RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 NISCHQ9Y2I1 1504 aa48.98■■■■■ 5.43
SFXN1-203ENST00000502393 CCDC180Q9P1Z9 1646 aa43.81■■■■■ 4.6
SFXN1-203ENST00000502393 ABCC9O60706 1549 aa43.5■■■■■ 4.55
SFXN1-203ENST00000502393 RB1CC1Q8TDY2 1594 aa41.58■■■■■ 4.25
SFXN1-203ENST00000502393 NACADO15069 1562 aa41.38■■■■■ 4.22
SFXN1-203ENST00000502393 DCAF8L2P0C7V8 631 aa41.21■■■■■ 4.19
SFXN1-203ENST00000502393 MYO15BQ96JP2 1530 aa40.93■■■■■ 4.14
SFXN1-203ENST00000502393 ZCCHC6Q5VYS8 1495 aaKnown RBP40.64■■■■■ 4.1
SFXN1-203ENST00000502393 UNC13AQ9UPW8 1703 aa40.56■■■■■ 4.08
SFXN1-203ENST00000502393 PABPN1Q86U42 306 aaKnown RBP eCLIP40.56■■■■■ 4.08
SFXN1-203ENST00000502393 DNAJC5BQ9UF47 199 aa40.55■■■■■ 4.08
SFXN1-203ENST00000502393 DCAF1Q9Y4B6 1507 aa40.51■■■■■ 4.08
SFXN1-203ENST00000502393 BICRAQ9NZM4 1560 aa40.32■■■■■ 4.05
SFXN1-203ENST00000502393 SCRIBQ14160 1630 aa39.9■■■■□ 3.98
SFXN1-203ENST00000502393 SHROOM4Q9ULL8 1493 aa39.88■■■■□ 3.98
SFXN1-203ENST00000502393 EIF4G1Q04637 1599 aaKnown RBP39.33■■■■□ 3.89
SFXN1-203ENST00000502393 CC2D2AQ9P2K1 1620 aa39.32■■■■□ 3.89
SFXN1-203ENST00000502393 CECR2Q9BXF3 1484 aa39.18■■■■□ 3.86
SFXN1-203ENST00000502393 NCAPD3P42695 1498 aa38.21■■■■□ 3.71
SFXN1-203ENST00000502393 SMARCA4P51532 1647 aa38.12■■■■□ 3.69
SFXN1-203ENST00000502393 ATAD2BQ9ULI0 1458 aa38.11■■■■□ 3.69
SFXN1-203ENST00000502393 SMARCA2P51531 1590 aa38.03■■■■□ 3.68
SFXN1-203ENST00000502393 BAZ1AQ9NRL2 1556 aaPredicted RBP38.01■■■■□ 3.67
SFXN1-203ENST00000502393 HMGXB3Q12766 1538 aa37.93■■■■□ 3.66
SFXN1-203ENST00000502393 PEG3Q9GZU2 1588 aa37.79■■■■□ 3.64
SFXN1-203ENST00000502393 BAZ1BQ9UIG0 1483 aaKnown RBP37.76■■■■□ 3.63
SFXN1-203ENST00000502393 MROH2BQ7Z745 1585 aa37.72■■■■□ 3.63
SFXN1-203ENST00000502393 ERCC6Q03468 1493 aa37.57■■■■□ 3.6
SFXN1-203ENST00000502393 NESP48681 1621 aa37.44■■■■□ 3.58
SFXN1-203ENST00000502393 CUX2O14529 1486 aa37.43■■■■□ 3.58
SFXN1-203ENST00000502393 LAMC3Q9Y6N6 1575 aa37.29■■■■□ 3.56
SFXN1-203ENST00000502393 WIZO95785 1651 aa37.26■■■■□ 3.56
SFXN1-203ENST00000502393 PDS5BQ9NTI5 1447 aa37.09■■■■□ 3.53
SFXN1-203ENST00000502393 DNAJC5Q9H3Z4 198 aa37.08■■■■□ 3.53
SFXN1-203ENST00000502393 RSF1Q96T23 1441 aaPredicted RBP37.07■■■■□ 3.52
SFXN1-203ENST00000502393 CADPSQ9ULU8 1353 aa37.05■■■■□ 3.52
SFXN1-203ENST00000502393 THOC2Q8NI27 1593 aaKnown RBP37.01■■■■□ 3.52
SFXN1-203ENST00000502393 KIF21AQ7Z4S6 1674 aa36.96■■■■□ 3.51
SFXN1-203ENST00000502393 TOP2AP11388 1531 aaKnown RBP36.85■■■■□ 3.49
SFXN1-203ENST00000502393 MRC2Q9UBG0 1479 aa36.71■■■■□ 3.47
SFXN1-203ENST00000502393 CFTRP13569 1480 aa36.69■■■■□ 3.46
SFXN1-203ENST00000502393 CEP164Q9UPV0 1460 aa36.62■■■■□ 3.45
SFXN1-203ENST00000502393 WDR62O43379 1518 aa36.61■■■■□ 3.45
SFXN1-203ENST00000502393 FANCD2Q9BXW9 1451 aa36.61■■■■□ 3.45
SFXN1-203ENST00000502393 CCDC88BA6NC98 1476 aa36.43■■■■□ 3.42
SFXN1-203ENST00000502393 PRDM2Q13029 1718 aa36.29■■■■□ 3.4
SFXN1-203ENST00000502393 URB2Q14146 1524 aaKnown RBP36.28■■■■□ 3.4
SFXN1-203ENST00000502393 ABCC8Q09428 1581 aa35.94■■■■□ 3.34
SFXN1-203ENST00000502393 TOPBP1Q92547 1522 aa35.94■■■■□ 3.34
SFXN1-203ENST00000502393 IFT140Q96RY7 1462 aa35.9■■■■□ 3.34
SFXN1-203ENST00000502393 DNMBPQ6XZF7 1577 aa35.84■■■■□ 3.33
SFXN1-203ENST00000502393 OSCARQ8IYS5 282 aa35.79■■■■□ 3.32
SFXN1-203ENST00000502393 ZNF608Q9ULD9 1512 aaPredicted RBP35.77■■■■□ 3.32
SFXN1-203ENST00000502393 SUPT5HO00267 1087 aaKnown RBP35.62■■■■□ 3.29
SFXN1-203ENST00000502393 TARBP1Q13395 1621 aaKnown RBP35.6■■■■□ 3.29
SFXN1-203ENST00000502393 POLA1P09884 1462 aaPredicted RBP35.6■■■■□ 3.29
SFXN1-203ENST00000502393 EIF4G3O43432 1585 aaKnown RBP35.59■■■■□ 3.29
SFXN1-203ENST00000502393 TRIM41Q8WV44 630 aa35.53■■■■□ 3.28
SFXN1-203ENST00000502393 AQRO60306 1485 aaKnown RBP eCLIP35.5■■■■□ 3.279e-7■■■■□ 23.8
SFXN1-203ENST00000502393 SOGA1O94964 1423 aa35.46■■■■□ 3.27
SFXN1-203ENST00000502393 RAD54L2Q9Y4B4 1467 aa35.44■■■■□ 3.26
SFXN1-203ENST00000502393 CUX1P39880 1505 aa35.42■■■■□ 3.26
SFXN1-203ENST00000502393 FGD5Q6ZNL6 1462 aa35.41■■■■□ 3.26
SFXN1-203ENST00000502393 TDRD9Q8NDG6 1382 aaKnown RBP35.33■■■■□ 3.25
SFXN1-203ENST00000502393 WDR97A6NE52 1622 aa35.3■■■■□ 3.24
SFXN1-203ENST00000502393 CHD1O14646 1710 aa35.24■■■■□ 3.23
SFXN1-203ENST00000502393 RIMBP3CA6NJZ7 1639 aa35.22■■■■□ 3.23
SFXN1-203ENST00000502393 RIMBP3BA6NNM3 1639 aa35.22■■■■□ 3.23
SFXN1-203ENST00000502393 RIMBP3Q9UFD9 1639 aa35.22■■■■□ 3.23
SFXN1-203ENST00000502393 FBLN2P98095 1184 aa35.22■■■■□ 3.23
SFXN1-203ENST00000502393 ARHGEF11O15085 1522 aa35.16■■■■□ 3.22
SFXN1-203ENST00000502393 SNAPC4Q5SXM2 1469 aa35.14■■■■□ 3.22
SFXN1-203ENST00000502393 GRIN2BQ13224 1484 aa35.12■■■■□ 3.21
SFXN1-203ENST00000502393 MAGI1Q96QZ7 1491 aaPredicted RBP35.09■■■■□ 3.21
SFXN1-203ENST00000502393 ABCA10Q8WWZ4 1543 aa35.05■■■■□ 3.2
SFXN1-203ENST00000502393 CHMP7Q8WUX9 453 aaPredicted RBP35.04■■■■□ 3.2
SFXN1-203ENST00000502393 GAPVD1Q14C86 1478 aa35.03■■■■□ 3.2
SFXN1-203ENST00000502393 WRNQ14191 1432 aaPredicted RBP eCLIP34.98■■■■□ 3.19
SFXN1-203ENST00000502393 SYNJ2O15056 1496 aa34.97■■■■□ 3.19
SFXN1-203ENST00000502393 TOP2BQ02880 1626 aa34.95■■■■□ 3.18
SFXN1-203ENST00000502393 PBRM1Q86U86 1689 aa34.95■■■■□ 3.18
SFXN1-203ENST00000502393 ABCA5Q8WWZ7 1642 aa34.94■■■■□ 3.18
SFXN1-203ENST00000502393 BIVM-ERCC5R4GMW8 1640 aa34.93■■■■□ 3.18
SFXN1-203ENST00000502393 SYNJ1O43426 1573 aa34.91■■■■□ 3.18
SFXN1-203ENST00000502393 CYB5RLQ6IPT4 315 aa34.9■■■■□ 3.18
SFXN1-203ENST00000502393 CLASP1Q7Z460 1538 aa34.88■■■■□ 3.17
SFXN1-203ENST00000502393 ARAP1Q96P48 1450 aa34.83■■■■□ 3.17
SFXN1-203ENST00000502393 GRIN2AQ12879 1464 aa34.65■■■■□ 3.14
SFXN1-203ENST00000502393 ADAMTS12P58397 1594 aa34.65■■■■□ 3.14
SFXN1-203ENST00000502393 ERICH3Q5RHP9 1530 aa34.62■■■■□ 3.13
SFXN1-203ENST00000502393 FHAD1B1AJZ9 1412 aa34.61■■■■□ 3.13
SFXN1-203ENST00000502393 NUP160Q12769 1436 aa34.54■■■■□ 3.12
SFXN1-203ENST00000502393 CEP170Q5SW79 1584 aa34.49■■■■□ 3.11
SFXN1-203ENST00000502393 TRHP20396 242 aaPredicted RBP34.42■■■■□ 3.1
SFXN1-203ENST00000502393 SHROOM2Q13796 1616 aa34.33■■■■□ 3.09
SFXN1-203ENST00000502393 ERCC6L2Q5T890 1561 aa34.32■■■■□ 3.09
SFXN1-203ENST00000502393 KIF27Q86VH2 1401 aa34.3■■■■□ 3.08
SFXN1-203ENST00000502393 IGF1RP08069 1367 aa34.25■■■■□ 3.07
SFXN1-203ENST00000502393 JPH4Q96JJ6 628 aa34.21■■■■□ 3.07
SFXN1-203ENST00000502393 PRG4Q92954 1404 aaPredicted RBP34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms