Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 THA1P-201ENST00000590384 1145 ntBASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 AC129492.7-201ENST00000622992 756 ntBASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHCHD3Q9NX63 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.58■□□□□ 0.73
CHCHD3Q9NX63 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHCHD3Q9NX63 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.58■□□□□ 0.73
CHCHD3Q9NX63 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.58■□□□□ 0.73
CHCHD3Q9NX63 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHCHD3Q9NX63 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHCHD3Q9NX63 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CHCHD3Q9NX63 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHCHD3Q9NX63 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.58■□□□□ 0.73
CHCHD3Q9NX63 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHCHD3Q9NX63 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHCHD3Q9NX63 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHCHD3Q9NX63 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHCHD3Q9NX63 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.58■□□□□ 0.72
CHCHD3Q9NX63 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHCHD3Q9NX63 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CHCHD3Q9NX63 AC005229.4-201ENST00000610085 2198 ntBASIC19.58■□□□□ 0.72
CHCHD3Q9NX63 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHCHD3Q9NX63 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.58■□□□□ 0.72
CHCHD3Q9NX63 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHCHD3Q9NX63 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHCHD3Q9NX63 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHCHD3Q9NX63 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.58■□□□□ 0.72
CHCHD3Q9NX63 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.57■□□□□ 0.72
CHCHD3Q9NX63 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 MIR4281-201ENST00000580852 62 ntBASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 FP325331.1-202ENST00000623531 1380 ntBASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHCHD3Q9NX63 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 KRT18P24-201ENST00000344739 1156 ntBASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 AC009086.3-201ENST00000623486 1008 ntBASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD3Q9NX63 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms