Protein–RNA interactions for Protein: P04156

PRNP, Major prion protein, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRNPP04156 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PRNPP04156 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PRNPP04156 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PRNPP04156 KRT18P20-201ENST00000548986 1279 ntBASIC21.45■■□□□ 1.02
PRNPP04156 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PRNPP04156 AC011767.1-201ENST00000617410 1153 ntBASIC21.45■■□□□ 1.02
PRNPP04156 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.45■■□□□ 1.02
PRNPP04156 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.45■■□□□ 1.02
PRNPP04156 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRNPP04156 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRNPP04156 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.45■■□□□ 1.02
PRNPP04156 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRNPP04156 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRNPP04156 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.44■■□□□ 1.02
PRNPP04156 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
PRNPP04156 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRNPP04156 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PRNPP04156 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRNPP04156 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PRNPP04156 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.44■■□□□ 1.02
PRNPP04156 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.44■■□□□ 1.02
PRNPP04156 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PRNPP04156 AC073111.5-205ENST00000641717 521 ntBASIC21.44■■□□□ 1.02
PRNPP04156 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRNPP04156 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRNPP04156 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRNPP04156 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.44■■□□□ 1.02
PRNPP04156 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.44■■□□□ 1.02
PRNPP04156 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PRNPP04156 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRNPP04156 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRNPP04156 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRNPP04156 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.43■■□□□ 1.02
PRNPP04156 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PRNPP04156 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.43■■□□□ 1.02
PRNPP04156 UBE2DNL-204ENST00000602536 740 ntBASIC21.43■■□□□ 1.02
PRNPP04156 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PRNPP04156 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
PRNPP04156 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRNPP04156 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PRNPP04156 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRNPP04156 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRNPP04156 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRNPP04156 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRNPP04156 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRNPP04156 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
PRNPP04156 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.42■■□□□ 1.02
PRNPP04156 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.42■■□□□ 1.02
PRNPP04156 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PRNPP04156 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.42■■□□□ 1.02
PRNPP04156 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
PRNPP04156 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.42■■□□□ 1.02
PRNPP04156 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRNPP04156 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRNPP04156 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRNPP04156 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.41■■□□□ 1.02
PRNPP04156 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRNPP04156 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRNPP04156 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.41■■□□□ 1.02
PRNPP04156 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PRNPP04156 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.41■■□□□ 1.02
PRNPP04156 CDCA4P2-201ENST00000441182 718 ntBASIC21.41■■□□□ 1.02
PRNPP04156 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.41■■□□□ 1.02
PRNPP04156 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.41■■□□□ 1.02
PRNPP04156 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.41■■□□□ 1.02
PRNPP04156 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.41■■□□□ 1.02
PRNPP04156 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.41■■□□□ 1.02
PRNPP04156 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRNPP04156 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.41■■□□□ 1.02
PRNPP04156 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRNPP04156 MYCNOS-205ENST00000641950 531 ntBASIC21.41■■□□□ 1.02
PRNPP04156 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
PRNPP04156 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRNPP04156 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PRNPP04156 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
PRNPP04156 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRNPP04156 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.4■■□□□ 1.02
PRNPP04156 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRNPP04156 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
PRNPP04156 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PRNPP04156 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.4■■□□□ 1.02
PRNPP04156 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRNPP04156 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PRNPP04156 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PRNPP04156 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRNPP04156 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRNPP04156 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRNPP04156 AC026185.1-201ENST00000445748 174 ntBASIC21.4■■□□□ 1.02
PRNPP04156 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.4■■□□□ 1.02
PRNPP04156 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.4■■□□□ 1.02
PRNPP04156 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PRNPP04156 MFSD11-216ENST00000590393 1141 ntBASIC21.4■■□□□ 1.02
PRNPP04156 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRNPP04156 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.4■■□□□ 1.02
PRNPP04156 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PRNPP04156 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
PRNPP04156 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRNPP04156 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRNPP04156 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PRNPP04156 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms