Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 AL356740.2-201ENST00000601559 647 ntBASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-6A0A0B4J262 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-6A0A0B4J262 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAV8-6A0A0B4J262 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-6A0A0B4J262 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-6A0A0B4J262 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-6A0A0B4J262 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-6A0A0B4J262 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-6A0A0B4J262 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 AL356441.2-201ENST00000443009 864 ntBASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 FAM99A-202ENST00000538190 1989 ntBASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV8-6A0A0B4J262 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms