RNA–Protein interactions for RNA: ENST00000373034.8

PCDH19-202, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 9,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-202ENST00000373034 PELP1Q8IZL8 1130 aaKnown RBP25.58■■□□□ 1.69
PCDH19-202ENST00000373034 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
PCDH19-202ENST00000373034 MYT1Q01538 1121 aa24.37■■□□□ 1.49
PCDH19-202ENST00000373034 ERICH6Q7L0X2 663 aa24.37■■□□□ 1.49
PCDH19-202ENST00000373034 CCER1Q8TC90 406 aaPredicted RBP24.35■■□□□ 1.49
PCDH19-202ENST00000373034 SUPT5HO00267 1087 aaKnown RBP23.93■■□□□ 1.42
PCDH19-202ENST00000373034 CENPBP07199 599 aaPredicted RBP23.89■■□□□ 1.42
PCDH19-202ENST00000373034 APLP2Q06481 763 aa23.85■■□□□ 1.41
PCDH19-202ENST00000373034 FAM9AQ8IZU1 332 aaPredicted RBP23.55■■□□□ 1.36
PCDH19-202ENST00000373034 YTHDC1Q96MU7 727 aaKnown RBP23.48■■□□□ 1.35
PCDH19-202ENST00000373034 EHMT2Q96KQ7 1210 aa23.47■■□□□ 1.35
PCDH19-202ENST00000373034 NEFLP07196 543 aa23.46■■□□□ 1.35
PCDH19-202ENST00000373034 ZEB1P37275 1124 aaPredicted RBP23.43■■□□□ 1.34
PCDH19-202ENST00000373034 DAXXQ9UER7 740 aaPredicted RBP23.18■■□□□ 1.3
PCDH19-202ENST00000373034 PCGF6Q9BYE7 350 aa23.13■■□□□ 1.29
PCDH19-202ENST00000373034 SHROOM4Q9ULL8 1493 aa23.1■■□□□ 1.29
PCDH19-202ENST00000373034 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
PCDH19-202ENST00000373034 RTL5Q5HYW3 569 aaPredicted RBP22.63■■□□□ 1.21
PCDH19-202ENST00000373034 ZNF316A6NFI3 1004 aaPredicted RBP22.55■■□□□ 1.2
PCDH19-202ENST00000373034 ATP1B4Q9UN42 357 aaPredicted RBP22.51■■□□□ 1.19
PCDH19-202ENST00000373034 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
PCDH19-202ENST00000373034 RANGAP1P46060 587 aaPredicted RBP22.4■■□□□ 1.18
PCDH19-202ENST00000373034 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
PCDH19-202ENST00000373034 UBTFP17480 764 aaKnown RBP22.26■■□□□ 1.15
PCDH19-202ENST00000373034 CLSPNQ9HAW4 1339 aa22.21■■□□□ 1.15
PCDH19-202ENST00000373034 TRIM26Q12899 539 aaPredicted RBP22.07■■□□□ 1.12
PCDH19-202ENST00000373034 POLR3GLQ9BT43 218 aa22.03■■□□□ 1.12
PCDH19-202ENST00000373034 HRCP23327 699 aa21.98■■□□□ 1.11
PCDH19-202ENST00000373034 GLIPR1L2Q4G1C9 344 aa21.88■■□□□ 1.09
PCDH19-202ENST00000373034 MYT1LQ9UL68 1186 aa21.79■■□□□ 1.08
PCDH19-202ENST00000373034 ZBTB47Q9UFB7 747 aaPredicted RBP21.78■■□□□ 1.08
PCDH19-202ENST00000373034 SLC4A1APQ9BWU0 796 aaKnown RBP21.77■■□□□ 1.08
PCDH19-202ENST00000373034 CDK11AQ9UQ88 783 aaPredicted RBP21.77■■□□□ 1.07
PCDH19-202ENST00000373034 DIEXFQ68CQ4 756 aaKnown RBP21.69■■□□□ 1.06
PCDH19-202ENST00000373034 ANP32BQ92688 251 aaKnown RBP21.68■■□□□ 1.06
PCDH19-202ENST00000373034 PPARGC1BQ86YN6 1023 aaKnown RBP21.65■■□□□ 1.06
PCDH19-202ENST00000373034 CNGB1Q14028 1251 aaPredicted RBP21.65■■□□□ 1.06
PCDH19-202ENST00000373034 ITGAEP38570 1179 aa21.63■■□□□ 1.05
PCDH19-202ENST00000373034 EIF5BO60841 1220 aaKnown RBP21.57■■□□□ 1.04
PCDH19-202ENST00000373034 ANP32AP39687 249 aaKnown RBP21.56■■□□□ 1.04
PCDH19-202ENST00000373034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.54■■□□□ 1.04
PCDH19-202ENST00000373034 HNRNPUL2Q1KMD3 747 aaKnown RBP21.54■■□□□ 1.04
PCDH19-202ENST00000373034 CANXP27824 592 aaKnown RBP21.4■■□□□ 1.02
PCDH19-202ENST00000373034 GTF3C3Q9Y5Q9 886 aa21.39■■□□□ 1.01
PCDH19-202ENST00000373034 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
PCDH19-202ENST00000373034 ANP32CO43423 234 aa21.38■■□□□ 1.01
PCDH19-202ENST00000373034 BCANQ96GW7 911 aa21.35■■□□□ 1.01
PCDH19-202ENST00000373034 HSP90AA1P07900 732 aaKnown RBP21.28■■□□□ 1
PCDH19-202ENST00000373034 NEFMP07197 916 aa21.26■□□□□ 0.99
PCDH19-202ENST00000373034 UPF2Q9HAU5 1272 aaKnown RBP21.2■□□□□ 0.99
PCDH19-202ENST00000373034 SLC24A1O60721 1099 aa21.17■□□□□ 0.98
PCDH19-202ENST00000373034 BCL11AQ9H165 835 aa21.11■□□□□ 0.97
PCDH19-202ENST00000373034 NPM2Q86SE8 214 aaKnown RBP21.09■□□□□ 0.97
PCDH19-202ENST00000373034 FAM50AQ14320 339 aaKnown RBP21.07■□□□□ 0.96
PCDH19-202ENST00000373034 TRIM52Q96A61 297 aa21.06■□□□□ 0.96
PCDH19-202ENST00000373034 TNNT2P45379 298 aaPredicted RBP21.06■□□□□ 0.96
PCDH19-202ENST00000373034 NEUROD1Q13562 356 aa21.02■□□□□ 0.96
PCDH19-202ENST00000373034 CDK11BP21127 795 aaKnown RBP21■□□□□ 0.95
PCDH19-202ENST00000373034 ACIN1Q9UKV3 1341 aaKnown RBP20.92■□□□□ 0.94
PCDH19-202ENST00000373034 LOC105371045A0A1W2PR82 267 aa20.91■□□□□ 0.94
PCDH19-202ENST00000373034 ZNF326Q5BKZ1 582 aaKnown RBP20.89■□□□□ 0.93
PCDH19-202ENST00000373034 NBR1Q14596 966 aa20.82■□□□□ 0.92
PCDH19-202ENST00000373034 TRIM44Q96DX7 344 aaPredicted RBP20.81■□□□□ 0.92
PCDH19-202ENST00000373034 ANP32EQ9BTT0 268 aa20.8■□□□□ 0.92
PCDH19-202ENST00000373034 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.73■□□□□ 0.91
PCDH19-202ENST00000373034 FKBP8Q14318 412 aa20.72■□□□□ 0.91
PCDH19-202ENST00000373034 ARXQ96QS3 562 aa20.71■□□□□ 0.91
PCDH19-202ENST00000373034 NCLP19338 710 aaKnown RBP20.63■□□□□ 0.89
PCDH19-202ENST00000373034 BECN1Q14457 450 aa20.63■□□□□ 0.89
PCDH19-202ENST00000373034 CCDC136Q96JN2 1154 aa20.62■□□□□ 0.89
PCDH19-202ENST00000373034 DDRGK1Q96HY6 314 aa20.61■□□□□ 0.89
PCDH19-202ENST00000373034 GOLGA6L22H0YM25 854 aa20.61■□□□□ 0.89
PCDH19-202ENST00000373034 MYH16Q9H6N6 1097 aa20.56■□□□□ 0.88
PCDH19-202ENST00000373034 HNRNPUQ00839 825 aaKnown RBP eCLIP20.52■□□□□ 0.88
PCDH19-202ENST00000373034 ZRSR1Q15695 479 aaKnown RBP20.52■□□□□ 0.88
PCDH19-202ENST00000373034 DNTTIP2Q5QJE6 756 aaKnown RBP20.52■□□□□ 0.88
PCDH19-202ENST00000373034 ERICH6BQ5W0A0 696 aa20.52■□□□□ 0.88
PCDH19-202ENST00000373034 PTMAP06454 111 aaKnown RBP20.48■□□□□ 0.87
PCDH19-202ENST00000373034 TONSLQ96HA7 1378 aa20.42■□□□□ 0.86
PCDH19-202ENST00000373034 GOLGA6L6A8MZA4 724 aa20.39■□□□□ 0.85
PCDH19-202ENST00000373034 NAP1L5Q96NT1 182 aaPredicted RBP20.38■□□□□ 0.85
PCDH19-202ENST00000373034 TMC1Q8TDI8 760 aa20.38■□□□□ 0.85
PCDH19-202ENST00000373034 FAM9BQ8IZU0 186 aa20.37■□□□□ 0.85
PCDH19-202ENST00000373034 WDR43Q15061 677 aaKnown RBP eCLIP20.36■□□□□ 0.85
PCDH19-202ENST00000373034 CASC1Q6TDU7 716 aa20.33■□□□□ 0.85
PCDH19-202ENST00000373034 CHAF1AQ13111 956 aaPredicted RBP20.3■□□□□ 0.84
PCDH19-202ENST00000373034 NRDCO43847 1150 aa20.29■□□□□ 0.84
PCDH19-202ENST00000373034 ESF1Q9H501 851 aaKnown RBP20.26■□□□□ 0.83
PCDH19-202ENST00000373034 PPM1GO15355 546 aaPredicted RBP20.24■□□□□ 0.83
PCDH19-202ENST00000373034 SALL2Q9Y467 1007 aaPredicted RBP20.21■□□□□ 0.83
PCDH19-202ENST00000373034 STAG3Q9UJ98 1225 aa20.2■□□□□ 0.82
PCDH19-202ENST00000373034 L1TD1Q5T7N2 865 aaKnown RBP20.17■□□□□ 0.82
PCDH19-202ENST00000373034 DDX10Q13206 875 aaKnown RBP20.15■□□□□ 0.82
PCDH19-202ENST00000373034 MSNP26038 577 aaKnown RBP20.12■□□□□ 0.81
PCDH19-202ENST00000373034 MRS2Q9HD23 443 aa20.11■□□□□ 0.81
PCDH19-202ENST00000373034 ZNF777Q9ULD5 760 aaPredicted RBP20.07■□□□□ 0.8
PCDH19-202ENST00000373034 FBLN2P98095 1184 aa20.06■□□□□ 0.8
PCDH19-202ENST00000373034 PLCB2Q00722 1185 aa20.03■□□□□ 0.8
PCDH19-202ENST00000373034 CHGAP10645 457 aaKnown RBP20.02■□□□□ 0.8
PCDH19-202ENST00000373034 RTN4Q9NQC3 1192 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms