Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.14■□□□□ 0.97
CAPNS1P04632 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPNS1P04632 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPNS1P04632 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CAPNS1P04632 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CAPNS1P04632 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPNS1P04632 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPNS1P04632 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPNS1P04632 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CAPNS1P04632 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.13■□□□□ 0.97
CAPNS1P04632 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CAPNS1P04632 AC083906.2-201ENST00000511578 360 ntBASIC21.13■□□□□ 0.97
CAPNS1P04632 SLC7A5P2-201ENST00000553010 536 ntBASIC21.13■□□□□ 0.97
CAPNS1P04632 AL121832.2-201ENST00000610979 668 ntBASIC21.13■□□□□ 0.97
CAPNS1P04632 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CAPNS1P04632 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CAPNS1P04632 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPNS1P04632 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CAPNS1P04632 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPNS1P04632 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPNS1P04632 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPNS1P04632 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.12■□□□□ 0.97
CAPNS1P04632 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPNS1P04632 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPNS1P04632 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CAPNS1P04632 KRT19P1-201ENST00000405746 1186 ntBASIC21.12■□□□□ 0.97
CAPNS1P04632 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPNS1P04632 FAM201B-201ENST00000458407 597 ntBASIC21.12■□□□□ 0.97
CAPNS1P04632 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPNS1P04632 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.12■□□□□ 0.97
CAPNS1P04632 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPNS1P04632 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPNS1P04632 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPNS1P04632 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CAPNS1P04632 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.12■□□□□ 0.97
CAPNS1P04632 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPNS1P04632 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CAPNS1P04632 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.11■□□□□ 0.97
CAPNS1P04632 AC026310.3-201ENST00000625186 2373 ntBASIC21.11■□□□□ 0.97
CAPNS1P04632 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPNS1P04632 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CAPNS1P04632 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.11■□□□□ 0.97
CAPNS1P04632 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPNS1P04632 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPNS1P04632 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CAPNS1P04632 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.11■□□□□ 0.97
CAPNS1P04632 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPNS1P04632 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPNS1P04632 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPNS1P04632 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CAPNS1P04632 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPNS1P04632 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.1■□□□□ 0.97
CAPNS1P04632 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CAPNS1P04632 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPNS1P04632 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPNS1P04632 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPNS1P04632 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPNS1P04632 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.1■□□□□ 0.97
CAPNS1P04632 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CAPNS1P04632 KRT18P11-201ENST00000435214 1283 ntBASIC21.1■□□□□ 0.97
CAPNS1P04632 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.1■□□□□ 0.97
CAPNS1P04632 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.1■□□□□ 0.97
CAPNS1P04632 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.1■□□□□ 0.97
CAPNS1P04632 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.1■□□□□ 0.97
CAPNS1P04632 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CAPNS1P04632 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPNS1P04632 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPNS1P04632 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPNS1P04632 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPNS1P04632 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.1■□□□□ 0.97
CAPNS1P04632 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPNS1P04632 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.1■□□□□ 0.97
CAPNS1P04632 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.09■□□□□ 0.97
CAPNS1P04632 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPNS1P04632 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.09■□□□□ 0.97
CAPNS1P04632 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPNS1P04632 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CAPNS1P04632 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CAPNS1P04632 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CAPNS1P04632 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.09■□□□□ 0.97
CAPNS1P04632 AL138781.1-201ENST00000566567 1274 ntBASIC21.09■□□□□ 0.97
CAPNS1P04632 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.09■□□□□ 0.97
CAPNS1P04632 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
CAPNS1P04632 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.09■□□□□ 0.97
CAPNS1P04632 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPNS1P04632 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.09■□□□□ 0.97
CAPNS1P04632 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPNS1P04632 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
CAPNS1P04632 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
CAPNS1P04632 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CAPNS1P04632 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CAPNS1P04632 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CAPNS1P04632 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CAPNS1P04632 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CAPNS1P04632 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CAPNS1P04632 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CAPNS1P04632 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CAPNS1P04632 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CAPNS1P04632 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.08■□□□□ 0.97
CAPNS1P04632 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms