RNA–Protein interactions for RNA: ENST00000317459.10

TRPT1-201, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPT1, Length 962 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-201ENST00000317459 NISCHQ9Y2I1 1504 aa49.82■■■■■ 5.57
TRPT1-201ENST00000317459 CCDC180Q9P1Z9 1646 aa44.31■■■■■ 4.68
TRPT1-201ENST00000317459 ABCC9O60706 1549 aa43.51■■■■■ 4.56
TRPT1-201ENST00000317459 RB1CC1Q8TDY2 1594 aa41.79■■■■■ 4.28
TRPT1-201ENST00000317459 DCAF8L2P0C7V8 631 aa41.77■■■■■ 4.28
TRPT1-201ENST00000317459 NACADO15069 1562 aa41.71■■■■■ 4.27
TRPT1-201ENST00000317459 ZCCHC6Q5VYS8 1495 aaKnown RBP41.47■■■■■ 4.23
TRPT1-201ENST00000317459 MYO15BQ96JP2 1530 aa41.39■■■■■ 4.22
TRPT1-201ENST00000317459 DCAF1Q9Y4B6 1507 aa41.19■■■■■ 4.18
TRPT1-201ENST00000317459 UNC13AQ9UPW8 1703 aa40.77■■■■■ 4.12
TRPT1-201ENST00000317459 PABPN1Q86U42 306 aaKnown RBP eCLIP40.65■■■■■ 4.1
TRPT1-201ENST00000317459 BICRAQ9NZM4 1560 aa40.48■■■■■ 4.07
TRPT1-201ENST00000317459 SCRIBQ14160 1630 aa40.47■■■■■ 4.07
TRPT1-201ENST00000317459 SHROOM4Q9ULL8 1493 aa40.07■■■■■ 4.01
TRPT1-201ENST00000317459 DNAJC5BQ9UF47 199 aa39.97■■■■□ 3.99
TRPT1-201ENST00000317459 EIF4G1Q04637 1599 aaKnown RBP39.46■■■■□ 3.91
TRPT1-201ENST00000317459 CC2D2AQ9P2K1 1620 aa39.32■■■■□ 3.88
TRPT1-201ENST00000317459 CECR2Q9BXF3 1484 aa39.1■■■■□ 3.85
TRPT1-201ENST00000317459 SMARCA4P51532 1647 aa38.67■■■■□ 3.78
TRPT1-201ENST00000317459 BAZ1AQ9NRL2 1556 aaPredicted RBP38.63■■■■□ 3.77
TRPT1-201ENST00000317459 ATAD2BQ9ULI0 1458 aa38.5■■■■□ 3.75
TRPT1-201ENST00000317459 NCAPD3P42695 1498 aa38.47■■■■□ 3.75
TRPT1-201ENST00000317459 SMARCA2P51531 1590 aa38.45■■■■□ 3.75
TRPT1-201ENST00000317459 MROH2BQ7Z745 1585 aa38.4■■■■□ 3.74
TRPT1-201ENST00000317459 HMGXB3Q12766 1538 aa38.28■■■■□ 3.72
TRPT1-201ENST00000317459 PEG3Q9GZU2 1588 aa38.27■■■■□ 3.72
TRPT1-201ENST00000317459 BAZ1BQ9UIG0 1483 aaKnown RBP38.21■■■■□ 3.71
TRPT1-201ENST00000317459 WIZO95785 1651 aa37.97■■■■□ 3.67
TRPT1-201ENST00000317459 RSF1Q96T23 1441 aaPredicted RBP37.93■■■■□ 3.66
TRPT1-201ENST00000317459 NESP48681 1621 aa37.6■■■■□ 3.61
TRPT1-201ENST00000317459 TOP2AP11388 1531 aaKnown RBP37.58■■■■□ 3.61
TRPT1-201ENST00000317459 ERCC6Q03468 1493 aa37.54■■■■□ 3.6
TRPT1-201ENST00000317459 LAMC3Q9Y6N6 1575 aa37.48■■■■□ 3.59
TRPT1-201ENST00000317459 CADPSQ9ULU8 1353 aa37.38■■■■□ 3.57
TRPT1-201ENST00000317459 PDS5BQ9NTI5 1447 aa37.27■■■■□ 3.56
TRPT1-201ENST00000317459 CCDC88BA6NC98 1476 aa37.13■■■■□ 3.54
TRPT1-201ENST00000317459 KIF21AQ7Z4S6 1674 aa37.13■■■■□ 3.53
TRPT1-201ENST00000317459 CUX2O14529 1486 aa37.13■■■■□ 3.53
TRPT1-201ENST00000317459 CFTRP13569 1480 aa37.12■■■■□ 3.53
TRPT1-201ENST00000317459 THOC2Q8NI27 1593 aaKnown RBP37.03■■■■□ 3.52
TRPT1-201ENST00000317459 SUPT5HO00267 1087 aaKnown RBP36.98■■■■□ 3.51
TRPT1-201ENST00000317459 FANCD2Q9BXW9 1451 aa36.95■■■■□ 3.51
TRPT1-201ENST00000317459 CEP164Q9UPV0 1460 aa36.93■■■■□ 3.5
TRPT1-201ENST00000317459 MRC2Q9UBG0 1479 aa36.88■■■■□ 3.5
TRPT1-201ENST00000317459 PRDM2Q13029 1718 aa36.79■■■■□ 3.48
TRPT1-201ENST00000317459 WDR62O43379 1518 aa36.74■■■■□ 3.47
TRPT1-201ENST00000317459 URB2Q14146 1524 aaKnown RBP36.57■■■■□ 3.44
TRPT1-201ENST00000317459 ABCC8Q09428 1581 aa36.35■■■■□ 3.41
TRPT1-201ENST00000317459 TOPBP1Q92547 1522 aa36.34■■■■□ 3.41
TRPT1-201ENST00000317459 DNMBPQ6XZF7 1577 aa36.29■■■■□ 3.4
TRPT1-201ENST00000317459 IFT140Q96RY7 1462 aa36.15■■■■□ 3.38
TRPT1-201ENST00000317459 DNAJC5Q9H3Z4 198 aa36.1■■■■□ 3.37
TRPT1-201ENST00000317459 POLA1P09884 1462 aaPredicted RBP36.03■■■■□ 3.36
TRPT1-201ENST00000317459 CUX1P39880 1505 aa36.03■■■■□ 3.36
TRPT1-201ENST00000317459 ZNF608Q9ULD9 1512 aaPredicted RBP35.98■■■■□ 3.35
TRPT1-201ENST00000317459 FGD5Q6ZNL6 1462 aa35.94■■■■□ 3.34
TRPT1-201ENST00000317459 TARBP1Q13395 1621 aaKnown RBP35.92■■■■□ 3.34
TRPT1-201ENST00000317459 SOGA1O94964 1423 aa35.91■■■■□ 3.34
TRPT1-201ENST00000317459 RAD54L2Q9Y4B4 1467 aa35.88■■■■□ 3.33
TRPT1-201ENST00000317459 EIF4G3O43432 1585 aaKnown RBP35.83■■■■□ 3.33
TRPT1-201ENST00000317459 WRNQ14191 1432 aaPredicted RBP eCLIP35.79■■■■□ 3.32
TRPT1-201ENST00000317459 AQRO60306 1485 aaKnown RBP eCLIP35.78■■■■□ 3.326e-9■■■■■ 37.6
TRPT1-201ENST00000317459 TDRD9Q8NDG6 1382 aaKnown RBP35.71■■■■□ 3.31
TRPT1-201ENST00000317459 TOP2BQ02880 1626 aa35.68■■■■□ 3.3
TRPT1-201ENST00000317459 BIVM-ERCC5R4GMW8 1640 aa35.68■■■■□ 3.3
TRPT1-201ENST00000317459 SYNJ1O43426 1573 aa35.68■■■■□ 3.3
TRPT1-201ENST00000317459 WDR97A6NE52 1622 aa35.65■■■■□ 3.3
TRPT1-201ENST00000317459 OSCARQ8IYS5 282 aa35.6■■■■□ 3.29
TRPT1-201ENST00000317459 ABCA10Q8WWZ4 1543 aa35.57■■■■□ 3.29
TRPT1-201ENST00000317459 GRIN2BQ13224 1484 aa35.49■■■■□ 3.27
TRPT1-201ENST00000317459 GAPVD1Q14C86 1478 aa35.48■■■■□ 3.27
TRPT1-201ENST00000317459 SNAPC4Q5SXM2 1469 aa35.46■■■■□ 3.27
TRPT1-201ENST00000317459 FBLN2P98095 1184 aa35.44■■■■□ 3.26
TRPT1-201ENST00000317459 ABCA5Q8WWZ7 1642 aa35.43■■■■□ 3.26
TRPT1-201ENST00000317459 MAGI1Q96QZ7 1491 aaPredicted RBP35.4■■■■□ 3.26
TRPT1-201ENST00000317459 CHD1O14646 1710 aa35.38■■■■□ 3.25
TRPT1-201ENST00000317459 PBRM1Q86U86 1689 aa35.38■■■■□ 3.25
TRPT1-201ENST00000317459 CHMP7Q8WUX9 453 aaPredicted RBP35.3■■■■□ 3.24
TRPT1-201ENST00000317459 SYNJ2O15056 1496 aa35.26■■■■□ 3.23
TRPT1-201ENST00000317459 ERICH3Q5RHP9 1530 aa35.15■■■■□ 3.22
TRPT1-201ENST00000317459 ADAMTS12P58397 1594 aa35.11■■■■□ 3.21
TRPT1-201ENST00000317459 FHAD1B1AJZ9 1412 aa35.06■■■■□ 3.2
TRPT1-201ENST00000317459 KIF27Q86VH2 1401 aa35.06■■■■□ 3.2
TRPT1-201ENST00000317459 GRIN2AQ12879 1464 aa35.02■■■■□ 3.2
TRPT1-201ENST00000317459 RIMBP3CA6NJZ7 1639 aa35■■■■□ 3.19
TRPT1-201ENST00000317459 RIMBP3BA6NNM3 1639 aa35■■■■□ 3.19
TRPT1-201ENST00000317459 RIMBP3Q9UFD9 1639 aa35■■■■□ 3.19
TRPT1-201ENST00000317459 ARHGEF11O15085 1522 aa35■■■■□ 3.19
TRPT1-201ENST00000317459 CLASP1Q7Z460 1538 aa35■■■■□ 3.19
TRPT1-201ENST00000317459 TRIM41Q8WV44 630 aa34.95■■■■□ 3.19
TRPT1-201ENST00000317459 IGF1RP08069 1367 aa34.9■■■■□ 3.18
TRPT1-201ENST00000317459 NUP160Q12769 1436 aa34.86■■■■□ 3.17
TRPT1-201ENST00000317459 CEP170Q5SW79 1584 aa34.83■■■■□ 3.17
TRPT1-201ENST00000317459 CUL7Q14999 1698 aa34.81■■■■□ 3.16
TRPT1-201ENST00000317459 CYB5RLQ6IPT4 315 aa34.72■■■■□ 3.15
TRPT1-201ENST00000317459 CARMIL1Q5VZK9 1371 aa34.72■■■■□ 3.15
TRPT1-201ENST00000317459 ARAP1Q96P48 1450 aa34.71■■■■□ 3.15
TRPT1-201ENST00000317459 RUSC2Q8N2Y8 1516 aa34.68■■■■□ 3.14
TRPT1-201ENST00000317459 SHROOM2Q13796 1616 aa34.58■■■■□ 3.13
TRPT1-201ENST00000317459 JPH4Q96JJ6 628 aa34.53■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms