TJP3-201ENST00000539908 PEG3Q9GZU2 1588 aa26.8■■□□□ 1.88
TJP3-201ENST00000539908 HNRNPUL2Q1KMD3 747 aaKnown RBP26.8■■□□□ 1.88
TJP3-201ENST00000539908 CEP164Q9UPV0 1460 aa26.69■■□□□ 1.86
TJP3-201ENST00000539908 CLIP1P30622 1438 aa26.68■■□□□ 1.86
TJP3-201ENST00000539908 DIEXFQ68CQ4 756 aaKnown RBP26.66■■□□□ 1.86
TJP3-201ENST00000539908 RAPGEF2Q9Y4G8 1499 aa26.65■■□□□ 1.86
TJP3-201ENST00000539908 APLP2Q06481 763 aa26.64■■□□□ 1.85
TJP3-201ENST00000539908 KIF21BO75037 1637 aa26.52■■□□□ 1.84
TJP3-201ENST00000539908 VPS8Q8N3P4 1428 aa26.47■■□□□ 1.83
TJP3-201ENST00000539908 CENPBP07199 599 aaPredicted RBP26.44■■□□□ 1.82
TJP3-201ENST00000539908 TOP2BQ02880 1626 aa26.39■■□□□ 1.82
TJP3-201ENST00000539908 ZNF316A6NFI3 1004 aaPredicted RBP26.38■■□□□ 1.81
TJP3-201ENST00000539908 KANK4Q5T7N3 995 aaPredicted RBP26.3■■□□□ 1.8
TJP3-201ENST00000539908 YTHDC1Q96MU7 727 aaKnown RBP26.29■■□□□ 1.8
TJP3-201ENST00000539908 NCAPD3P42695 1498 aa26.28■■□□□ 1.8
TJP3-201ENST00000539908 CUX1P39880 1505 aa26.26■■□□□ 1.79
TJP3-201ENST00000539908 BIVM-ERCC5R4GMW8 1640 aa26.21■■□□□ 1.79
TJP3-201ENST00000539908 PRXQ9BXM0 1461 aa26.21■■□□□ 1.79
TJP3-201ENST00000539908 ITGAEP38570 1179 aa26.19■■□□□ 1.78
TJP3-201ENST00000539908 KIF27Q86VH2 1401 aa26.18■■□□□ 1.78
TJP3-201ENST00000539908 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
TJP3-201ENST00000539908 HMGXB3Q12766 1538 aa26.15■■□□□ 1.78
TJP3-201ENST00000539908 MIER1Q8N108 512 aa26.14■■□□□ 1.78
TJP3-201ENST00000539908 CFTRP13569 1480 aa26.11■■□□□ 1.77
TJP3-201ENST00000539908 ERICH3Q5RHP9 1530 aa26.08■■□□□ 1.76
TJP3-201ENST00000539908 CUX2O14529 1486 aa26.02■■□□□ 1.76
TJP3-201ENST00000539908 P3H3Q8IVL6 736 aa26.01■■□□□ 1.75
TJP3-201ENST00000539908 BCL11AQ9H165 835 aa26.01■■□□□ 1.75
TJP3-201ENST00000539908 ATP1B4Q9UN42 357 aaPredicted RBP25.99■■□□□ 1.75
TJP3-201ENST00000539908 ARHGAP35Q9NRY4 1499 aa25.95■■□□□ 1.75
TJP3-201ENST00000539908 IGF1RP08069 1367 aa25.94■■□□□ 1.74
TJP3-201ENST00000539908 DHX57Q6P158 1386 aaKnown RBP25.94■■□□□ 1.74
TJP3-201ENST00000539908 CADPSQ9ULU8 1353 aa25.92■■□□□ 1.74
TJP3-201ENST00000539908 CARMIL1Q5VZK9 1371 aa25.87■■□□□ 1.73
TJP3-201ENST00000539908 FGD5Q6ZNL6 1462 aa25.85■■□□□ 1.73
TJP3-201ENST00000539908 CCNB3Q8WWL7 1395 aa25.84■■□□□ 1.73
TJP3-201ENST00000539908 RRBP1Q9P2E9 1410 aaKnown RBP25.78■■□□□ 1.72
TJP3-201ENST00000539908 FAM50AQ14320 339 aaKnown RBP25.78■■□□□ 1.72
TJP3-201ENST00000539908 CC2D2AQ9P2K1 1620 aa25.72■■□□□ 1.71
TJP3-201ENST00000539908 RAD54L2Q9Y4B4 1467 aa25.71■■□□□ 1.71
TJP3-201ENST00000539908 CLSPNQ9HAW4 1339 aa25.7■■□□□ 1.71
TJP3-201ENST00000539908 FANCD2Q9BXW9 1451 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms