RNA–Protein interactions for RNA: ENST00000264639.8

PSMD3-201, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD3, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-201ENST00000264639 NISCHQ9Y2I1 1504 aa40.91■■■■■ 4.14
PSMD3-201ENST00000264639 CCDC180Q9P1Z9 1646 aa35.29■■■■□ 3.24
PSMD3-201ENST00000264639 ZCCHC6Q5VYS8 1495 aaKnown RBP34.48■■■■□ 3.11
PSMD3-201ENST00000264639 SHROOM4Q9ULL8 1493 aa33.99■■■■□ 3.03
PSMD3-201ENST00000264639 DCAF8L2P0C7V8 631 aa33.8■■■■□ 3
PSMD3-201ENST00000264639 DCAF1Q9Y4B6 1507 aa33.73■■■□□ 2.99
PSMD3-201ENST00000264639 ABCC9O60706 1549 aa33.5■■■□□ 2.95
PSMD3-201ENST00000264639 MYO15BQ96JP2 1530 aa33.09■■■□□ 2.89
PSMD3-201ENST00000264639 SUPT5HO00267 1087 aaKnown RBP33■■■□□ 2.87
PSMD3-201ENST00000264639 NACADO15069 1562 aa32.77■■■□□ 2.84
PSMD3-201ENST00000264639 SCRIBQ14160 1630 aa32.7■■■□□ 2.83
PSMD3-201ENST00000264639 RB1CC1Q8TDY2 1594 aa32.36■■■□□ 2.77
PSMD3-201ENST00000264639 RSF1Q96T23 1441 aaPredicted RBP32.01■■■□□ 2.71
PSMD3-201ENST00000264639 CHIC1Q5VXU3 224 aa31.82■■■□□ 2.68
PSMD3-201ENST00000264639 CECR2Q9BXF3 1484 aa31.82■■■□□ 2.68
PSMD3-201ENST00000264639 UNC13AQ9UPW8 1703 aa31.78■■■□□ 2.68
PSMD3-201ENST00000264639 MROH2BQ7Z745 1585 aa31.68■■■□□ 2.66
PSMD3-201ENST00000264639 BAZ1AQ9NRL2 1556 aaPredicted RBP31.53■■■□□ 2.64
PSMD3-201ENST00000264639 WIZO95785 1651 aa31.46■■■□□ 2.63
PSMD3-201ENST00000264639 BICRAQ9NZM4 1560 aa31.42■■■□□ 2.62
PSMD3-201ENST00000264639 PABPN1Q86U42 306 aaKnown RBP eCLIP31.34■■■□□ 2.615e-8■■□□□ 11.9
PSMD3-201ENST00000264639 SMARCA4P51532 1647 aa31.32■■■□□ 2.6
PSMD3-201ENST00000264639 HRCP23327 699 aa31.09■■■□□ 2.57
PSMD3-201ENST00000264639 TOP2AP11388 1531 aaKnown RBP31.08■■■□□ 2.57
PSMD3-201ENST00000264639 TRIM41Q8WV44 630 aa30.92■■■□□ 2.54
PSMD3-201ENST00000264639 PEG3Q9GZU2 1588 aa30.86■■■□□ 2.53
PSMD3-201ENST00000264639 SMARCA2P51531 1590 aa30.84■■■□□ 2.53
PSMD3-201ENST00000264639 CCDC88BA6NC98 1476 aa30.83■■■□□ 2.53
PSMD3-201ENST00000264639 EIF4G1Q04637 1599 aaKnown RBP30.8■■■□□ 2.52
PSMD3-201ENST00000264639 LOC105371045A0A1W2PR82 267 aa30.71■■■□□ 2.51
PSMD3-201ENST00000264639 ATAD2BQ9ULI0 1458 aa30.68■■■□□ 2.5
PSMD3-201ENST00000264639 DNAJC5BQ9UF47 199 aa30.59■■■□□ 2.49
PSMD3-201ENST00000264639 BAZ1BQ9UIG0 1483 aaKnown RBP30.55■■■□□ 2.48
PSMD3-201ENST00000264639 FAM9AQ8IZU1 332 aaPredicted RBP30.46■■■□□ 2.47
PSMD3-201ENST00000264639 PCGF6Q9BYE7 350 aa30.45■■■□□ 2.46
PSMD3-201ENST00000264639 ABCC8Q09428 1581 aa30.43■■■□□ 2.46
PSMD3-201ENST00000264639 CC2D2AQ9P2K1 1620 aa30.31■■■□□ 2.44
PSMD3-201ENST00000264639 NCAPD3P42695 1498 aa30.27■■■□□ 2.44
PSMD3-201ENST00000264639 HMGXB3Q12766 1538 aa30.26■■■□□ 2.43
PSMD3-201ENST00000264639 PPARGC1BQ86YN6 1023 aaKnown RBP30.2■■■□□ 2.42
PSMD3-201ENST00000264639 WRNQ14191 1432 aaPredicted RBP eCLIP30.12■■■□□ 2.41
PSMD3-201ENST00000264639 EHMT2Q96KQ7 1210 aa30.08■■■□□ 2.41
PSMD3-201ENST00000264639 SOGA1O94964 1423 aa29.99■■■□□ 2.39
PSMD3-201ENST00000264639 SYNJ1O43426 1573 aa29.97■■■□□ 2.39
PSMD3-201ENST00000264639 EEA1Q15075 1411 aa29.92■■■□□ 2.38
PSMD3-201ENST00000264639 RUSC2Q8N2Y8 1516 aa29.84■■■□□ 2.37
PSMD3-201ENST00000264639 TRIM26Q12899 539 aaPredicted RBP29.81■■■□□ 2.36
PSMD3-201ENST00000264639 CFTRP13569 1480 aa29.8■■■□□ 2.36
PSMD3-201ENST00000264639 CSRNP3Q8WYN3 585 aa29.79■■■□□ 2.36
PSMD3-201ENST00000264639 TOP2BQ02880 1626 aa29.75■■■□□ 2.35
PSMD3-201ENST00000264639 BIVM-ERCC5R4GMW8 1640 aa29.69■■■□□ 2.34
PSMD3-201ENST00000264639 TNIKQ9UKE5 1360 aa29.61■■■□□ 2.33
PSMD3-201ENST00000264639 PRDM2Q13029 1718 aa29.6■■■□□ 2.33
PSMD3-201ENST00000264639 GOLGA3Q08378 1498 aa29.6■■■□□ 2.33
PSMD3-201ENST00000264639 CADPSQ9ULU8 1353 aa29.58■■■□□ 2.33
PSMD3-201ENST00000264639 CUX1P39880 1505 aa29.57■■■□□ 2.32
PSMD3-201ENST00000264639 CEP162Q5TB80 1403 aa29.55■■■□□ 2.32
PSMD3-201ENST00000264639 UBTFP17480 764 aaKnown RBP29.53■■■□□ 2.32
PSMD3-201ENST00000264639 ZEB1P37275 1124 aaPredicted RBP29.53■■■□□ 2.32
PSMD3-201ENST00000264639 CEP164Q9UPV0 1460 aa29.53■■■□□ 2.32
PSMD3-201ENST00000264639 KIF21BO75037 1637 aa29.52■■■□□ 2.32
PSMD3-201ENST00000264639 PELP1Q8IZL8 1130 aaKnown RBP29.47■■■□□ 2.31
PSMD3-201ENST00000264639 RAPGEF2Q9Y4G8 1499 aa29.33■■■□□ 2.29
PSMD3-201ENST00000264639 KIF27Q86VH2 1401 aa29.29■■■□□ 2.28
PSMD3-201ENST00000264639 FANCD2Q9BXW9 1451 aa29.27■■■□□ 2.28
PSMD3-201ENST00000264639 PRXQ9BXM0 1461 aa29.23■■■□□ 2.27
PSMD3-201ENST00000264639 ERICH3Q5RHP9 1530 aa29.21■■■□□ 2.27
PSMD3-201ENST00000264639 NESP48681 1621 aa29.2■■■□□ 2.26
PSMD3-201ENST00000264639 CLIP1P30622 1438 aa29.18■■■□□ 2.26
PSMD3-201ENST00000264639 FGD5Q6ZNL6 1462 aa29.16■■■□□ 2.26
PSMD3-201ENST00000264639 LAMC3Q9Y6N6 1575 aa29.13■■■□□ 2.25
PSMD3-201ENST00000264639 CUX2O14529 1486 aa29.1■■■□□ 2.25
PSMD3-201ENST00000264639 DNMBPQ6XZF7 1577 aa29.07■■■□□ 2.24
PSMD3-201ENST00000264639 SCAF1Q9H7N4 1312 aaKnown RBP29.07■■■□□ 2.24
PSMD3-201ENST00000264639 TOPBP1Q92547 1522 aa29.01■■■□□ 2.23
PSMD3-201ENST00000264639 VPS8Q8N3P4 1428 aa28.99■■■□□ 2.23
PSMD3-201ENST00000264639 IGF1RP08069 1367 aa28.98■■■□□ 2.23
PSMD3-201ENST00000264639 RANGAP1P46060 587 aaPredicted RBP28.97■■■□□ 2.23
PSMD3-201ENST00000264639 TTBK1Q5TCY1 1321 aaPredicted RBP28.95■■■□□ 2.22
PSMD3-201ENST00000264639 POLA1P09884 1462 aaPredicted RBP28.94■■■□□ 2.22
PSMD3-201ENST00000264639 PDS5BQ9NTI5 1447 aa28.93■■■□□ 2.22
PSMD3-201ENST00000264639 RAD54L2Q9Y4B4 1467 aa28.88■■■□□ 2.21
PSMD3-201ENST00000264639 ABCA10Q8WWZ4 1543 aa28.88■■■□□ 2.21
PSMD3-201ENST00000264639 URB2Q14146 1524 aaKnown RBP28.87■■■□□ 2.21
PSMD3-201ENST00000264639 ERCC6Q03468 1493 aa28.86■■■□□ 2.21
PSMD3-201ENST00000264639 CARMIL1Q5VZK9 1371 aa28.85■■■□□ 2.21
PSMD3-201ENST00000264639 ARAP1Q96P48 1450 aa28.8■■■□□ 2.2
PSMD3-201ENST00000264639 KIF21AQ7Z4S6 1674 aa28.79■■■□□ 2.2
PSMD3-201ENST00000264639 APLP2Q06481 763 aa28.77■■■□□ 2.2
PSMD3-201ENST00000264639 WDR97A6NE52 1622 aa28.7■■■□□ 2.18
PSMD3-201ENST00000264639 ARHGAP35Q9NRY4 1499 aa28.69■■■□□ 2.18
PSMD3-201ENST00000264639 CUL7Q14999 1698 aa28.63■■■□□ 2.17
PSMD3-201ENST00000264639 ABCA5Q8WWZ7 1642 aa28.59■■■□□ 2.17
PSMD3-201ENST00000264639 ACIN1Q9UKV3 1341 aaKnown RBP28.57■■■□□ 2.16
PSMD3-201ENST00000264639 TDRD9Q8NDG6 1382 aaKnown RBP28.56■■■□□ 2.16
PSMD3-201ENST00000264639 THOC2Q8NI27 1593 aaKnown RBP28.56■■■□□ 2.16
PSMD3-201ENST00000264639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.55■■■□□ 2.16
PSMD3-201ENST00000264639 GAPVD1Q14C86 1478 aa28.53■■■□□ 2.16
PSMD3-201ENST00000264639 MRC2Q9UBG0 1479 aa28.51■■■□□ 2.16
PSMD3-201ENST00000264639 TARBP1Q13395 1621 aaKnown RBP28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms