RNA–Protein interactions for RNA: ENST00000601435.1

CLDND2-203, Transcript of claudin domain containing 2, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLDND2, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2-203ENST00000601435 NISCHQ9Y2I1 1504 aa48.32■■■■■ 5.33
CLDND2-203ENST00000601435 ABCC9O60706 1549 aa43.61■■■■■ 4.57
CLDND2-203ENST00000601435 CCDC180Q9P1Z9 1646 aa43.48■■■■■ 4.55
CLDND2-203ENST00000601435 RB1CC1Q8TDY2 1594 aa41.42■■■■■ 4.22
CLDND2-203ENST00000601435 NACADO15069 1562 aa41.09■■■■■ 4.17
CLDND2-203ENST00000601435 DNAJC5BQ9UF47 199 aa41.03■■■■■ 4.16
CLDND2-203ENST00000601435 DCAF8L2P0C7V8 631 aa40.75■■■■■ 4.11
CLDND2-203ENST00000601435 UNC13AQ9UPW8 1703 aa40.63■■■■■ 4.09
CLDND2-203ENST00000601435 PABPN1Q86U42 306 aaKnown RBP eCLIP40.53■■■■■ 4.082e-10■■■■□ 20.1
CLDND2-203ENST00000601435 MYO15BQ96JP2 1530 aa40.45■■■■■ 4.07
CLDND2-203ENST00000601435 BICRAQ9NZM4 1560 aa40.29■■■■■ 4.04
CLDND2-203ENST00000601435 ZCCHC6Q5VYS8 1495 aaKnown RBP40.04■■■■■ 4
CLDND2-203ENST00000601435 DCAF1Q9Y4B6 1507 aa39.89■■■■□ 3.98
CLDND2-203ENST00000601435 SHROOM4Q9ULL8 1493 aa39.64■■■■□ 3.94
CLDND2-203ENST00000601435 SCRIBQ14160 1630 aa39.63■■■■□ 3.93
CLDND2-203ENST00000601435 CC2D2AQ9P2K1 1620 aa39.42■■■■□ 3.9
CLDND2-203ENST00000601435 EIF4G1Q04637 1599 aaKnown RBP39.29■■■■□ 3.88
CLDND2-203ENST00000601435 CECR2Q9BXF3 1484 aa39.28■■■■□ 3.88
CLDND2-203ENST00000601435 NCAPD3P42695 1498 aa37.91■■■■□ 3.66
CLDND2-203ENST00000601435 ATAD2BQ9ULI0 1458 aa37.8■■■■□ 3.64
CLDND2-203ENST00000601435 SMARCA4P51532 1647 aa37.77■■■■□ 3.64
CLDND2-203ENST00000601435 DNAJC5Q9H3Z4 198 aa37.74■■■■□ 3.63
CLDND2-203ENST00000601435 SMARCA2P51531 1590 aa37.68■■■■□ 3.62
CLDND2-203ENST00000601435 HMGXB3Q12766 1538 aa37.66■■■■□ 3.62
CLDND2-203ENST00000601435 ERCC6Q03468 1493 aa37.64■■■■□ 3.62
CLDND2-203ENST00000601435 CUX2O14529 1486 aa37.63■■■■□ 3.61
CLDND2-203ENST00000601435 BAZ1AQ9NRL2 1556 aaPredicted RBP37.51■■■■□ 3.6
CLDND2-203ENST00000601435 NESP48681 1621 aa37.44■■■■□ 3.58
CLDND2-203ENST00000601435 BAZ1BQ9UIG0 1483 aaKnown RBP37.43■■■■□ 3.58
CLDND2-203ENST00000601435 PEG3Q9GZU2 1588 aa37.38■■■■□ 3.58
CLDND2-203ENST00000601435 MROH2BQ7Z745 1585 aa37.25■■■■□ 3.55
CLDND2-203ENST00000601435 THOC2Q8NI27 1593 aaKnown RBP37.14■■■■□ 3.54
CLDND2-203ENST00000601435 LAMC3Q9Y6N6 1575 aa37.12■■■■□ 3.53
CLDND2-203ENST00000601435 KIF21AQ7Z4S6 1674 aa37.02■■■■□ 3.52
CLDND2-203ENST00000601435 PDS5BQ9NTI5 1447 aa36.85■■■■□ 3.49
CLDND2-203ENST00000601435 WIZO95785 1651 aa36.83■■■■□ 3.49
CLDND2-203ENST00000601435 CADPSQ9ULU8 1353 aa36.74■■■■□ 3.47
CLDND2-203ENST00000601435 MRC2Q9UBG0 1479 aa36.61■■■■□ 3.45
CLDND2-203ENST00000601435 WDR62O43379 1518 aa36.55■■■■□ 3.44
CLDND2-203ENST00000601435 CEP164Q9UPV0 1460 aa36.42■■■■□ 3.42
CLDND2-203ENST00000601435 RSF1Q96T23 1441 aaPredicted RBP36.38■■■■□ 3.41
CLDND2-203ENST00000601435 FANCD2Q9BXW9 1451 aa36.37■■■■□ 3.41
CLDND2-203ENST00000601435 TOP2AP11388 1531 aaKnown RBP36.32■■■■□ 3.4
CLDND2-203ENST00000601435 CFTRP13569 1480 aa36.31■■■■□ 3.4
CLDND2-203ENST00000601435 URB2Q14146 1524 aaKnown RBP36.11■■■■□ 3.37
CLDND2-203ENST00000601435 PRDM2Q13029 1718 aa36.06■■■■□ 3.36
CLDND2-203ENST00000601435 TRIM41Q8WV44 630 aa36.04■■■■□ 3.36
CLDND2-203ENST00000601435 CCDC88BA6NC98 1476 aa35.88■■■■□ 3.33
CLDND2-203ENST00000601435 OSCARQ8IYS5 282 aa35.79■■■■□ 3.32
CLDND2-203ENST00000601435 ZNF608Q9ULD9 1512 aaPredicted RBP35.69■■■■□ 3.3
CLDND2-203ENST00000601435 TOPBP1Q92547 1522 aa35.67■■■■□ 3.3
CLDND2-203ENST00000601435 IFT140Q96RY7 1462 aa35.67■■■■□ 3.3
CLDND2-203ENST00000601435 DNMBPQ6XZF7 1577 aa35.54■■■■□ 3.28
CLDND2-203ENST00000601435 EIF4G3O43432 1585 aaKnown RBP35.52■■■■□ 3.28
CLDND2-203ENST00000601435 ABCC8Q09428 1581 aa35.51■■■■□ 3.27
CLDND2-203ENST00000601435 RIMBP3CA6NJZ7 1639 aa35.5■■■■□ 3.27
CLDND2-203ENST00000601435 RIMBP3BA6NNM3 1639 aa35.5■■■■□ 3.27
CLDND2-203ENST00000601435 RIMBP3Q9UFD9 1639 aa35.5■■■■□ 3.27
CLDND2-203ENST00000601435 TARBP1Q13395 1621 aaKnown RBP35.4■■■■□ 3.26
CLDND2-203ENST00000601435 ARHGEF11O15085 1522 aa35.35■■■■□ 3.25
CLDND2-203ENST00000601435 CHD1O14646 1710 aa35.32■■■■□ 3.25
CLDND2-203ENST00000601435 AQRO60306 1485 aaKnown RBP eCLIP35.3■■■■□ 3.24
CLDND2-203ENST00000601435 POLA1P09884 1462 aaPredicted RBP35.3■■■■□ 3.24
CLDND2-203ENST00000601435 RAD54L2Q9Y4B4 1467 aa35.17■■■■□ 3.22
CLDND2-203ENST00000601435 SOGA1O94964 1423 aa35.07■■■■□ 3.21
CLDND2-203ENST00000601435 FGD5Q6ZNL6 1462 aa35.06■■■■□ 3.2
CLDND2-203ENST00000601435 TDRD9Q8NDG6 1382 aaKnown RBP35.04■■■■□ 3.2
CLDND2-203ENST00000601435 FBLN2P98095 1184 aa35.04■■■■□ 3.2
CLDND2-203ENST00000601435 CUX1P39880 1505 aa35.02■■■■□ 3.2
CLDND2-203ENST00000601435 CYB5RLQ6IPT4 315 aa35■■■■□ 3.19
CLDND2-203ENST00000601435 ARAP1Q96P48 1450 aa35■■■■□ 3.19
CLDND2-203ENST00000601435 WDR97A6NE52 1622 aa34.99■■■■□ 3.19
CLDND2-203ENST00000601435 SNAPC4Q5SXM2 1469 aa34.97■■■■□ 3.19
CLDND2-203ENST00000601435 CLASP1Q7Z460 1538 aa34.86■■■■□ 3.17
CLDND2-203ENST00000601435 MAGI1Q96QZ7 1491 aaPredicted RBP34.84■■■■□ 3.17
CLDND2-203ENST00000601435 GRIN2BQ13224 1484 aa34.81■■■■□ 3.16
CLDND2-203ENST00000601435 SYNJ1O43426 1573 aa34.79■■■■□ 3.16
CLDND2-203ENST00000601435 PBRM1Q86U86 1689 aa34.78■■■■□ 3.16
CLDND2-203ENST00000601435 CHMP7Q8WUX9 453 aaPredicted RBP34.74■■■■□ 3.15
CLDND2-203ENST00000601435 SYNJ2O15056 1496 aa34.73■■■■□ 3.15
CLDND2-203ENST00000601435 GAPVD1Q14C86 1478 aa34.68■■■■□ 3.14
CLDND2-203ENST00000601435 TRHP20396 242 aaPredicted RBP34.66■■■■□ 3.14
CLDND2-203ENST00000601435 ABCA5Q8WWZ7 1642 aa34.66■■■■□ 3.14
CLDND2-203ENST00000601435 ABCA10Q8WWZ4 1543 aa34.63■■■■□ 3.13
CLDND2-203ENST00000601435 SUPT5HO00267 1087 aaKnown RBP34.58■■■■□ 3.13
CLDND2-203ENST00000601435 BIVM-ERCC5R4GMW8 1640 aa34.44■■■■□ 3.1
CLDND2-203ENST00000601435 ADAMTS12P58397 1594 aa34.41■■■■□ 3.1
CLDND2-203ENST00000601435 WRNQ14191 1432 aaPredicted RBP eCLIP34.41■■■■□ 3.1
CLDND2-203ENST00000601435 TOP2BQ02880 1626 aa34.41■■■■□ 3.1
CLDND2-203ENST00000601435 GRIN2AQ12879 1464 aa34.39■■■■□ 3.1
CLDND2-203ENST00000601435 ERCC6L2Q5T890 1561 aa34.34■■■■□ 3.09
CLDND2-203ENST00000601435 CEP170Q5SW79 1584 aa34.33■■■■□ 3.09
CLDND2-203ENST00000601435 NUP160Q12769 1436 aa34.28■■■■□ 3.08
CLDND2-203ENST00000601435 FHAD1B1AJZ9 1412 aa34.21■■■■□ 3.07
CLDND2-203ENST00000601435 SHROOM2Q13796 1616 aa34.2■■■■□ 3.07
CLDND2-203ENST00000601435 ERICH3Q5RHP9 1530 aa34.19■■■■□ 3.06
CLDND2-203ENST00000601435 PRG4Q92954 1404 aaPredicted RBP33.94■■■■□ 3.02
CLDND2-203ENST00000601435 RUSC2Q8N2Y8 1516 aa33.94■■■■□ 3.02
CLDND2-203ENST00000601435 KIF13AQ9H1H9 1805 aa33.87■■■■□ 3.01
CLDND2-203ENST00000601435 JPH4Q96JJ6 628 aa33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms