RNA–Protein interactions for RNA: ENST00000378424.8

FAM213B-201, Transcript of Prostamide/prostaglandin F synthase, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FAM213B, Length 2,765 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM213B-201ENST00000378424 NISCHQ9Y2I1 1504 aa36.18■■■■□ 3.38
FAM213B-201ENST00000378424 SHROOM4Q9ULL8 1493 aa31.8■■■□□ 2.68
FAM213B-201ENST00000378424 SUPT5HO00267 1087 aaKnown RBP31.58■■■□□ 2.65
FAM213B-201ENST00000378424 HRCP23327 699 aa31.52■■■□□ 2.64
FAM213B-201ENST00000378424 PPARGC1BQ86YN6 1023 aaKnown RBP31.33■■■□□ 2.61
FAM213B-201ENST00000378424 PCGF6Q9BYE7 350 aa31.21■■■□□ 2.59
FAM213B-201ENST00000378424 MYO15BQ96JP2 1530 aa31.1■■■□□ 2.57
FAM213B-201ENST00000378424 CCDC180Q9P1Z9 1646 aa30.93■■■□□ 2.54
FAM213B-201ENST00000378424 CHIC1Q5VXU3 224 aa30.78■■■□□ 2.52
FAM213B-201ENST00000378424 DCAF8L2P0C7V8 631 aa30.48■■■□□ 2.47
FAM213B-201ENST00000378424 ZCCHC6Q5VYS8 1495 aaKnown RBP30.46■■■□□ 2.47
FAM213B-201ENST00000378424 LOC105371045A0A1W2PR82 267 aa30.35■■■□□ 2.45
FAM213B-201ENST00000378424 DCAF1Q9Y4B6 1507 aa29.96■■■□□ 2.39
FAM213B-201ENST00000378424 SCAF1Q9H7N4 1312 aaKnown RBP29.95■■■□□ 2.39
FAM213B-201ENST00000378424 TRIM26Q12899 539 aaPredicted RBP29.88■■■□□ 2.37
FAM213B-201ENST00000378424 PELP1Q8IZL8 1130 aaKnown RBP29.83■■■□□ 2.37
FAM213B-201ENST00000378424 EHMT2Q96KQ7 1210 aa29.47■■■□□ 2.31
FAM213B-201ENST00000378424 ZEB1P37275 1124 aaPredicted RBP29.36■■■□□ 2.29
FAM213B-201ENST00000378424 ABCC9O60706 1549 aa29.33■■■□□ 2.29
FAM213B-201ENST00000378424 FAM9AQ8IZU1 332 aaPredicted RBP29.32■■■□□ 2.28
FAM213B-201ENST00000378424 NEUROD1Q13562 356 aa29.18■■■□□ 2.26
FAM213B-201ENST00000378424 ACIN1Q9UKV3 1341 aaKnown RBP29.07■■■□□ 2.24
FAM213B-201ENST00000378424 SCRIBQ14160 1630 aa29.06■■■□□ 2.24
FAM213B-201ENST00000378424 GTF3C3Q9Y5Q9 886 aa28.99■■■□□ 2.23
FAM213B-201ENST00000378424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.99■■■□□ 2.23
FAM213B-201ENST00000378424 TRIM41Q8WV44 630 aa28.98■■■□□ 2.23
FAM213B-201ENST00000378424 CCER1Q8TC90 406 aaPredicted RBP28.77■■■□□ 2.2
FAM213B-201ENST00000378424 NACADO15069 1562 aa28.77■■■□□ 2.2
FAM213B-201ENST00000378424 TTBK1Q5TCY1 1321 aaPredicted RBP28.7■■■□□ 2.19
FAM213B-201ENST00000378424 DIEXFQ68CQ4 756 aaKnown RBP28.69■■■□□ 2.18
FAM213B-201ENST00000378424 CENPBP07199 599 aaPredicted RBP28.58■■■□□ 2.17
FAM213B-201ENST00000378424 YTHDC1Q96MU7 727 aaKnown RBP28.55■■■□□ 2.16
FAM213B-201ENST00000378424 RSF1Q96T23 1441 aaPredicted RBP28.48■■■□□ 2.15
FAM213B-201ENST00000378424 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
FAM213B-201ENST00000378424 MYT1Q01538 1121 aa28.44■■■□□ 2.14
FAM213B-201ENST00000378424 CECR2Q9BXF3 1484 aa28.33■■■□□ 2.13
FAM213B-201ENST00000378424 MROH2BQ7Z745 1585 aa28.15■■■□□ 2.1
FAM213B-201ENST00000378424 MIER1Q8N108 512 aa28.08■■■□□ 2.09
FAM213B-201ENST00000378424 ZNF316A6NFI3 1004 aaPredicted RBP28.06■■■□□ 2.08
FAM213B-201ENST00000378424 UNC13AQ9UPW8 1703 aa28.01■■■□□ 2.07
FAM213B-201ENST00000378424 PABPN1Q86U42 306 aaKnown RBP eCLIP28■■■□□ 2.07
FAM213B-201ENST00000378424 WIZO95785 1651 aa27.98■■■□□ 2.07
FAM213B-201ENST00000378424 BAZ1AQ9NRL2 1556 aaPredicted RBP27.83■■■□□ 2.05
FAM213B-201ENST00000378424 HNRNPUL2Q1KMD3 747 aaKnown RBP27.76■■■□□ 2.03
FAM213B-201ENST00000378424 CEP162Q5TB80 1403 aa27.7■■■□□ 2.02
FAM213B-201ENST00000378424 BICRAQ9NZM4 1560 aa27.68■■■□□ 2.02
FAM213B-201ENST00000378424 SMARCA4P51532 1647 aa27.66■■■□□ 2.02
FAM213B-201ENST00000378424 UBTFP17480 764 aaKnown RBP27.59■■■□□ 2.01
FAM213B-201ENST00000378424 ABCC8Q09428 1581 aa27.58■■■□□ 2.01
FAM213B-201ENST00000378424 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
FAM213B-201ENST00000378424 WRNQ14191 1432 aaPredicted RBP eCLIP27.57■■■□□ 2
FAM213B-201ENST00000378424 SOGA1O94964 1423 aa27.53■■■□□ 2
FAM213B-201ENST00000378424 SUPT16HQ9Y5B9 1047 aaKnown RBP27.53■■■□□ 2
FAM213B-201ENST00000378424 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
FAM213B-201ENST00000378424 RUSC2Q8N2Y8 1516 aa27.42■■□□□ 1.98
FAM213B-201ENST00000378424 TSHZ2Q9NRE2 1034 aa27.4■■□□□ 1.98
FAM213B-201ENST00000378424 EIF4G1Q04637 1599 aaKnown RBP27.35■■□□□ 1.97
FAM213B-201ENST00000378424 TNIKQ9UKE5 1360 aa27.35■■□□□ 1.97
FAM213B-201ENST00000378424 RANGAP1P46060 587 aaPredicted RBP27.35■■□□□ 1.97
FAM213B-201ENST00000378424 SMARCA2P51531 1590 aa27.32■■□□□ 1.96
FAM213B-201ENST00000378424 CSRNP3Q8WYN3 585 aa27.3■■□□□ 1.96
FAM213B-201ENST00000378424 BCL11AQ9H165 835 aa27.28■■□□□ 1.96
FAM213B-201ENST00000378424 BCANQ96GW7 911 aa27.28■■□□□ 1.96
FAM213B-201ENST00000378424 ANP32EQ9BTT0 268 aa27.28■■□□□ 1.96
FAM213B-201ENST00000378424 KCNH8Q96L42 1107 aa27.2■■□□□ 1.94
FAM213B-201ENST00000378424 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
FAM213B-201ENST00000378424 PEG3Q9GZU2 1588 aa27.07■■□□□ 1.92
FAM213B-201ENST00000378424 BAZ1BQ9UIG0 1483 aaKnown RBP27.04■■□□□ 1.92
FAM213B-201ENST00000378424 GOLGA3Q08378 1498 aa27.03■■□□□ 1.92
FAM213B-201ENST00000378424 APLP2Q06481 763 aa26.97■■□□□ 1.91
FAM213B-201ENST00000378424 CLIP1P30622 1438 aa26.94■■□□□ 1.9
FAM213B-201ENST00000378424 DHX57Q6P158 1386 aaKnown RBP26.91■■□□□ 1.9
FAM213B-201ENST00000378424 CLSPNQ9HAW4 1339 aa26.91■■□□□ 1.9
FAM213B-201ENST00000378424 FKBP8Q14318 412 aa26.91■■□□□ 1.9
FAM213B-201ENST00000378424 ITGAEP38570 1179 aa26.85■■□□□ 1.89
FAM213B-201ENST00000378424 EEA1Q15075 1411 aa26.84■■□□□ 1.89
FAM213B-201ENST00000378424 VPS8Q8N3P4 1428 aa26.82■■□□□ 1.88
FAM213B-201ENST00000378424 RBM19Q9Y4C8 960 aaKnown RBP26.75■■□□□ 1.87
FAM213B-201ENST00000378424 KANK4Q5T7N3 995 aaPredicted RBP26.73■■□□□ 1.87
FAM213B-201ENST00000378424 CEP164Q9UPV0 1460 aa26.71■■□□□ 1.87
FAM213B-201ENST00000378424 RAPGEF2Q9Y4G8 1499 aa26.7■■□□□ 1.86
FAM213B-201ENST00000378424 DDX10Q13206 875 aaKnown RBP26.66■■□□□ 1.86
FAM213B-201ENST00000378424 TRIM52Q96A61 297 aa26.65■■□□□ 1.86
FAM213B-201ENST00000378424 HIRIP3Q9BW71 556 aaPredicted RBP26.64■■□□□ 1.86
FAM213B-201ENST00000378424 NCAPD3P42695 1498 aa26.64■■□□□ 1.86
FAM213B-201ENST00000378424 SYNJ1O43426 1573 aa26.64■■□□□ 1.85
FAM213B-201ENST00000378424 KIF21BO75037 1637 aa26.61■■□□□ 1.85
FAM213B-201ENST00000378424 MSH5O43196 834 aa26.6■■□□□ 1.85
FAM213B-201ENST00000378424 HMGXB3Q12766 1538 aa26.56■■□□□ 1.84
FAM213B-201ENST00000378424 NEFLP07196 543 aa26.48■■□□□ 1.83
FAM213B-201ENST00000378424 IRX6P78412 446 aaPredicted RBP26.46■■□□□ 1.83
FAM213B-201ENST00000378424 SIN3AQ96ST3 1273 aa26.44■■□□□ 1.82
FAM213B-201ENST00000378424 ARAP1Q96P48 1450 aa26.34■■□□□ 1.81
FAM213B-201ENST00000378424 RAB3GAP2Q9H2M9 1393 aa26.32■■□□□ 1.8
FAM213B-201ENST00000378424 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
FAM213B-201ENST00000378424 TOP2BQ02880 1626 aa26.31■■□□□ 1.8
FAM213B-201ENST00000378424 WDR97A6NE52 1622 aa26.29■■□□□ 1.8
FAM213B-201ENST00000378424 CFTRP13569 1480 aa26.29■■□□□ 1.8
FAM213B-201ENST00000378424 CCNB3Q8WWL7 1395 aa26.28■■□□□ 1.8
FAM213B-201ENST00000378424 MAPKBP1O60336 1514 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms