Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRGV1A0A0A0MS02 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.42■□□□□ 0.06
TRGV1A0A0A0MS02 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRGV1A0A0A0MS02 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.42■□□□□ 0.06
TRGV1A0A0A0MS02 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.42■□□□□ 0.06
TRGV1A0A0A0MS02 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRGV1A0A0A0MS02 AC110285.6-201ENST00000617652 491 ntBASIC15.42■□□□□ 0.06
TRGV1A0A0A0MS02 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRGV1A0A0A0MS02 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRGV1A0A0A0MS02 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
TRGV1A0A0A0MS02 AC010542.4-201ENST00000563151 1910 ntBASIC15.42■□□□□ 0.06
TRGV1A0A0A0MS02 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRGV1A0A0A0MS02 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 AP004607.7-201ENST00000527152 1677 ntBASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 EDA-201ENST00000338901 1233 ntBASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 IGHV3-19-201ENST00000521488 291 ntBASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 AL355001.2-201ENST00000620617 1191 ntBASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRGV1A0A0A0MS02 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.4■□□□□ 0.06
TRGV1A0A0A0MS02 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV1A0A0A0MS02 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV1A0A0A0MS02 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV1A0A0A0MS02 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.4■□□□□ 0.06
TRGV1A0A0A0MS02 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRGV1A0A0A0MS02 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.4■□□□□ 0.06
TRGV1A0A0A0MS02 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV1A0A0A0MS02 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV1A0A0A0MS02 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRGV1A0A0A0MS02 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRGV1A0A0A0MS02 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV1A0A0A0MS02 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.4■□□□□ 0.06
TRGV1A0A0A0MS02 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.4■□□□□ 0.06
TRGV1A0A0A0MS02 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 AP001330.3-201ENST00000520123 633 ntBASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 AF213884.3-201ENST00000563833 479 ntBASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 TSPY26P-201ENST00000476365 1326 ntBASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV1A0A0A0MS02 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 CLDN5-201ENST00000403084 2357 ntBASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 AL139246.5-201ENST00000606645 996 ntBASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV1A0A0A0MS02 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms