RNA–Protein interactions for RNA: ENST00000392238.2

FAM117B-201, Transcript of family with sequence similarity 117 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM117B, Length 5,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM117B-201ENST00000392238 DCAF8L2P0C7V8 631 aa33.56■■■□□ 2.96
FAM117B-201ENST00000392238 NISCHQ9Y2I1 1504 aa32.52■■■□□ 2.8
FAM117B-201ENST00000392238 SUPT5HO00267 1087 aaKnown RBP31.67■■■□□ 2.66
FAM117B-201ENST00000392238 SHROOM4Q9ULL8 1493 aa31.33■■■□□ 2.61
FAM117B-201ENST00000392238 EHMT2Q96KQ7 1210 aa30.6■■■□□ 2.49
FAM117B-201ENST00000392238 APLP2Q06481 763 aa29.93■■■□□ 2.38
FAM117B-201ENST00000392238 FAM9AQ8IZU1 332 aaPredicted RBP29.86■■■□□ 2.37
FAM117B-201ENST00000392238 TTBK1Q5TCY1 1321 aaPredicted RBP29.5■■■□□ 2.31
FAM117B-201ENST00000392238 TRIM41Q8WV44 630 aa29.37■■■□□ 2.29
FAM117B-201ENST00000392238 RANGAP1P46060 587 aaPredicted RBP29.37■■■□□ 2.29
FAM117B-201ENST00000392238 PCGF6Q9BYE7 350 aa29.2■■■□□ 2.26
FAM117B-201ENST00000392238 ATP1B4Q9UN42 357 aaPredicted RBP29.09■■■□□ 2.25
FAM117B-201ENST00000392238 PELP1Q8IZL8 1130 aaKnown RBP29.08■■■□□ 2.25
FAM117B-201ENST00000392238 UBTFP17480 764 aaKnown RBP29■■■□□ 2.23
FAM117B-201ENST00000392238 CCER1Q8TC90 406 aaPredicted RBP28.75■■■□□ 2.19
FAM117B-201ENST00000392238 ZEB1P37275 1124 aaPredicted RBP28.63■■■□□ 2.17
FAM117B-201ENST00000392238 PPARGC1BQ86YN6 1023 aaKnown RBP28.43■■■□□ 2.14
FAM117B-201ENST00000392238 CENPBP07199 599 aaPredicted RBP28.31■■■□□ 2.12
FAM117B-201ENST00000392238 ABCC9O60706 1549 aa28.2■■■□□ 2.11
FAM117B-201ENST00000392238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.13■■■□□ 2.09
FAM117B-201ENST00000392238 HNRNPUL2Q1KMD3 747 aaKnown RBP28.13■■■□□ 2.09
FAM117B-201ENST00000392238 TRIM26Q12899 539 aaPredicted RBP28.07■■■□□ 2.08
FAM117B-201ENST00000392238 CHIC1Q5VXU3 224 aa28.07■■■□□ 2.08
FAM117B-201ENST00000392238 LOC105371045A0A1W2PR82 267 aa28.05■■■□□ 2.08
FAM117B-201ENST00000392238 PABPN1Q86U42 306 aaKnown RBP eCLIP28.04■■■□□ 2.08
FAM117B-201ENST00000392238 ITGAEP38570 1179 aa28.03■■■□□ 2.08
FAM117B-201ENST00000392238 MYT1LQ9UL68 1186 aa27.99■■■□□ 2.07
FAM117B-201ENST00000392238 YTHDC1Q96MU7 727 aaKnown RBP27.93■■■□□ 2.06
FAM117B-201ENST00000392238 ERICH6Q7L0X2 663 aa27.86■■■□□ 2.05
FAM117B-201ENST00000392238 NEFLP07196 543 aa27.81■■■□□ 2.04
FAM117B-201ENST00000392238 POLR3GLQ9BT43 218 aa27.65■■■□□ 2.02
FAM117B-201ENST00000392238 HRCP23327 699 aa27.5■■□□□ 1.99
FAM117B-201ENST00000392238 FAM50AQ14320 339 aaKnown RBP27.39■■□□□ 1.98
FAM117B-201ENST00000392238 CNGB1Q14028 1251 aaPredicted RBP27.35■■□□□ 1.97
FAM117B-201ENST00000392238 FBLN2P98095 1184 aa27.23■■□□□ 1.95
FAM117B-201ENST00000392238 TRIM52Q96A61 297 aa27.2■■□□□ 1.95
FAM117B-201ENST00000392238 SLC4A1APQ9BWU0 796 aaKnown RBP27.18■■□□□ 1.94
FAM117B-201ENST00000392238 SCRIBQ14160 1630 aa27.04■■□□□ 1.92
FAM117B-201ENST00000392238 NEUROD1Q13562 356 aa27.03■■□□□ 1.92
FAM117B-201ENST00000392238 P3H3Q8IVL6 736 aa26.94■■□□□ 1.9
FAM117B-201ENST00000392238 DIEXFQ68CQ4 756 aaKnown RBP26.93■■□□□ 1.9
FAM117B-201ENST00000392238 CSRNP3Q8WYN3 585 aa26.91■■□□□ 1.9
FAM117B-201ENST00000392238 DAXXQ9UER7 740 aaPredicted RBP26.91■■□□□ 1.9
FAM117B-201ENST00000392238 ZCCHC6Q5VYS8 1495 aaKnown RBP26.9■■□□□ 1.9
FAM117B-201ENST00000392238 ARID3CA6NKF2 412 aa26.87■■□□□ 1.89
FAM117B-201ENST00000392238 ZNF326Q5BKZ1 582 aaKnown RBP26.84■■□□□ 1.89
FAM117B-201ENST00000392238 MYT1Q01538 1121 aa26.78■■□□□ 1.88
FAM117B-201ENST00000392238 CCDC180Q9P1Z9 1646 aa26.68■■□□□ 1.86
FAM117B-201ENST00000392238 ZNF777Q9ULD5 760 aaPredicted RBP26.64■■□□□ 1.86
FAM117B-201ENST00000392238 CDK11AQ9UQ88 783 aaPredicted RBP26.57■■□□□ 1.84
FAM117B-201ENST00000392238 ANP32CO43423 234 aa26.56■■□□□ 1.84
FAM117B-201ENST00000392238 CLSPNQ9HAW4 1339 aa26.55■■□□□ 1.84
FAM117B-201ENST00000392238 BCANQ96GW7 911 aa26.47■■□□□ 1.83
FAM117B-201ENST00000392238 ZNF316A6NFI3 1004 aaPredicted RBP26.42■■□□□ 1.82
FAM117B-201ENST00000392238 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
FAM117B-201ENST00000392238 NPM1P06748 294 aaKnown RBP eCLIP26.27■■□□□ 1.8
FAM117B-201ENST00000392238 ESF1Q9H501 851 aaKnown RBP26.25■■□□□ 1.79
FAM117B-201ENST00000392238 SLC24A1O60721 1099 aa26.2■■□□□ 1.79
FAM117B-201ENST00000392238 NEFMP07197 916 aa26.17■■□□□ 1.78
FAM117B-201ENST00000392238 CHGAP10645 457 aaKnown RBP26.16■■□□□ 1.78
FAM117B-201ENST00000392238 ZBTB47Q9UFB7 747 aaPredicted RBP26.15■■□□□ 1.78
FAM117B-201ENST00000392238 CANXP27824 592 aaKnown RBP26.14■■□□□ 1.78
FAM117B-201ENST00000392238 TONSLQ96HA7 1378 aa26.14■■□□□ 1.77
FAM117B-201ENST00000392238 CHMP7Q8WUX9 453 aaPredicted RBP26.14■■□□□ 1.77
FAM117B-201ENST00000392238 GTF3C3Q9Y5Q9 886 aa26.13■■□□□ 1.77
FAM117B-201ENST00000392238 RTL5Q5HYW3 569 aaPredicted RBP26.13■■□□□ 1.77
FAM117B-201ENST00000392238 CHIC2Q9UKJ5 165 aa26.12■■□□□ 1.77
FAM117B-201ENST00000392238 STAG3Q9UJ98 1225 aa26.11■■□□□ 1.77
FAM117B-201ENST00000392238 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
FAM117B-201ENST00000392238 PLPPR3Q6T4P5 718 aa26.06■■□□□ 1.76
FAM117B-201ENST00000392238 NACADO15069 1562 aa26.06■■□□□ 1.76
FAM117B-201ENST00000392238 RSF1Q96T23 1441 aaPredicted RBP26.04■■□□□ 1.76
FAM117B-201ENST00000392238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.03■■□□□ 1.765e-7■□□□□ 8.9
FAM117B-201ENST00000392238 BCL11AQ9H165 835 aa26■■□□□ 1.75
FAM117B-201ENST00000392238 MTUS2Q5JR59 1369 aa26■■□□□ 1.75
FAM117B-201ENST00000392238 CLIP1P30622 1438 aa25.96■■□□□ 1.75
FAM117B-201ENST00000392238 TSPY4P0CV99 314 aa25.95■■□□□ 1.74
FAM117B-201ENST00000392238 TSPY10P0CW01 314 aa25.95■■□□□ 1.74
FAM117B-201ENST00000392238 BAZ1BQ9UIG0 1483 aaKnown RBP25.94■■□□□ 1.74
FAM117B-201ENST00000392238 DDX10Q13206 875 aaKnown RBP25.84■■□□□ 1.73
FAM117B-201ENST00000392238 WRNQ14191 1432 aaPredicted RBP eCLIP25.83■■□□□ 1.73
FAM117B-201ENST00000392238 GOLGA3Q08378 1498 aa25.81■■□□□ 1.72
FAM117B-201ENST00000392238 EEA1Q15075 1411 aa25.8■■□□□ 1.72
FAM117B-201ENST00000392238 KDM2AQ9Y2K7 1162 aa25.79■■□□□ 1.72
FAM117B-201ENST00000392238 ACIN1Q9UKV3 1341 aaKnown RBP25.78■■□□□ 1.72
FAM117B-201ENST00000392238 KCNH8Q96L42 1107 aa25.77■■□□□ 1.72
FAM117B-201ENST00000392238 FAM9BQ8IZU0 186 aa25.74■■□□□ 1.71
FAM117B-201ENST00000392238 RRP7BPQ9NSQ0 103 aa25.73■■□□□ 1.71
FAM117B-201ENST00000392238 CEP162Q5TB80 1403 aa25.71■■□□□ 1.71
FAM117B-201ENST00000392238 PLEKHD1A6NEE1 506 aa25.71■■□□□ 1.71
FAM117B-201ENST00000392238 HNRNPUQ00839 825 aaKnown RBP eCLIP25.71■■□□□ 1.71
FAM117B-201ENST00000392238 KIF27Q86VH2 1401 aa25.69■■□□□ 1.7
FAM117B-201ENST00000392238 MYO15BQ96JP2 1530 aa25.65■■□□□ 1.7
FAM117B-201ENST00000392238 SALL2Q9Y467 1007 aaPredicted RBP25.65■■□□□ 1.7
FAM117B-201ENST00000392238 BAZ1AQ9NRL2 1556 aaPredicted RBP25.63■■□□□ 1.69
FAM117B-201ENST00000392238 TMC1Q8TDI8 760 aa25.62■■□□□ 1.69
FAM117B-201ENST00000392238 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
FAM117B-201ENST00000392238 FKBP8Q14318 412 aa25.59■■□□□ 1.69
FAM117B-201ENST00000392238 CEP164Q9UPV0 1460 aa25.55■■□□□ 1.68
FAM117B-201ENST00000392238 CECR2Q9BXF3 1484 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms