RNA–Protein interactions for RNA: ENST00000409785.8

KCMF1-201, Transcript of potassium channel modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCMF1, Length 7,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1-201ENST00000409785 DCAF8L2P0C7V8 631 aa29.14■■■□□ 2.26
KCMF1-201ENST00000409785 EHMT2Q96KQ7 1210 aa27.49■■□□□ 1.99
KCMF1-201ENST00000409785 SUPT5HO00267 1087 aaKnown RBP26.9■■□□□ 1.9
KCMF1-201ENST00000409785 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
KCMF1-201ENST00000409785 TTBK1Q5TCY1 1321 aaPredicted RBP26.42■■□□□ 1.82
KCMF1-201ENST00000409785 PELP1Q8IZL8 1130 aaKnown RBP26.13■■□□□ 1.77
KCMF1-201ENST00000409785 RANGAP1P46060 587 aaPredicted RBP26.08■■□□□ 1.77
KCMF1-201ENST00000409785 APLP2Q06481 763 aa25.99■■□□□ 1.75
KCMF1-201ENST00000409785 ATP1B4Q9UN42 357 aaPredicted RBP25.88■■□□□ 1.73
KCMF1-201ENST00000409785 FAM9AQ8IZU1 332 aaPredicted RBP25.79■■□□□ 1.72
KCMF1-201ENST00000409785 ERICH6Q7L0X2 663 aa25.74■■□□□ 1.71
KCMF1-201ENST00000409785 PCGF6Q9BYE7 350 aa25.44■■□□□ 1.66
KCMF1-201ENST00000409785 CHIC1Q5VXU3 224 aa25.27■■□□□ 1.64
KCMF1-201ENST00000409785 MYT1Q01538 1121 aa25.24■■□□□ 1.63
KCMF1-201ENST00000409785 MYT1LQ9UL68 1186 aa25.17■■□□□ 1.62
KCMF1-201ENST00000409785 CCER1Q8TC90 406 aaPredicted RBP25.08■■□□□ 1.6
KCMF1-201ENST00000409785 YTHDC1Q96MU7 727 aaKnown RBP25.07■■□□□ 1.6
KCMF1-201ENST00000409785 CNGB1Q14028 1251 aaPredicted RBP25■■□□□ 1.59
KCMF1-201ENST00000409785 POLR3GLQ9BT43 218 aa24.96■■□□□ 1.59
KCMF1-201ENST00000409785 PPARGC1BQ86YN6 1023 aaKnown RBP24.87■■□□□ 1.57
KCMF1-201ENST00000409785 NISCHQ9Y2I1 1504 aa24.85■■□□□ 1.57
KCMF1-201ENST00000409785 SLC4A1APQ9BWU0 796 aaKnown RBP24.78■■□□□ 1.56
KCMF1-201ENST00000409785 UBTFP17480 764 aaKnown RBP24.77■■□□□ 1.56
KCMF1-201ENST00000409785 NEFLP07196 543 aa24.72■■□□□ 1.55
KCMF1-201ENST00000409785 CENPBP07199 599 aaPredicted RBP24.7■■□□□ 1.54
KCMF1-201ENST00000409785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.65■■□□□ 1.54
KCMF1-201ENST00000409785 HNRNPUL2Q1KMD3 747 aaKnown RBP24.65■■□□□ 1.54
KCMF1-201ENST00000409785 ITGAEP38570 1179 aa24.58■■□□□ 1.53
KCMF1-201ENST00000409785 DAXXQ9UER7 740 aaPredicted RBP24.55■■□□□ 1.52
KCMF1-201ENST00000409785 TRIM41Q8WV44 630 aa24.52■■□□□ 1.52
KCMF1-201ENST00000409785 BCL11AQ9H165 835 aa24.27■■□□□ 1.48
KCMF1-201ENST00000409785 SLC24A1O60721 1099 aa24.2■■□□□ 1.46
KCMF1-201ENST00000409785 CLSPNQ9HAW4 1339 aa24.07■■□□□ 1.44
KCMF1-201ENST00000409785 ZEB1P37275 1124 aaPredicted RBP24.04■■□□□ 1.44
KCMF1-201ENST00000409785 ZNF316A6NFI3 1004 aaPredicted RBP23.95■■□□□ 1.43
KCMF1-201ENST00000409785 PLPPR3Q6T4P5 718 aa23.84■■□□□ 1.41
KCMF1-201ENST00000409785 BCANQ96GW7 911 aa23.81■■□□□ 1.4
KCMF1-201ENST00000409785 FAM50AQ14320 339 aaKnown RBP23.59■■□□□ 1.37
KCMF1-201ENST00000409785 ZNF326Q5BKZ1 582 aaKnown RBP23.57■■□□□ 1.36
KCMF1-201ENST00000409785 TRIM52Q96A61 297 aa23.56■■□□□ 1.36
KCMF1-201ENST00000409785 NEUROD1Q13562 356 aa23.52■■□□□ 1.36
KCMF1-201ENST00000409785 RTL5Q5HYW3 569 aaPredicted RBP23.52■■□□□ 1.36
KCMF1-201ENST00000409785 ZBTB47Q9UFB7 747 aaPredicted RBP23.51■■□□□ 1.35
KCMF1-201ENST00000409785 FBLN2P98095 1184 aa23.49■■□□□ 1.35
KCMF1-201ENST00000409785 LOC105371045A0A1W2PR82 267 aa23.41■■□□□ 1.34
KCMF1-201ENST00000409785 ARID3CA6NKF2 412 aa23.33■■□□□ 1.33
KCMF1-201ENST00000409785 CANXP27824 592 aaKnown RBP23.33■■□□□ 1.33
KCMF1-201ENST00000409785 TRIM26Q12899 539 aaPredicted RBP23.31■■□□□ 1.32
KCMF1-201ENST00000409785 HRCP23327 699 aa23.23■■□□□ 1.31
KCMF1-201ENST00000409785 A0A0G2JS52 829 aa23.23■■□□□ 1.31
KCMF1-201ENST00000409785 PLEKHG5O94827 1062 aa23.21■■□□□ 1.31
KCMF1-201ENST00000409785 SCAF1Q9H7N4 1312 aaKnown RBP23.17■■□□□ 1.3
KCMF1-201ENST00000409785 SENP3Q9H4L4 574 aaPredicted RBP23.11■■□□□ 1.29
KCMF1-201ENST00000409785 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.29
KCMF1-201ENST00000409785 NEFMP07197 916 aa23.06■■□□□ 1.28
KCMF1-201ENST00000409785 NPM2Q86SE8 214 aaKnown RBP23.03■■□□□ 1.28
KCMF1-201ENST00000409785 DIEXFQ68CQ4 756 aaKnown RBP23.01■■□□□ 1.27
KCMF1-201ENST00000409785 CHGAP10645 457 aaKnown RBP22.97■■□□□ 1.27
KCMF1-201ENST00000409785 ESF1Q9H501 851 aaKnown RBP22.95■■□□□ 1.27
KCMF1-201ENST00000409785 P3H3Q8IVL6 736 aa22.95■■□□□ 1.26
KCMF1-201ENST00000409785 STAG3Q9UJ98 1225 aa22.94■■□□□ 1.26
KCMF1-201ENST00000409785 ZNF777Q9ULD5 760 aaPredicted RBP22.93■■□□□ 1.26
KCMF1-201ENST00000409785 TULP1O00294 542 aaPredicted RBP22.89■■□□□ 1.25
KCMF1-201ENST00000409785 ZBTB7CA1YPR0 619 aa22.88■■□□□ 1.25
KCMF1-201ENST00000409785 ANP32CO43423 234 aa22.87■■□□□ 1.25
KCMF1-201ENST00000409785 CDK11AQ9UQ88 783 aaPredicted RBP22.87■■□□□ 1.25
KCMF1-201ENST00000409785 ARXQ96QS3 562 aa22.84■■□□□ 1.25
KCMF1-201ENST00000409785 ABCC9O60706 1549 aa22.83■■□□□ 1.25
KCMF1-201ENST00000409785 SALL2Q9Y467 1007 aaPredicted RBP22.82■■□□□ 1.24
KCMF1-201ENST00000409785 HSP90AA1P07900 732 aaKnown RBP22.79■■□□□ 1.24
KCMF1-201ENST00000409785 EIF5BO60841 1220 aaKnown RBP22.68■■□□□ 1.22
KCMF1-201ENST00000409785 C14orf37Q86TY3 774 aa22.61■■□□□ 1.21
KCMF1-201ENST00000409785 GTF3C3Q9Y5Q9 886 aa22.6■■□□□ 1.21
KCMF1-201ENST00000409785 NCBP3Q53F19 620 aaKnown RBP22.58■■□□□ 1.21
KCMF1-201ENST00000409785 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.56■■□□□ 1.2
KCMF1-201ENST00000409785 ANP32BQ92688 251 aaKnown RBP22.55■■□□□ 1.2
KCMF1-201ENST00000409785 ANP32AP39687 249 aaKnown RBP22.53■■□□□ 1.2
KCMF1-201ENST00000409785 TPRNQ4KMQ1 711 aa22.52■■□□□ 1.2
KCMF1-201ENST00000409785 TAOK2Q9UL54 1235 aa22.52■■□□□ 1.2
KCMF1-201ENST00000409785 CDK11BP21127 795 aaKnown RBP22.5■■□□□ 1.19
KCMF1-201ENST00000409785 NBR1Q14596 966 aa22.39■■□□□ 1.18
KCMF1-201ENST00000409785 FAM9BQ8IZU0 186 aa22.39■■□□□ 1.18
KCMF1-201ENST00000409785 HAP1P54257 671 aaPredicted RBP22.37■■□□□ 1.17
KCMF1-201ENST00000409785 NPM1P06748 294 aaKnown RBP eCLIP22.33■■□□□ 1.17
KCMF1-201ENST00000409785 KDM2AQ9Y2K7 1162 aa22.32■■□□□ 1.16
KCMF1-201ENST00000409785 UPF2Q9HAU5 1272 aaKnown RBP22.3■■□□□ 1.16
KCMF1-201ENST00000409785 SENP3-EIF4A1A0A087X0R7 540 aa22.28■■□□□ 1.16
KCMF1-201ENST00000409785 NPHP1O15259 732 aa22.25■■□□□ 1.15
KCMF1-201ENST00000409785 FKBP8Q14318 412 aa22.23■■□□□ 1.15
KCMF1-201ENST00000409785 CHIC2Q9UKJ5 165 aa22.21■■□□□ 1.15
KCMF1-201ENST00000409785 ARID4BQ4LE39 1312 aaPredicted RBP22.16■■□□□ 1.14
KCMF1-201ENST00000409785 IRX6P78412 446 aaPredicted RBP22.15■■□□□ 1.14
KCMF1-201ENST00000409785 HNRNPUQ00839 825 aaKnown RBP eCLIP22.15■■□□□ 1.14
KCMF1-201ENST00000409785 LMOD2Q6P5Q4 547 aa22.12■■□□□ 1.13
KCMF1-201ENST00000409785 WDR43Q15061 677 aaKnown RBP eCLIP22.12■■□□□ 1.13
KCMF1-201ENST00000409785 PPM1GO15355 546 aaPredicted RBP22.1■■□□□ 1.13
KCMF1-201ENST00000409785 HIRIP3Q9BW71 556 aaPredicted RBP22.07■■□□□ 1.12
KCMF1-201ENST00000409785 TMC1Q8TDI8 760 aa22.07■■□□□ 1.12
KCMF1-201ENST00000409785 DDX10Q13206 875 aaKnown RBP22.06■■□□□ 1.12
KCMF1-201ENST00000409785 PPP1R15AO75807 674 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms