Protein–RNA interactions for Protein: Q9Y324

FCF1, rRNA-processing protein FCF1 homolog, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1Q9Y324 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.61■■□□□ 1.05
FCF1Q9Y324 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
FCF1Q9Y324 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
FCF1Q9Y324 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.61■■□□□ 1.05
FCF1Q9Y324 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FCF1Q9Y324 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FCF1Q9Y324 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
FCF1Q9Y324 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FCF1Q9Y324 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
FCF1Q9Y324 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FCF1Q9Y324 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
FCF1Q9Y324 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.61■■□□□ 1.05
FCF1Q9Y324 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
FCF1Q9Y324 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FCF1Q9Y324 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FCF1Q9Y324 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.61■■□□□ 1.05
FCF1Q9Y324 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FCF1Q9Y324 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FCF1Q9Y324 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
FCF1Q9Y324 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FCF1Q9Y324 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FCF1Q9Y324 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FCF1Q9Y324 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FCF1Q9Y324 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FCF1Q9Y324 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.6■■□□□ 1.05
FCF1Q9Y324 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FCF1Q9Y324 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
FCF1Q9Y324 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.6■■□□□ 1.05
FCF1Q9Y324 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
FCF1Q9Y324 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
FCF1Q9Y324 EP400NL-214ENST00000641289 2402 ntBASIC21.59■■□□□ 1.05
FCF1Q9Y324 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.59■■□□□ 1.05
FCF1Q9Y324 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FCF1Q9Y324 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FCF1Q9Y324 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FCF1Q9Y324 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FCF1Q9Y324 AC004911.1-201ENST00000416316 871 ntBASIC21.59■■□□□ 1.05
FCF1Q9Y324 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.59■■□□□ 1.05
FCF1Q9Y324 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FCF1Q9Y324 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.59■■□□□ 1.05
FCF1Q9Y324 EEF1DP3-203ENST00000566025 782 ntBASIC21.59■■□□□ 1.05
FCF1Q9Y324 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.59■■□□□ 1.05
FCF1Q9Y324 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.59■■□□□ 1.05
FCF1Q9Y324 AL137784.2-201ENST00000607332 1000 ntBASIC21.59■■□□□ 1.05
FCF1Q9Y324 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FCF1Q9Y324 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FCF1Q9Y324 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FCF1Q9Y324 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FCF1Q9Y324 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.58■■□□□ 1.05
FCF1Q9Y324 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FCF1Q9Y324 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
FCF1Q9Y324 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.58■■□□□ 1.05
FCF1Q9Y324 AC016769.1-201ENST00000409132 1010 ntBASIC21.58■■□□□ 1.05
FCF1Q9Y324 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.58■■□□□ 1.05
FCF1Q9Y324 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.58■■□□□ 1.05
FCF1Q9Y324 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.58■■□□□ 1.05
FCF1Q9Y324 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
FCF1Q9Y324 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FCF1Q9Y324 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
FCF1Q9Y324 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FCF1Q9Y324 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FCF1Q9Y324 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FCF1Q9Y324 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FCF1Q9Y324 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FCF1Q9Y324 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
FCF1Q9Y324 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.57■■□□□ 1.04
FCF1Q9Y324 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
FCF1Q9Y324 AP001160.3-201ENST00000601484 763 ntBASIC21.57■■□□□ 1.04
FCF1Q9Y324 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FCF1Q9Y324 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.57■■□□□ 1.04
FCF1Q9Y324 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FCF1Q9Y324 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
FCF1Q9Y324 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FCF1Q9Y324 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FCF1Q9Y324 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FCF1Q9Y324 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FCF1Q9Y324 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.56■■□□□ 1.04
FCF1Q9Y324 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FCF1Q9Y324 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FCF1Q9Y324 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.56■■□□□ 1.04
FCF1Q9Y324 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.56■■□□□ 1.04
FCF1Q9Y324 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.56■■□□□ 1.04
FCF1Q9Y324 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
FCF1Q9Y324 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
FCF1Q9Y324 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.55■■□□□ 1.04
FCF1Q9Y324 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FCF1Q9Y324 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FCF1Q9Y324 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
FCF1Q9Y324 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
FCF1Q9Y324 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
FCF1Q9Y324 AC006015.1-201ENST00000429970 570 ntBASIC21.55■■□□□ 1.04
FCF1Q9Y324 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.55■■□□□ 1.04
FCF1Q9Y324 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
FCF1Q9Y324 AC053503.5-201ENST00000601508 636 ntBASIC21.55■■□□□ 1.04
FCF1Q9Y324 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
FCF1Q9Y324 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FCF1Q9Y324 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
FCF1Q9Y324 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.55■■□□□ 1.04
FCF1Q9Y324 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.55■■□□□ 1.04
FCF1Q9Y324 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms