Protein–RNA interactions for Protein: Q9BZQ2

SHCBP1L, Testicular spindle-associated protein SHCBP1L, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1LQ9BZQ2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.02■□□□□ 0.96
SHCBP1LQ9BZQ2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
SHCBP1LQ9BZQ2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHCBP1LQ9BZQ2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHCBP1LQ9BZQ2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHCBP1LQ9BZQ2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SHCBP1LQ9BZQ2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.01■□□□□ 0.95
SHCBP1LQ9BZQ2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SHCBP1LQ9BZQ2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHCBP1LQ9BZQ2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHCBP1LQ9BZQ2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SHCBP1LQ9BZQ2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHCBP1LQ9BZQ2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHCBP1LQ9BZQ2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHCBP1LQ9BZQ2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHCBP1LQ9BZQ2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHCBP1LQ9BZQ2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHCBP1LQ9BZQ2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SHCBP1LQ9BZQ2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.99■□□□□ 0.95
SHCBP1LQ9BZQ2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHCBP1LQ9BZQ2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHCBP1LQ9BZQ2 OR7E47P-201ENST00000546390 1422 ntBASIC20.99■□□□□ 0.95
SHCBP1LQ9BZQ2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHCBP1LQ9BZQ2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHCBP1LQ9BZQ2 AL356740.2-201ENST00000601559 647 ntBASIC20.99■□□□□ 0.95
SHCBP1LQ9BZQ2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.99■□□□□ 0.95
SHCBP1LQ9BZQ2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.99■□□□□ 0.95
SHCBP1LQ9BZQ2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHCBP1LQ9BZQ2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHCBP1LQ9BZQ2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.97■□□□□ 0.95
SHCBP1LQ9BZQ2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 MIR3181-201ENST00000578512 73 ntBASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 MIR3621-201ENST00000580529 85 ntBASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHCBP1LQ9BZQ2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SHCBP1LQ9BZQ2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms