RNA–Protein interactions for RNA: ENST00000513771.1

LINC01962-201, Transcript of long intergenic non-protein coding RNA 1962, humanhuman

TSL 2 BASIC

Gene LINC01962, Length 411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01962-201ENST00000513771 NISCHQ9Y2I1 1504 aa49.71■■■■■ 5.55
LINC01962-201ENST00000513771 CCDC180Q9P1Z9 1646 aa44.25■■■■■ 4.67
LINC01962-201ENST00000513771 ABCC9O60706 1549 aa43.57■■■■■ 4.56
LINC01962-201ENST00000513771 RB1CC1Q8TDY2 1594 aa41.76■■■■■ 4.28
LINC01962-201ENST00000513771 DCAF8L2P0C7V8 631 aa41.71■■■■■ 4.27
LINC01962-201ENST00000513771 NACADO15069 1562 aa41.65■■■■■ 4.26
LINC01962-201ENST00000513771 ZCCHC6Q5VYS8 1495 aaKnown RBP41.38■■■■■ 4.21
LINC01962-201ENST00000513771 MYO15BQ96JP2 1530 aa41.3■■■■■ 4.2
LINC01962-201ENST00000513771 DCAF1Q9Y4B6 1507 aa41.08■■■■■ 4.17
LINC01962-201ENST00000513771 UNC13AQ9UPW8 1703 aa40.81■■■■■ 4.12
LINC01962-201ENST00000513771 PABPN1Q86U42 306 aaKnown RBP eCLIP40.7■■■■■ 4.11
LINC01962-201ENST00000513771 BICRAQ9NZM4 1560 aa40.52■■■■■ 4.08
LINC01962-201ENST00000513771 SCRIBQ14160 1630 aa40.45■■■■■ 4.07
LINC01962-201ENST00000513771 DNAJC5BQ9UF47 199 aa40.14■■■■■ 4.02
LINC01962-201ENST00000513771 SHROOM4Q9ULL8 1493 aa40■■■■□ 3.99
LINC01962-201ENST00000513771 EIF4G1Q04637 1599 aaKnown RBP39.47■■■■□ 3.91
LINC01962-201ENST00000513771 CC2D2AQ9P2K1 1620 aa39.36■■■■□ 3.89
LINC01962-201ENST00000513771 CECR2Q9BXF3 1484 aa39.14■■■■□ 3.86
LINC01962-201ENST00000513771 SMARCA4P51532 1647 aa38.63■■■■□ 3.77
LINC01962-201ENST00000513771 BAZ1AQ9NRL2 1556 aaPredicted RBP38.54■■■■□ 3.76
LINC01962-201ENST00000513771 ATAD2BQ9ULI0 1458 aa38.47■■■■□ 3.75
LINC01962-201ENST00000513771 NCAPD3P42695 1498 aa38.44■■■■□ 3.74
LINC01962-201ENST00000513771 SMARCA2P51531 1590 aa38.39■■■■□ 3.74
LINC01962-201ENST00000513771 MROH2BQ7Z745 1585 aa38.35■■■■□ 3.73
LINC01962-201ENST00000513771 HMGXB3Q12766 1538 aa38.23■■■■□ 3.71
LINC01962-201ENST00000513771 PEG3Q9GZU2 1588 aa38.2■■■■□ 3.71
LINC01962-201ENST00000513771 BAZ1BQ9UIG0 1483 aaKnown RBP38.15■■■■□ 3.7
LINC01962-201ENST00000513771 WIZO95785 1651 aa37.92■■■■□ 3.66
LINC01962-201ENST00000513771 RSF1Q96T23 1441 aaPredicted RBP37.83■■■■□ 3.65
LINC01962-201ENST00000513771 NESP48681 1621 aa37.65■■■■□ 3.62
LINC01962-201ENST00000513771 ERCC6Q03468 1493 aa37.56■■■■□ 3.6
LINC01962-201ENST00000513771 TOP2AP11388 1531 aaKnown RBP37.49■■■■□ 3.59
LINC01962-201ENST00000513771 LAMC3Q9Y6N6 1575 aa37.46■■■■□ 3.59
LINC01962-201ENST00000513771 CADPSQ9ULU8 1353 aa37.33■■■■□ 3.57
LINC01962-201ENST00000513771 PDS5BQ9NTI5 1447 aa37.23■■■■□ 3.55
LINC01962-201ENST00000513771 CUX2O14529 1486 aa37.17■■■■□ 3.54
LINC01962-201ENST00000513771 KIF21AQ7Z4S6 1674 aa37.17■■■■□ 3.54
LINC01962-201ENST00000513771 THOC2Q8NI27 1593 aaKnown RBP37.08■■■■□ 3.53
LINC01962-201ENST00000513771 CFTRP13569 1480 aa37.07■■■■□ 3.52
LINC01962-201ENST00000513771 CCDC88BA6NC98 1476 aa37.06■■■■□ 3.52
LINC01962-201ENST00000513771 FANCD2Q9BXW9 1451 aa36.93■■■■□ 3.5
LINC01962-201ENST00000513771 CEP164Q9UPV0 1460 aa36.9■■■■□ 3.5
LINC01962-201ENST00000513771 MRC2Q9UBG0 1479 aa36.88■■■■□ 3.49
LINC01962-201ENST00000513771 SUPT5HO00267 1087 aaKnown RBP36.8■■■■□ 3.48
LINC01962-201ENST00000513771 WDR62O43379 1518 aa36.75■■■■□ 3.47
LINC01962-201ENST00000513771 PRDM2Q13029 1718 aa36.74■■■■□ 3.47
LINC01962-201ENST00000513771 URB2Q14146 1524 aaKnown RBP36.57■■■■□ 3.44
LINC01962-201ENST00000513771 TOPBP1Q92547 1522 aa36.31■■■■□ 3.4
LINC01962-201ENST00000513771 ABCC8Q09428 1581 aa36.25■■■■□ 3.39
LINC01962-201ENST00000513771 DNAJC5Q9H3Z4 198 aa36.25■■■■□ 3.39
LINC01962-201ENST00000513771 DNMBPQ6XZF7 1577 aa36.24■■■■□ 3.39
LINC01962-201ENST00000513771 IFT140Q96RY7 1462 aa36.11■■■■□ 3.37
LINC01962-201ENST00000513771 ZNF608Q9ULD9 1512 aaPredicted RBP36■■■■□ 3.35
LINC01962-201ENST00000513771 POLA1P09884 1462 aaPredicted RBP35.99■■■■□ 3.35
LINC01962-201ENST00000513771 CUX1P39880 1505 aa35.98■■■■□ 3.35
LINC01962-201ENST00000513771 TARBP1Q13395 1621 aaKnown RBP35.92■■■■□ 3.34
LINC01962-201ENST00000513771 FGD5Q6ZNL6 1462 aa35.89■■■■□ 3.34
LINC01962-201ENST00000513771 RAD54L2Q9Y4B4 1467 aa35.86■■■■□ 3.33
LINC01962-201ENST00000513771 SOGA1O94964 1423 aa35.84■■■■□ 3.33
LINC01962-201ENST00000513771 EIF4G3O43432 1585 aaKnown RBP35.84■■■■□ 3.33
LINC01962-201ENST00000513771 AQRO60306 1485 aaKnown RBP eCLIP35.78■■■■□ 3.32
LINC01962-201ENST00000513771 TDRD9Q8NDG6 1382 aaKnown RBP35.69■■■■□ 3.3
LINC01962-201ENST00000513771 WRNQ14191 1432 aaPredicted RBP eCLIP35.67■■■■□ 3.38e-7■■■□□ 18
LINC01962-201ENST00000513771 OSCARQ8IYS5 282 aa35.62■■■■□ 3.29
LINC01962-201ENST00000513771 SYNJ1O43426 1573 aa35.61■■■■□ 3.29
LINC01962-201ENST00000513771 TOP2BQ02880 1626 aa35.6■■■■□ 3.29
LINC01962-201ENST00000513771 BIVM-ERCC5R4GMW8 1640 aa35.59■■■■□ 3.29
LINC01962-201ENST00000513771 WDR97A6NE52 1622 aa35.57■■■■□ 3.28
LINC01962-201ENST00000513771 ABCA10Q8WWZ4 1543 aa35.5■■■■□ 3.27
LINC01962-201ENST00000513771 GRIN2BQ13224 1484 aa35.44■■■■□ 3.26
LINC01962-201ENST00000513771 SNAPC4Q5SXM2 1469 aa35.44■■■■□ 3.26
LINC01962-201ENST00000513771 GAPVD1Q14C86 1478 aa35.42■■■■□ 3.26
LINC01962-201ENST00000513771 FBLN2P98095 1184 aa35.42■■■■□ 3.26
LINC01962-201ENST00000513771 CHD1O14646 1710 aa35.42■■■■□ 3.26
LINC01962-201ENST00000513771 ABCA5Q8WWZ7 1642 aa35.39■■■■□ 3.26
LINC01962-201ENST00000513771 PBRM1Q86U86 1689 aa35.36■■■■□ 3.25
LINC01962-201ENST00000513771 MAGI1Q96QZ7 1491 aaPredicted RBP35.35■■■■□ 3.25
LINC01962-201ENST00000513771 CHMP7Q8WUX9 453 aaPredicted RBP35.25■■■■□ 3.23
LINC01962-201ENST00000513771 SYNJ2O15056 1496 aa35.22■■■■□ 3.23
LINC01962-201ENST00000513771 RIMBP3CA6NJZ7 1639 aa35.08■■■■□ 3.21
LINC01962-201ENST00000513771 RIMBP3BA6NNM3 1639 aa35.08■■■■□ 3.21
LINC01962-201ENST00000513771 RIMBP3Q9UFD9 1639 aa35.08■■■■□ 3.21
LINC01962-201ENST00000513771 TRIM41Q8WV44 630 aa35.08■■■■□ 3.21
LINC01962-201ENST00000513771 ADAMTS12P58397 1594 aa35.08■■■■□ 3.21
LINC01962-201ENST00000513771 ERICH3Q5RHP9 1530 aa35.06■■■■□ 3.2
LINC01962-201ENST00000513771 ARHGEF11O15085 1522 aa35.06■■■■□ 3.2
LINC01962-201ENST00000513771 CLASP1Q7Z460 1538 aa35.02■■■■□ 3.2
LINC01962-201ENST00000513771 FHAD1B1AJZ9 1412 aa34.99■■■■□ 3.19
LINC01962-201ENST00000513771 GRIN2AQ12879 1464 aa34.99■■■■□ 3.19
LINC01962-201ENST00000513771 KIF27Q86VH2 1401 aa34.94■■■■□ 3.18
LINC01962-201ENST00000513771 CEP170Q5SW79 1584 aa34.83■■■■□ 3.17
LINC01962-201ENST00000513771 NUP160Q12769 1436 aa34.82■■■■□ 3.17
LINC01962-201ENST00000513771 IGF1RP08069 1367 aa34.81■■■■□ 3.16
LINC01962-201ENST00000513771 ARAP1Q96P48 1450 aa34.78■■■■□ 3.16
LINC01962-201ENST00000513771 CYB5RLQ6IPT4 315 aa34.77■■■■□ 3.16
LINC01962-201ENST00000513771 CUL7Q14999 1698 aa34.72■■■■□ 3.15
LINC01962-201ENST00000513771 CARMIL1Q5VZK9 1371 aa34.62■■■■□ 3.13
LINC01962-201ENST00000513771 RUSC2Q8N2Y8 1516 aa34.6■■■■□ 3.13
LINC01962-201ENST00000513771 SHROOM2Q13796 1616 aa34.57■■■■□ 3.12
LINC01962-201ENST00000513771 ERCC6L2Q5T890 1561 aa34.57■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms