RNA–Protein interactions for RNA: ENST00000278715.7

HMBS-201, Transcript of hydroxymethylbilane synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBS, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-201ENST00000278715 NISCHQ9Y2I1 1504 aa50.82■■■■■ 5.73
HMBS-201ENST00000278715 CCDC180Q9P1Z9 1646 aa44.74■■■■■ 4.75
HMBS-201ENST00000278715 ABCC9O60706 1549 aa42.95■■■■■ 4.47
HMBS-201ENST00000278715 ZCCHC6Q5VYS8 1495 aaKnown RBP42.49■■■■■ 4.39
HMBS-201ENST00000278715 DCAF1Q9Y4B6 1507 aa42.13■■■■■ 4.33
HMBS-201ENST00000278715 DCAF8L2P0C7V8 631 aa42.09■■■■■ 4.33
HMBS-201ENST00000278715 MYO15BQ96JP2 1530 aa42.01■■■■■ 4.32
HMBS-201ENST00000278715 NACADO15069 1562 aa41.92■■■■■ 4.3
HMBS-201ENST00000278715 RB1CC1Q8TDY2 1594 aa41.72■■■■■ 4.27
HMBS-201ENST00000278715 SCRIBQ14160 1630 aa40.84■■■■■ 4.13
HMBS-201ENST00000278715 UNC13AQ9UPW8 1703 aa40.71■■■■■ 4.11
HMBS-201ENST00000278715 SHROOM4Q9ULL8 1493 aa40.59■■■■■ 4.09
HMBS-201ENST00000278715 BICRAQ9NZM4 1560 aa40.43■■■■■ 4.06
HMBS-201ENST00000278715 PABPN1Q86U42 306 aaKnown RBP eCLIP40.32■■■■■ 4.05
HMBS-201ENST00000278715 CECR2Q9BXF3 1484 aa39.47■■■■□ 3.91
HMBS-201ENST00000278715 BAZ1AQ9NRL2 1556 aaPredicted RBP39.31■■■■□ 3.88
HMBS-201ENST00000278715 EIF4G1Q04637 1599 aaKnown RBP39.28■■■■□ 3.88
HMBS-201ENST00000278715 SMARCA4P51532 1647 aa39.2■■■■□ 3.87
HMBS-201ENST00000278715 MROH2BQ7Z745 1585 aa39.15■■■■□ 3.86
HMBS-201ENST00000278715 RSF1Q96T23 1441 aaPredicted RBP39.06■■■■□ 3.84
HMBS-201ENST00000278715 CC2D2AQ9P2K1 1620 aa38.89■■■■□ 3.82
HMBS-201ENST00000278715 PEG3Q9GZU2 1588 aa38.86■■■■□ 3.81
HMBS-201ENST00000278715 ATAD2BQ9ULI0 1458 aa38.82■■■■□ 3.81
HMBS-201ENST00000278715 SMARCA2P51531 1590 aa38.8■■■■□ 3.8
HMBS-201ENST00000278715 WIZO95785 1651 aa38.73■■■■□ 3.79
HMBS-201ENST00000278715 DNAJC5BQ9UF47 199 aa38.72■■■■□ 3.79
HMBS-201ENST00000278715 NCAPD3P42695 1498 aa38.72■■■■□ 3.79
HMBS-201ENST00000278715 SUPT5HO00267 1087 aaKnown RBP38.68■■■■□ 3.78
HMBS-201ENST00000278715 HMGXB3Q12766 1538 aa38.54■■■■□ 3.76
HMBS-201ENST00000278715 BAZ1BQ9UIG0 1483 aaKnown RBP38.51■■■■□ 3.76
HMBS-201ENST00000278715 TOP2AP11388 1531 aaKnown RBP38.4■■■■□ 3.74
HMBS-201ENST00000278715 CCDC88BA6NC98 1476 aa37.99■■■■□ 3.67
HMBS-201ENST00000278715 CADPSQ9ULU8 1353 aa37.62■■■■□ 3.61
HMBS-201ENST00000278715 CFTRP13569 1480 aa37.57■■■■□ 3.61
HMBS-201ENST00000278715 LAMC3Q9Y6N6 1575 aa37.49■■■■□ 3.59
HMBS-201ENST00000278715 NESP48681 1621 aa37.42■■■■□ 3.58
HMBS-201ENST00000278715 PDS5BQ9NTI5 1447 aa37.25■■■■□ 3.55
HMBS-201ENST00000278715 PRDM2Q13029 1718 aa37.23■■■■□ 3.55
HMBS-201ENST00000278715 FANCD2Q9BXW9 1451 aa37.14■■■■□ 3.54
HMBS-201ENST00000278715 CEP164Q9UPV0 1460 aa36.99■■■■□ 3.51
HMBS-201ENST00000278715 ERCC6Q03468 1493 aa36.95■■■■□ 3.51
HMBS-201ENST00000278715 KIF21AQ7Z4S6 1674 aa36.95■■■■□ 3.51
HMBS-201ENST00000278715 WRNQ14191 1432 aaPredicted RBP eCLIP36.78■■■■□ 3.48
HMBS-201ENST00000278715 ABCC8Q09428 1581 aa36.78■■■■□ 3.48
HMBS-201ENST00000278715 MRC2Q9UBG0 1479 aa36.77■■■■□ 3.48
HMBS-201ENST00000278715 URB2Q14146 1524 aaKnown RBP36.7■■■■□ 3.47
HMBS-201ENST00000278715 CHIC1Q5VXU3 224 aa36.68■■■■□ 3.46
HMBS-201ENST00000278715 CUX1P39880 1505 aa36.67■■■■□ 3.46
HMBS-201ENST00000278715 DNMBPQ6XZF7 1577 aa36.66■■■■□ 3.46
HMBS-201ENST00000278715 THOC2Q8NI27 1593 aaKnown RBP36.65■■■■□ 3.46
HMBS-201ENST00000278715 TOPBP1Q92547 1522 aa36.63■■■■□ 3.46
HMBS-201ENST00000278715 WDR62O43379 1518 aa36.61■■■■□ 3.45
HMBS-201ENST00000278715 TOP2BQ02880 1626 aa36.59■■■■□ 3.45
HMBS-201ENST00000278715 SYNJ1O43426 1573 aa36.59■■■■□ 3.45
HMBS-201ENST00000278715 BIVM-ERCC5R4GMW8 1640 aa36.55■■■■□ 3.44
HMBS-201ENST00000278715 TRIM41Q8WV44 630 aa36.54■■■■□ 3.44
HMBS-201ENST00000278715 FGD5Q6ZNL6 1462 aa36.4■■■■□ 3.42
HMBS-201ENST00000278715 POLA1P09884 1462 aaPredicted RBP36.39■■■■□ 3.42
HMBS-201ENST00000278715 CUX2O14529 1486 aa36.3■■■■□ 3.4
HMBS-201ENST00000278715 SOGA1O94964 1423 aa36.28■■■■□ 3.4
HMBS-201ENST00000278715 IFT140Q96RY7 1462 aa36.21■■■■□ 3.39
HMBS-201ENST00000278715 RAD54L2Q9Y4B4 1467 aa36.21■■■■□ 3.39
HMBS-201ENST00000278715 TARBP1Q13395 1621 aaKnown RBP36.16■■■■□ 3.38
HMBS-201ENST00000278715 ABCA10Q8WWZ4 1543 aa36.14■■■■□ 3.38
HMBS-201ENST00000278715 WDR97A6NE52 1622 aa36.02■■■■□ 3.36
HMBS-201ENST00000278715 KIF27Q86VH2 1401 aa35.97■■■■□ 3.35
HMBS-201ENST00000278715 TDRD9Q8NDG6 1382 aaKnown RBP35.96■■■■□ 3.35
HMBS-201ENST00000278715 ZNF608Q9ULD9 1512 aaPredicted RBP35.94■■■■□ 3.34
HMBS-201ENST00000278715 EEA1Q15075 1411 aa35.88■■■■□ 3.33
HMBS-201ENST00000278715 AQRO60306 1485 aaKnown RBP eCLIP35.87■■■■□ 3.338e-8■■■■■ 27.7
HMBS-201ENST00000278715 GAPVD1Q14C86 1478 aa35.86■■■■□ 3.33
HMBS-201ENST00000278715 RUSC2Q8N2Y8 1516 aa35.86■■■■□ 3.33
HMBS-201ENST00000278715 ABCA5Q8WWZ7 1642 aa35.86■■■■□ 3.33
HMBS-201ENST00000278715 EIF4G3O43432 1585 aaKnown RBP35.79■■■■□ 3.32
HMBS-201ENST00000278715 IGF1RP08069 1367 aa35.76■■■■□ 3.31
HMBS-201ENST00000278715 GRIN2BQ13224 1484 aa35.74■■■■□ 3.31
HMBS-201ENST00000278715 ERICH3Q5RHP9 1530 aa35.72■■■■□ 3.31
HMBS-201ENST00000278715 CSRNP3Q8WYN3 585 aa35.72■■■■□ 3.31
HMBS-201ENST00000278715 FAM9AQ8IZU1 332 aaPredicted RBP35.69■■■■□ 3.3
HMBS-201ENST00000278715 PBRM1Q86U86 1689 aa35.63■■■■□ 3.29
HMBS-201ENST00000278715 MAGI1Q96QZ7 1491 aaPredicted RBP35.56■■■■□ 3.28
HMBS-201ENST00000278715 CARMIL1Q5VZK9 1371 aa35.54■■■■□ 3.28
HMBS-201ENST00000278715 SNAPC4Q5SXM2 1469 aa35.53■■■■□ 3.28
HMBS-201ENST00000278715 PRXQ9BXM0 1461 aa35.51■■■■□ 3.27
HMBS-201ENST00000278715 CUL7Q14999 1698 aa35.51■■■■□ 3.27
HMBS-201ENST00000278715 FHAD1B1AJZ9 1412 aa35.5■■■■□ 3.27
HMBS-201ENST00000278715 ADAMTS12P58397 1594 aa35.44■■■■□ 3.26
HMBS-201ENST00000278715 SYNJ2O15056 1496 aa35.41■■■■□ 3.26
HMBS-201ENST00000278715 RAPGEF2Q9Y4G8 1499 aa35.4■■■■□ 3.26
HMBS-201ENST00000278715 KIF21BO75037 1637 aa35.36■■■■□ 3.25
HMBS-201ENST00000278715 CHMP7Q8WUX9 453 aaPredicted RBP35.35■■■■□ 3.25
HMBS-201ENST00000278715 GRIN2AQ12879 1464 aa35.27■■■■□ 3.24
HMBS-201ENST00000278715 FBLN2P98095 1184 aa35.27■■■■□ 3.24
HMBS-201ENST00000278715 GOLGA3Q08378 1498 aa35.25■■■■□ 3.23
HMBS-201ENST00000278715 CHD1O14646 1710 aa35.15■■■■□ 3.22
HMBS-201ENST00000278715 LOC105371045A0A1W2PR82 267 aa35.14■■■■□ 3.22
HMBS-201ENST00000278715 NUP160Q12769 1436 aa35.11■■■■□ 3.21
HMBS-201ENST00000278715 UBTFP17480 764 aaKnown RBP35.1■■■■□ 3.21
HMBS-201ENST00000278715 EHMT2Q96KQ7 1210 aa35.1■■■■□ 3.21
HMBS-201ENST00000278715 TNIKQ9UKE5 1360 aa35.02■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms