RNA–Protein interactions for RNA: ENST00000383018.7

SNRNP25-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SNRNP25, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-202ENST00000383018 NISCHQ9Y2I1 1504 aa51.49■■■■■ 5.83
SNRNP25-202ENST00000383018 CCDC180Q9P1Z9 1646 aa45.77■■■■■ 4.92
SNRNP25-202ENST00000383018 ABCC9O60706 1549 aa44.85■■■■■ 4.77
SNRNP25-202ENST00000383018 RB1CC1Q8TDY2 1594 aa43.1■■■■■ 4.49
SNRNP25-202ENST00000383018 NACADO15069 1562 aa43.07■■■■■ 4.49
SNRNP25-202ENST00000383018 DCAF8L2P0C7V8 631 aa42.92■■■■■ 4.46
SNRNP25-202ENST00000383018 ZCCHC6Q5VYS8 1495 aaKnown RBP42.87■■■■■ 4.45
SNRNP25-202ENST00000383018 MYO15BQ96JP2 1530 aa42.84■■■■■ 4.45
SNRNP25-202ENST00000383018 DCAF1Q9Y4B6 1507 aa42.62■■■■■ 4.41
SNRNP25-202ENST00000383018 UNC13AQ9UPW8 1703 aa42.21■■■■■ 4.35
SNRNP25-202ENST00000383018 PABPN1Q86U42 306 aaKnown RBP eCLIP41.93■■■■■ 4.3
SNRNP25-202ENST00000383018 BICRAQ9NZM4 1560 aa41.92■■■■■ 4.3
SNRNP25-202ENST00000383018 SCRIBQ14160 1630 aa41.72■■■■■ 4.27
SNRNP25-202ENST00000383018 DNAJC5BQ9UF47 199 aa41.4■■■■■ 4.22
SNRNP25-202ENST00000383018 SHROOM4Q9ULL8 1493 aa41.38■■■■■ 4.21
SNRNP25-202ENST00000383018 EIF4G1Q04637 1599 aaKnown RBP40.74■■■■■ 4.11
SNRNP25-202ENST00000383018 CC2D2AQ9P2K1 1620 aa40.6■■■■■ 4.09
SNRNP25-202ENST00000383018 CECR2Q9BXF3 1484 aa40.32■■■■■ 4.04
SNRNP25-202ENST00000383018 SMARCA4P51532 1647 aa39.94■■■■□ 3.99
SNRNP25-202ENST00000383018 BAZ1AQ9NRL2 1556 aaPredicted RBP39.86■■■■□ 3.97
SNRNP25-202ENST00000383018 NCAPD3P42695 1498 aa39.8■■■■□ 3.96
SNRNP25-202ENST00000383018 ATAD2BQ9ULI0 1458 aa39.78■■■■□ 3.96
SNRNP25-202ENST00000383018 MROH2BQ7Z745 1585 aa39.7■■■■□ 3.95
SNRNP25-202ENST00000383018 SMARCA2P51531 1590 aa39.67■■■■□ 3.94
SNRNP25-202ENST00000383018 PEG3Q9GZU2 1588 aa39.61■■■■□ 3.93
SNRNP25-202ENST00000383018 HMGXB3Q12766 1538 aa39.53■■■■□ 3.92
SNRNP25-202ENST00000383018 BAZ1BQ9UIG0 1483 aaKnown RBP39.37■■■■□ 3.89
SNRNP25-202ENST00000383018 WIZO95785 1651 aa39.24■■■■□ 3.87
SNRNP25-202ENST00000383018 RSF1Q96T23 1441 aaPredicted RBP39.22■■■■□ 3.87
SNRNP25-202ENST00000383018 NESP48681 1621 aa38.84■■■■□ 3.81
SNRNP25-202ENST00000383018 TOP2AP11388 1531 aaKnown RBP38.79■■■■□ 3.8
SNRNP25-202ENST00000383018 LAMC3Q9Y6N6 1575 aa38.69■■■■□ 3.78
SNRNP25-202ENST00000383018 CADPSQ9ULU8 1353 aa38.6■■■■□ 3.77
SNRNP25-202ENST00000383018 ERCC6Q03468 1493 aa38.59■■■■□ 3.77
SNRNP25-202ENST00000383018 PDS5BQ9NTI5 1447 aa38.41■■■■□ 3.74
SNRNP25-202ENST00000383018 CCDC88BA6NC98 1476 aa38.38■■■■□ 3.73
SNRNP25-202ENST00000383018 CFTRP13569 1480 aa38.37■■■■□ 3.73
SNRNP25-202ENST00000383018 KIF21AQ7Z4S6 1674 aa38.34■■■■□ 3.73
SNRNP25-202ENST00000383018 CUX2O14529 1486 aa38.3■■■■□ 3.72
SNRNP25-202ENST00000383018 THOC2Q8NI27 1593 aaKnown RBP38.26■■■■□ 3.72
SNRNP25-202ENST00000383018 FANCD2Q9BXW9 1451 aa38.12■■■■□ 3.69
SNRNP25-202ENST00000383018 CEP164Q9UPV0 1460 aa38.05■■■■□ 3.68
SNRNP25-202ENST00000383018 SUPT5HO00267 1087 aaKnown RBP38.04■■■■□ 3.68
SNRNP25-202ENST00000383018 MRC2Q9UBG0 1479 aa38.03■■■■□ 3.68
SNRNP25-202ENST00000383018 PRDM2Q13029 1718 aa38.02■■■■□ 3.68
SNRNP25-202ENST00000383018 WDR62O43379 1518 aa37.95■■■■□ 3.67
SNRNP25-202ENST00000383018 URB2Q14146 1524 aaKnown RBP37.79■■■■□ 3.64
SNRNP25-202ENST00000383018 TOPBP1Q92547 1522 aa37.52■■■■□ 3.6
SNRNP25-202ENST00000383018 ABCC8Q09428 1581 aa37.48■■■■□ 3.59
SNRNP25-202ENST00000383018 DNMBPQ6XZF7 1577 aa37.45■■■■□ 3.59
SNRNP25-202ENST00000383018 DNAJC5Q9H3Z4 198 aa37.3■■■■□ 3.56
SNRNP25-202ENST00000383018 IFT140Q96RY7 1462 aa37.28■■■■□ 3.56
SNRNP25-202ENST00000383018 CUX1P39880 1505 aa37.23■■■■□ 3.55
SNRNP25-202ENST00000383018 POLA1P09884 1462 aaPredicted RBP37.2■■■■□ 3.55
SNRNP25-202ENST00000383018 ZNF608Q9ULD9 1512 aaPredicted RBP37.17■■■■□ 3.54
SNRNP25-202ENST00000383018 TARBP1Q13395 1621 aaKnown RBP37.16■■■■□ 3.54
SNRNP25-202ENST00000383018 FGD5Q6ZNL6 1462 aa37.08■■■■□ 3.53
SNRNP25-202ENST00000383018 RAD54L2Q9Y4B4 1467 aa37.05■■■■□ 3.52
SNRNP25-202ENST00000383018 SOGA1O94964 1423 aa37.03■■■■□ 3.52
SNRNP25-202ENST00000383018 EIF4G3O43432 1585 aaKnown RBP36.96■■■■□ 3.51
SNRNP25-202ENST00000383018 AQRO60306 1485 aaKnown RBP eCLIP36.94■■■■□ 3.51e-7■■■■■ 49.5
SNRNP25-202ENST00000383018 WRNQ14191 1432 aaPredicted RBP eCLIP36.91■■■■□ 3.5
SNRNP25-202ENST00000383018 TOP2BQ02880 1626 aa36.87■■■■□ 3.49
SNRNP25-202ENST00000383018 BIVM-ERCC5R4GMW8 1640 aa36.87■■■■□ 3.49
SNRNP25-202ENST00000383018 SYNJ1O43426 1573 aa36.86■■■■□ 3.49
SNRNP25-202ENST00000383018 TDRD9Q8NDG6 1382 aaKnown RBP36.84■■■■□ 3.49
SNRNP25-202ENST00000383018 WDR97A6NE52 1622 aa36.81■■■■□ 3.48
SNRNP25-202ENST00000383018 ABCA10Q8WWZ4 1543 aa36.75■■■■□ 3.47
SNRNP25-202ENST00000383018 OSCARQ8IYS5 282 aa36.7■■■■□ 3.47
SNRNP25-202ENST00000383018 ABCA5Q8WWZ7 1642 aa36.6■■■■□ 3.45
SNRNP25-202ENST00000383018 GRIN2BQ13224 1484 aa36.6■■■■□ 3.45
SNRNP25-202ENST00000383018 GAPVD1Q14C86 1478 aa36.6■■■■□ 3.45
SNRNP25-202ENST00000383018 SNAPC4Q5SXM2 1469 aa36.56■■■■□ 3.44
SNRNP25-202ENST00000383018 CHD1O14646 1710 aa36.53■■■■□ 3.44
SNRNP25-202ENST00000383018 PBRM1Q86U86 1689 aa36.51■■■■□ 3.43
SNRNP25-202ENST00000383018 MAGI1Q96QZ7 1491 aaPredicted RBP36.5■■■■□ 3.43
SNRNP25-202ENST00000383018 FBLN2P98095 1184 aa36.4■■■■□ 3.42
SNRNP25-202ENST00000383018 SYNJ2O15056 1496 aa36.37■■■■□ 3.41
SNRNP25-202ENST00000383018 CHMP7Q8WUX9 453 aaPredicted RBP36.33■■■■□ 3.41
SNRNP25-202ENST00000383018 ERICH3Q5RHP9 1530 aa36.29■■■■□ 3.4
SNRNP25-202ENST00000383018 ADAMTS12P58397 1594 aa36.23■■■■□ 3.39
SNRNP25-202ENST00000383018 CLASP1Q7Z460 1538 aa36.18■■■■□ 3.38
SNRNP25-202ENST00000383018 FHAD1B1AJZ9 1412 aa36.17■■■■□ 3.38
SNRNP25-202ENST00000383018 GRIN2AQ12879 1464 aa36.13■■■■□ 3.37
SNRNP25-202ENST00000383018 RIMBP3CA6NJZ7 1639 aa36.13■■■■□ 3.37
SNRNP25-202ENST00000383018 RIMBP3BA6NNM3 1639 aa36.13■■■■□ 3.37
SNRNP25-202ENST00000383018 RIMBP3Q9UFD9 1639 aa36.13■■■■□ 3.37
SNRNP25-202ENST00000383018 KIF27Q86VH2 1401 aa36.13■■■■□ 3.37
SNRNP25-202ENST00000383018 ARHGEF11O15085 1522 aa36.11■■■■□ 3.37
SNRNP25-202ENST00000383018 IGF1RP08069 1367 aa36.09■■■■□ 3.37
SNRNP25-202ENST00000383018 NUP160Q12769 1436 aa36.02■■■■□ 3.36
SNRNP25-202ENST00000383018 CEP170Q5SW79 1584 aa35.98■■■■□ 3.35
SNRNP25-202ENST00000383018 TRIM41Q8WV44 630 aa35.93■■■■□ 3.34
SNRNP25-202ENST00000383018 CUL7Q14999 1698 aa35.9■■■■□ 3.34
SNRNP25-202ENST00000383018 RUSC2Q8N2Y8 1516 aa35.88■■■■□ 3.33
SNRNP25-202ENST00000383018 ARAP1Q96P48 1450 aa35.84■■■■□ 3.33
SNRNP25-202ENST00000383018 CARMIL1Q5VZK9 1371 aa35.82■■■■□ 3.32
SNRNP25-202ENST00000383018 CYB5RLQ6IPT4 315 aa35.77■■■■□ 3.32
SNRNP25-202ENST00000383018 SHROOM2Q13796 1616 aa35.76■■■■□ 3.32
SNRNP25-202ENST00000383018 ERCC6L2Q5T890 1561 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms