Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD5Q8TDI0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
CHD5Q8TDI0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.48■■□□□ 1.03
CHD5Q8TDI0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.48■■□□□ 1.03
CHD5Q8TDI0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD5Q8TDI0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD5Q8TDI0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.47■■□□□ 1.03
CHD5Q8TDI0 RARRES2P11-201ENST00000635158 484 ntBASIC21.47■■□□□ 1.03
CHD5Q8TDI0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.46■■□□□ 1.03
CHD5Q8TDI0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CHD5Q8TDI0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CHD5Q8TDI0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.46■■□□□ 1.03
CHD5Q8TDI0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHD5Q8TDI0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.46■■□□□ 1.03
CHD5Q8TDI0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CHD5Q8TDI0 AL137784.2-201ENST00000607332 1000 ntBASIC21.46■■□□□ 1.03
CHD5Q8TDI0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.46■■□□□ 1.03
CHD5Q8TDI0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHD5Q8TDI0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CHD5Q8TDI0 Z98882.1-201ENST00000622160 2253 ntBASIC21.45■■□□□ 1.03
CHD5Q8TDI0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
CHD5Q8TDI0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 AC090192.1-201ENST00000517740 490 ntBASIC21.45■■□□□ 1.02
CHD5Q8TDI0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD5Q8TDI0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.44■■□□□ 1.02
CHD5Q8TDI0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CHD5Q8TDI0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.44■■□□□ 1.02
CHD5Q8TDI0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHD5Q8TDI0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.44■■□□□ 1.02
CHD5Q8TDI0 AC004911.1-201ENST00000416316 871 ntBASIC21.44■■□□□ 1.02
CHD5Q8TDI0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.44■■□□□ 1.02
CHD5Q8TDI0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHD5Q8TDI0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CHD5Q8TDI0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.43■■□□□ 1.02
CHD5Q8TDI0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 RBM17P2-201ENST00000616397 1405 ntBASIC21.43■■□□□ 1.02
CHD5Q8TDI0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.43■■□□□ 1.02
CHD5Q8TDI0 AC073111.5-205ENST00000641717 521 ntBASIC21.43■■□□□ 1.02
CHD5Q8TDI0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD5Q8TDI0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD5Q8TDI0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD5Q8TDI0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD5Q8TDI0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD5Q8TDI0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.42■■□□□ 1.02
CHD5Q8TDI0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD5Q8TDI0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.42■■□□□ 1.02
CHD5Q8TDI0 SLC7A5P1-201ENST00000568957 537 ntBASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms