Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1A1P48729 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1A1P48729 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.8■□□□□ 0.6
CSNK1A1P48729 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.8■□□□□ 0.6
CSNK1A1P48729 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1A1P48729 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.8■□□□□ 0.6
CSNK1A1P48729 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.8■□□□□ 0.6
CSNK1A1P48729 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1A1P48729 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1A1P48729 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK1A1P48729 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.8■□□□□ 0.6
CSNK1A1P48729 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1A1P48729 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1A1P48729 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1A1P48729 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1A1P48729 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1A1P48729 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1A1P48729 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CSNK1A1P48729 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1A1P48729 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.79■□□□□ 0.6
CSNK1A1P48729 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.79■□□□□ 0.6
CSNK1A1P48729 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1A1P48729 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1A1P48729 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CSNK1A1P48729 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1A1P48729 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK1A1P48729 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.79■□□□□ 0.6
CSNK1A1P48729 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1A1P48729 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CSNK1A1P48729 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1A1P48729 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1A1P48729 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1A1P48729 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1A1P48729 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1A1P48729 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1A1P48729 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1A1P48729 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1A1P48729 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1A1P48729 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1A1P48729 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.78■□□□□ 0.6
CSNK1A1P48729 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.78■□□□□ 0.6
CSNK1A1P48729 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1A1P48729 LINC02228-203ENST00000641970 1355 ntBASIC18.78■□□□□ 0.6
CSNK1A1P48729 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK1A1P48729 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1A1P48729 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1A1P48729 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1A1P48729 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CSNK1A1P48729 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.77■□□□□ 0.6
CSNK1A1P48729 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1A1P48729 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1A1P48729 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.77■□□□□ 0.6
CSNK1A1P48729 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.77■□□□□ 0.6
CSNK1A1P48729 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.77■□□□□ 0.6
CSNK1A1P48729 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1A1P48729 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1A1P48729 Z98882.1-201ENST00000622160 2253 ntBASIC18.77■□□□□ 0.6
CSNK1A1P48729 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1A1P48729 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1A1P48729 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CSNK1A1P48729 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CSNK1A1P48729 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CSNK1A1P48729 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1A1P48729 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CSNK1A1P48729 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1A1P48729 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1A1P48729 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1A1P48729 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1A1P48729 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CSNK1A1P48729 AC123595.1-201ENST00000440769 1046 ntBASIC18.76■□□□□ 0.59
CSNK1A1P48729 YBX1P1-201ENST00000445822 960 ntBASIC18.76■□□□□ 0.59
CSNK1A1P48729 AC079140.4-201ENST00000507448 529 ntBASIC18.76■□□□□ 0.59
CSNK1A1P48729 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.76■□□□□ 0.59
CSNK1A1P48729 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CSNK1A1P48729 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.76■□□□□ 0.59
CSNK1A1P48729 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1A1P48729 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1A1P48729 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1A1P48729 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.75■□□□□ 0.59
CSNK1A1P48729 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.75■□□□□ 0.59
CSNK1A1P48729 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.75■□□□□ 0.59
CSNK1A1P48729 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1A1P48729 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.75■□□□□ 0.59
CSNK1A1P48729 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1A1P48729 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1A1P48729 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1A1P48729 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1A1P48729 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1A1P48729 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1A1P48729 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CSNK1A1P48729 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1A1P48729 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1A1P48729 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1A1P48729 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1A1P48729 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CSNK1A1P48729 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.74■□□□□ 0.59
CSNK1A1P48729 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1A1P48729 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.74■□□□□ 0.59
CSNK1A1P48729 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1A1P48729 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms