Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS25Q9BRG1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
VPS25Q9BRG1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS25Q9BRG1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS25Q9BRG1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS25Q9BRG1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS25Q9BRG1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS25Q9BRG1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS25Q9BRG1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS25Q9BRG1 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC14.98□□□□□ -0.01
VPS25Q9BRG1 AC006077.2-201ENST00000623591 457 ntBASIC14.98□□□□□ -0.01
VPS25Q9BRG1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS25Q9BRG1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS25Q9BRG1 AC018358.1-201ENST00000631079 1402 ntBASIC14.98□□□□□ -0.01
VPS25Q9BRG1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS25Q9BRG1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
VPS25Q9BRG1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS25Q9BRG1 AL139384.1-201ENST00000612143 3047 ntBASIC14.98□□□□□ -0.01
VPS25Q9BRG1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS25Q9BRG1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
VPS25Q9BRG1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS25Q9BRG1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS25Q9BRG1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
VPS25Q9BRG1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS25Q9BRG1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS25Q9BRG1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
VPS25Q9BRG1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS25Q9BRG1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS25Q9BRG1 BX323043.1-201ENST00000641006 1765 ntBASIC14.96□□□□□ -0.01
VPS25Q9BRG1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS25Q9BRG1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS25Q9BRG1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS25Q9BRG1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS25Q9BRG1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS25Q9BRG1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS25Q9BRG1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS25Q9BRG1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS25Q9BRG1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.96□□□□□ -0.02
VPS25Q9BRG1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS25Q9BRG1 AC080038.3-201ENST00000623346 1952 ntBASIC14.94□□□□□ -0.02
VPS25Q9BRG1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms