Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
COL17A1Q9UMD9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC32.93■■■□□ 2.86
COL17A1Q9UMD9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC32.93■■■□□ 2.86
COL17A1Q9UMD9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
COL17A1Q9UMD9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC32.93■■■□□ 2.86
COL17A1Q9UMD9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC32.92■■■□□ 2.86
COL17A1Q9UMD9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
COL17A1Q9UMD9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
COL17A1Q9UMD9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC32.92■■■□□ 2.86
COL17A1Q9UMD9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
COL17A1Q9UMD9 RCN1P1-201ENST00000400413 996 ntBASIC32.92■■■□□ 2.86
COL17A1Q9UMD9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC32.92■■■□□ 2.86
COL17A1Q9UMD9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
COL17A1Q9UMD9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
COL17A1Q9UMD9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC32.91■■■□□ 2.86
COL17A1Q9UMD9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
COL17A1Q9UMD9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC32.91■■■□□ 2.86
COL17A1Q9UMD9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
COL17A1Q9UMD9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC32.9■■■□□ 2.86
COL17A1Q9UMD9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC32.89■■■□□ 2.86
COL17A1Q9UMD9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
COL17A1Q9UMD9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC32.89■■■□□ 2.86
COL17A1Q9UMD9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC32.89■■■□□ 2.86
COL17A1Q9UMD9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC32.89■■■□□ 2.86
COL17A1Q9UMD9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
COL17A1Q9UMD9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC32.89■■■□□ 2.86
COL17A1Q9UMD9 AC135731.1-201ENST00000569415 2548 ntBASIC32.88■■■□□ 2.85
COL17A1Q9UMD9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
COL17A1Q9UMD9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC32.88■■■□□ 2.85
COL17A1Q9UMD9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC32.88■■■□□ 2.85
COL17A1Q9UMD9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC32.88■■■□□ 2.85
COL17A1Q9UMD9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC32.88■■■□□ 2.85
COL17A1Q9UMD9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
COL17A1Q9UMD9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
COL17A1Q9UMD9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC32.88■■■□□ 2.85
COL17A1Q9UMD9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC32.87■■■□□ 2.85
COL17A1Q9UMD9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC32.87■■■□□ 2.85
COL17A1Q9UMD9 CYP2T3P-201ENST00000601990 817 ntBASIC32.87■■■□□ 2.85
COL17A1Q9UMD9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC32.87■■■□□ 2.85
COL17A1Q9UMD9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85
COL17A1Q9UMD9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC32.86■■■□□ 2.85
COL17A1Q9UMD9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
COL17A1Q9UMD9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
COL17A1Q9UMD9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC32.86■■■□□ 2.85
COL17A1Q9UMD9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC32.86■■■□□ 2.85
COL17A1Q9UMD9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
COL17A1Q9UMD9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
COL17A1Q9UMD9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
COL17A1Q9UMD9 TK2-213ENST00000563369 882 ntTSL 5 BASIC32.86■■■□□ 2.85
COL17A1Q9UMD9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC32.86■■■□□ 2.85
COL17A1Q9UMD9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC32.86■■■□□ 2.85
COL17A1Q9UMD9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC32.86■■■□□ 2.85
COL17A1Q9UMD9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC32.85■■■□□ 2.85
COL17A1Q9UMD9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
COL17A1Q9UMD9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
COL17A1Q9UMD9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC32.85■■■□□ 2.85
COL17A1Q9UMD9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC32.85■■■□□ 2.85
COL17A1Q9UMD9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC32.85■■■□□ 2.85
COL17A1Q9UMD9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
COL17A1Q9UMD9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
COL17A1Q9UMD9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
COL17A1Q9UMD9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
COL17A1Q9UMD9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
COL17A1Q9UMD9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
COL17A1Q9UMD9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
COL17A1Q9UMD9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
COL17A1Q9UMD9 C1QBPP2-201ENST00000528754 825 ntBASIC32.84■■■□□ 2.85
COL17A1Q9UMD9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC32.84■■■□□ 2.85
COL17A1Q9UMD9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
COL17A1Q9UMD9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
COL17A1Q9UMD9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC32.83■■■□□ 2.85
COL17A1Q9UMD9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
COL17A1Q9UMD9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC32.83■■■□□ 2.85
COL17A1Q9UMD9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
COL17A1Q9UMD9 FAM197Y4-202ENST00000622692 608 ntBASIC32.83■■■□□ 2.85
COL17A1Q9UMD9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC32.83■■■□□ 2.85
COL17A1Q9UMD9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC32.82■■■□□ 2.85
COL17A1Q9UMD9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC32.82■■■□□ 2.84
COL17A1Q9UMD9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC32.82■■■□□ 2.84
COL17A1Q9UMD9 AC233263.1-201ENST00000578059 224 ntBASIC32.82■■■□□ 2.84
COL17A1Q9UMD9 AC012306.2-201ENST00000609350 630 ntBASIC32.82■■■□□ 2.84
COL17A1Q9UMD9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
COL17A1Q9UMD9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC32.82■■■□□ 2.84
COL17A1Q9UMD9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
COL17A1Q9UMD9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms