RNA–Protein interactions for RNA: ENST00000373034.8

PCDH19-202, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 9,756 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-202ENST00000373034 PELP1Q8IZL8 1130 aaKnown RBP25.58■■□□□ 1.69
PCDH19-202ENST00000373034 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
PCDH19-202ENST00000373034 MYT1Q01538 1121 aa24.37■■□□□ 1.49
PCDH19-202ENST00000373034 ERICH6Q7L0X2 663 aa24.37■■□□□ 1.49
PCDH19-202ENST00000373034 CCER1Q8TC90 406 aaPredicted RBP24.35■■□□□ 1.49
PCDH19-202ENST00000373034 SUPT5HO00267 1087 aaKnown RBP23.93■■□□□ 1.42
PCDH19-202ENST00000373034 CENPBP07199 599 aaPredicted RBP23.89■■□□□ 1.42
PCDH19-202ENST00000373034 APLP2Q06481 763 aa23.85■■□□□ 1.41
PCDH19-202ENST00000373034 FAM9AQ8IZU1 332 aaPredicted RBP23.55■■□□□ 1.36
PCDH19-202ENST00000373034 YTHDC1Q96MU7 727 aaKnown RBP23.48■■□□□ 1.35
PCDH19-202ENST00000373034 EHMT2Q96KQ7 1210 aa23.47■■□□□ 1.35
PCDH19-202ENST00000373034 NEFLP07196 543 aa23.46■■□□□ 1.35
PCDH19-202ENST00000373034 ZEB1P37275 1124 aaPredicted RBP23.43■■□□□ 1.34
PCDH19-202ENST00000373034 DAXXQ9UER7 740 aaPredicted RBP23.18■■□□□ 1.3
PCDH19-202ENST00000373034 PCGF6Q9BYE7 350 aa23.13■■□□□ 1.29
PCDH19-202ENST00000373034 SHROOM4Q9ULL8 1493 aa23.1■■□□□ 1.29
PCDH19-202ENST00000373034 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
PCDH19-202ENST00000373034 RTL5Q5HYW3 569 aaPredicted RBP22.63■■□□□ 1.21
PCDH19-202ENST00000373034 ZNF316A6NFI3 1004 aaPredicted RBP22.55■■□□□ 1.2
PCDH19-202ENST00000373034 ATP1B4Q9UN42 357 aaPredicted RBP22.51■■□□□ 1.19
PCDH19-202ENST00000373034 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
PCDH19-202ENST00000373034 RANGAP1P46060 587 aaPredicted RBP22.4■■□□□ 1.18
PCDH19-202ENST00000373034 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
PCDH19-202ENST00000373034 UBTFP17480 764 aaKnown RBP22.26■■□□□ 1.15
PCDH19-202ENST00000373034 CLSPNQ9HAW4 1339 aa22.21■■□□□ 1.15
PCDH19-202ENST00000373034 TRIM26Q12899 539 aaPredicted RBP22.07■■□□□ 1.12
PCDH19-202ENST00000373034 POLR3GLQ9BT43 218 aa22.03■■□□□ 1.12
PCDH19-202ENST00000373034 HRCP23327 699 aa21.98■■□□□ 1.11
PCDH19-202ENST00000373034 GLIPR1L2Q4G1C9 344 aa21.88■■□□□ 1.09
PCDH19-202ENST00000373034 MYT1LQ9UL68 1186 aa21.79■■□□□ 1.08
PCDH19-202ENST00000373034 ZBTB47Q9UFB7 747 aaPredicted RBP21.78■■□□□ 1.08
PCDH19-202ENST00000373034 SLC4A1APQ9BWU0 796 aaKnown RBP21.77■■□□□ 1.08
PCDH19-202ENST00000373034 CDK11AQ9UQ88 783 aaPredicted RBP21.77■■□□□ 1.07
PCDH19-202ENST00000373034 DIEXFQ68CQ4 756 aaKnown RBP21.69■■□□□ 1.06
PCDH19-202ENST00000373034 ANP32BQ92688 251 aaKnown RBP21.68■■□□□ 1.06
PCDH19-202ENST00000373034 PPARGC1BQ86YN6 1023 aaKnown RBP21.65■■□□□ 1.06
PCDH19-202ENST00000373034 CNGB1Q14028 1251 aaPredicted RBP21.65■■□□□ 1.06
PCDH19-202ENST00000373034 ITGAEP38570 1179 aa21.63■■□□□ 1.05
PCDH19-202ENST00000373034 EIF5BO60841 1220 aaKnown RBP21.57■■□□□ 1.04
PCDH19-202ENST00000373034 ANP32AP39687 249 aaKnown RBP21.56■■□□□ 1.04
PCDH19-202ENST00000373034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.54■■□□□ 1.04
PCDH19-202ENST00000373034 HNRNPUL2Q1KMD3 747 aaKnown RBP21.54■■□□□ 1.04
PCDH19-202ENST00000373034 CANXP27824 592 aaKnown RBP21.4■■□□□ 1.02
PCDH19-202ENST00000373034 GTF3C3Q9Y5Q9 886 aa21.39■■□□□ 1.01
PCDH19-202ENST00000373034 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
PCDH19-202ENST00000373034 ANP32CO43423 234 aa21.38■■□□□ 1.01
PCDH19-202ENST00000373034 BCANQ96GW7 911 aa21.35■■□□□ 1.01
PCDH19-202ENST00000373034 HSP90AA1P07900 732 aaKnown RBP21.28■■□□□ 1
PCDH19-202ENST00000373034 NEFMP07197 916 aa21.26■□□□□ 0.99
PCDH19-202ENST00000373034 UPF2Q9HAU5 1272 aaKnown RBP21.2■□□□□ 0.99
PCDH19-202ENST00000373034 SLC24A1O60721 1099 aa21.17■□□□□ 0.98
PCDH19-202ENST00000373034 BCL11AQ9H165 835 aa21.11■□□□□ 0.97
PCDH19-202ENST00000373034 NPM2Q86SE8 214 aaKnown RBP21.09■□□□□ 0.97
PCDH19-202ENST00000373034 FAM50AQ14320 339 aaKnown RBP21.07■□□□□ 0.96
PCDH19-202ENST00000373034 TRIM52Q96A61 297 aa21.06■□□□□ 0.96
PCDH19-202ENST00000373034 TNNT2P45379 298 aaPredicted RBP21.06■□□□□ 0.96
PCDH19-202ENST00000373034 NEUROD1Q13562 356 aa21.02■□□□□ 0.96
PCDH19-202ENST00000373034 CDK11BP21127 795 aaKnown RBP21■□□□□ 0.95
PCDH19-202ENST00000373034 ACIN1Q9UKV3 1341 aaKnown RBP20.92■□□□□ 0.94
PCDH19-202ENST00000373034 LOC105371045A0A1W2PR82 267 aa20.91■□□□□ 0.94
PCDH19-202ENST00000373034 ZNF326Q5BKZ1 582 aaKnown RBP20.89■□□□□ 0.93
PCDH19-202ENST00000373034 NBR1Q14596 966 aa20.82■□□□□ 0.92
PCDH19-202ENST00000373034 TRIM44Q96DX7 344 aaPredicted RBP20.81■□□□□ 0.92
PCDH19-202ENST00000373034 ANP32EQ9BTT0 268 aa20.8■□□□□ 0.92
PCDH19-202ENST00000373034 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.73■□□□□ 0.91
PCDH19-202ENST00000373034 FKBP8Q14318 412 aa20.72■□□□□ 0.91
PCDH19-202ENST00000373034 ARXQ96QS3 562 aa20.71■□□□□ 0.91
PCDH19-202ENST00000373034 NCLP19338 710 aaKnown RBP20.63■□□□□ 0.89
PCDH19-202ENST00000373034 BECN1Q14457 450 aa20.63■□□□□ 0.89
PCDH19-202ENST00000373034 CCDC136Q96JN2 1154 aa20.62■□□□□ 0.89
PCDH19-202ENST00000373034 DDRGK1Q96HY6 314 aa20.61■□□□□ 0.89
PCDH19-202ENST00000373034 GOLGA6L22H0YM25 854 aa20.61■□□□□ 0.89
PCDH19-202ENST00000373034 MYH16Q9H6N6 1097 aa20.56■□□□□ 0.88
PCDH19-202ENST00000373034 HNRNPUQ00839 825 aaKnown RBP eCLIP20.52■□□□□ 0.88
PCDH19-202ENST00000373034 ZRSR1Q15695 479 aaKnown RBP20.52■□□□□ 0.88
PCDH19-202ENST00000373034 DNTTIP2Q5QJE6 756 aaKnown RBP20.52■□□□□ 0.88
PCDH19-202ENST00000373034 ERICH6BQ5W0A0 696 aa20.52■□□□□ 0.88
PCDH19-202ENST00000373034 PTMAP06454 111 aaKnown RBP20.48■□□□□ 0.87
PCDH19-202ENST00000373034 TONSLQ96HA7 1378 aa20.42■□□□□ 0.86
PCDH19-202ENST00000373034 GOLGA6L6A8MZA4 724 aa20.39■□□□□ 0.85
PCDH19-202ENST00000373034 NAP1L5Q96NT1 182 aaPredicted RBP20.38■□□□□ 0.85
PCDH19-202ENST00000373034 TMC1Q8TDI8 760 aa20.38■□□□□ 0.85
PCDH19-202ENST00000373034 FAM9BQ8IZU0 186 aa20.37■□□□□ 0.85
PCDH19-202ENST00000373034 WDR43Q15061 677 aaKnown RBP eCLIP20.36■□□□□ 0.85
PCDH19-202ENST00000373034 CASC1Q6TDU7 716 aa20.33■□□□□ 0.85
PCDH19-202ENST00000373034 CHAF1AQ13111 956 aaPredicted RBP20.3■□□□□ 0.84
PCDH19-202ENST00000373034 NRDCO43847 1150 aa20.29■□□□□ 0.84
PCDH19-202ENST00000373034 ESF1Q9H501 851 aaKnown RBP20.26■□□□□ 0.83
PCDH19-202ENST00000373034 PPM1GO15355 546 aaPredicted RBP20.24■□□□□ 0.83
PCDH19-202ENST00000373034 SALL2Q9Y467 1007 aaPredicted RBP20.21■□□□□ 0.83
PCDH19-202ENST00000373034 STAG3Q9UJ98 1225 aa20.2■□□□□ 0.82
PCDH19-202ENST00000373034 L1TD1Q5T7N2 865 aaKnown RBP20.17■□□□□ 0.82
PCDH19-202ENST00000373034 DDX10Q13206 875 aaKnown RBP20.15■□□□□ 0.82
PCDH19-202ENST00000373034 MSNP26038 577 aaKnown RBP20.12■□□□□ 0.81
PCDH19-202ENST00000373034 MRS2Q9HD23 443 aa20.11■□□□□ 0.81
PCDH19-202ENST00000373034 ZNF777Q9ULD5 760 aaPredicted RBP20.07■□□□□ 0.8
PCDH19-202ENST00000373034 FBLN2P98095 1184 aa20.06■□□□□ 0.8
PCDH19-202ENST00000373034 PLCB2Q00722 1185 aa20.03■□□□□ 0.8
PCDH19-202ENST00000373034 CHGAP10645 457 aaKnown RBP20.02■□□□□ 0.8
PCDH19-202ENST00000373034 RTN4Q9NQC3 1192 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms