RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 DCAF8L2P0C7V8 631 aa27.84■■■□□ 2.05
CACNA1A-221ENST00000636012 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
CACNA1A-221ENST00000636012 EHMT2Q96KQ7 1210 aa25.89■■□□□ 1.74
CACNA1A-221ENST00000636012 PELP1Q8IZL8 1130 aaKnown RBP25.51■■□□□ 1.67
CACNA1A-221ENST00000636012 SHROOM4Q9ULL8 1493 aa25.44■■□□□ 1.66
CACNA1A-221ENST00000636012 ERICH6Q7L0X2 663 aa25.17■■□□□ 1.62
CACNA1A-221ENST00000636012 APLP2Q06481 763 aa25.14■■□□□ 1.62
CACNA1A-221ENST00000636012 MYT1Q01538 1121 aa25.09■■□□□ 1.61
CACNA1A-221ENST00000636012 FAM9AQ8IZU1 332 aaPredicted RBP24.97■■□□□ 1.59
CACNA1A-221ENST00000636012 TTBK1Q5TCY1 1321 aaPredicted RBP24.96■■□□□ 1.59
CACNA1A-221ENST00000636012 RANGAP1P46060 587 aaPredicted RBP24.7■■□□□ 1.54
CACNA1A-221ENST00000636012 ATP1B4Q9UN42 357 aaPredicted RBP24.62■■□□□ 1.53
CACNA1A-221ENST00000636012 NISCHQ9Y2I1 1504 aa24.59■■□□□ 1.53
CACNA1A-221ENST00000636012 PCGF6Q9BYE7 350 aa24.43■■□□□ 1.5
CACNA1A-221ENST00000636012 CCER1Q8TC90 406 aaPredicted RBP24.39■■□□□ 1.49
CACNA1A-221ENST00000636012 CENPBP07199 599 aaPredicted RBP24.03■■□□□ 1.44
CACNA1A-221ENST00000636012 UBTFP17480 764 aaKnown RBP23.95■■□□□ 1.43
CACNA1A-221ENST00000636012 MYT1LQ9UL68 1186 aa23.89■■□□□ 1.42
CACNA1A-221ENST00000636012 TRIM41Q8WV44 630 aa23.89■■□□□ 1.42
CACNA1A-221ENST00000636012 NEFLP07196 543 aa23.87■■□□□ 1.41
CACNA1A-221ENST00000636012 YTHDC1Q96MU7 727 aaKnown RBP23.86■■□□□ 1.41
CACNA1A-221ENST00000636012 DAXXQ9UER7 740 aaPredicted RBP23.79■■□□□ 1.4
CACNA1A-221ENST00000636012 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
CACNA1A-221ENST00000636012 ZEB1P37275 1124 aaPredicted RBP23.69■■□□□ 1.38
CACNA1A-221ENST00000636012 POLR3GLQ9BT43 218 aa23.67■■□□□ 1.38
CACNA1A-221ENST00000636012 PPARGC1BQ86YN6 1023 aaKnown RBP23.66■■□□□ 1.38
CACNA1A-221ENST00000636012 CNGB1Q14028 1251 aaPredicted RBP23.62■■□□□ 1.37
CACNA1A-221ENST00000636012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.58■■□□□ 1.37
CACNA1A-221ENST00000636012 HNRNPUL2Q1KMD3 747 aaKnown RBP23.58■■□□□ 1.37
CACNA1A-221ENST00000636012 ITGAEP38570 1179 aa23.47■■□□□ 1.35
CACNA1A-221ENST00000636012 SLC4A1APQ9BWU0 796 aaKnown RBP23.47■■□□□ 1.35
CACNA1A-221ENST00000636012 BCL11AQ9H165 835 aa23.18■■□□□ 1.3
CACNA1A-221ENST00000636012 ZNF316A6NFI3 1004 aaPredicted RBP23.14■■□□□ 1.29
CACNA1A-221ENST00000636012 CLSPNQ9HAW4 1339 aa23.09■■□□□ 1.29
CACNA1A-221ENST00000636012 SLC24A1O60721 1099 aa22.93■■□□□ 1.26
CACNA1A-221ENST00000636012 TRIM26Q12899 539 aaPredicted RBP22.88■■□□□ 1.25
CACNA1A-221ENST00000636012 RTL5Q5HYW3 569 aaPredicted RBP22.85■■□□□ 1.25
CACNA1A-221ENST00000636012 FAM50AQ14320 339 aaKnown RBP22.72■■□□□ 1.23
CACNA1A-221ENST00000636012 LOC105371045A0A1W2PR82 267 aa22.67■■□□□ 1.22
CACNA1A-221ENST00000636012 TRIM52Q96A61 297 aa22.67■■□□□ 1.22
CACNA1A-221ENST00000636012 HRCP23327 699 aa22.65■■□□□ 1.22
CACNA1A-221ENST00000636012 BCANQ96GW7 911 aa22.61■■□□□ 1.21
CACNA1A-221ENST00000636012 ZBTB47Q9UFB7 747 aaPredicted RBP22.59■■□□□ 1.21
CACNA1A-221ENST00000636012 NEUROD1Q13562 356 aa22.56■■□□□ 1.2
CACNA1A-221ENST00000636012 ZNF326Q5BKZ1 582 aaKnown RBP22.52■■□□□ 1.2
CACNA1A-221ENST00000636012 FBLN2P98095 1184 aa22.48■■□□□ 1.19
CACNA1A-221ENST00000636012 EIF5BO60841 1220 aaKnown RBP22.38■■□□□ 1.17
CACNA1A-221ENST00000636012 DIEXFQ68CQ4 756 aaKnown RBP22.37■■□□□ 1.17
CACNA1A-221ENST00000636012 CANXP27824 592 aaKnown RBP22.36■■□□□ 1.17
CACNA1A-221ENST00000636012 PLPPR3Q6T4P5 718 aa22.3■■□□□ 1.16
CACNA1A-221ENST00000636012 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
CACNA1A-221ENST00000636012 NEFMP07197 916 aa22.27■■□□□ 1.16
CACNA1A-221ENST00000636012 ANP32CO43423 234 aa22.2■■□□□ 1.14
CACNA1A-221ENST00000636012 ARID3CA6NKF2 412 aa22.19■■□□□ 1.14
CACNA1A-221ENST00000636012 CDK11AQ9UQ88 783 aaPredicted RBP22.14■■□□□ 1.14
CACNA1A-221ENST00000636012 ESF1Q9H501 851 aaKnown RBP22.07■■□□□ 1.12
CACNA1A-221ENST00000636012 TULP1O00294 542 aaPredicted RBP22.06■■□□□ 1.12
CACNA1A-221ENST00000636012 ARXQ96QS3 562 aa22.06■■□□□ 1.12
CACNA1A-221ENST00000636012 ABCC9O60706 1549 aa22.03■■□□□ 1.12
CACNA1A-221ENST00000636012 P3H3Q8IVL6 736 aa22.03■■□□□ 1.12
CACNA1A-221ENST00000636012 ZNF777Q9ULD5 760 aaPredicted RBP22.01■■□□□ 1.11
CACNA1A-221ENST00000636012 NPM2Q86SE8 214 aaKnown RBP22.01■■□□□ 1.11
CACNA1A-221ENST00000636012 NCBP3Q53F19 620 aaKnown RBP22■■□□□ 1.11
CACNA1A-221ENST00000636012 STAG3Q9UJ98 1225 aa21.99■■□□□ 1.11
CACNA1A-221ENST00000636012 CHGAP10645 457 aaKnown RBP21.94■■□□□ 1.1
CACNA1A-221ENST00000636012 HSP90AA1P07900 732 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-221ENST00000636012 GTF3C3Q9Y5Q9 886 aa21.86■■□□□ 1.09
CACNA1A-221ENST00000636012 SCAF1Q9H7N4 1312 aaKnown RBP21.86■■□□□ 1.09
CACNA1A-221ENST00000636012 CDK11BP21127 795 aaKnown RBP21.85■■□□□ 1.09
CACNA1A-221ENST00000636012 ANP32BQ92688 251 aaKnown RBP21.85■■□□□ 1.09
CACNA1A-221ENST00000636012 A0A0G2JS52 829 aa21.84■■□□□ 1.09
CACNA1A-221ENST00000636012 ANP32AP39687 249 aaKnown RBP21.81■■□□□ 1.08
CACNA1A-221ENST00000636012 PLEKHG5O94827 1062 aa21.72■■□□□ 1.07
CACNA1A-221ENST00000636012 SALL2Q9Y467 1007 aaPredicted RBP21.72■■□□□ 1.07
CACNA1A-221ENST00000636012 NPM1P06748 294 aaKnown RBP eCLIP21.64■■□□□ 1.05
CACNA1A-221ENST00000636012 SENP3Q9H4L4 574 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-221ENST00000636012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.62■■□□□ 1.05
CACNA1A-221ENST00000636012 GLIPR1L2Q4G1C9 344 aa21.62■■□□□ 1.05
CACNA1A-221ENST00000636012 UPF2Q9HAU5 1272 aaKnown RBP21.61■■□□□ 1.05
CACNA1A-221ENST00000636012 AMER1Q5JTC6 1135 aaPredicted RBP21.61■■□□□ 1.05
CACNA1A-221ENST00000636012 ZBTB7CA1YPR0 619 aa21.6■■□□□ 1.05
CACNA1A-221ENST00000636012 TPRNQ4KMQ1 711 aa21.56■■□□□ 1.04
CACNA1A-221ENST00000636012 FAM9BQ8IZU0 186 aa21.54■■□□□ 1.04
CACNA1A-221ENST00000636012 NBR1Q14596 966 aa21.53■■□□□ 1.04
CACNA1A-221ENST00000636012 C14orf37Q86TY3 774 aa21.49■■□□□ 1.03
CACNA1A-221ENST00000636012 TAOK2Q9UL54 1235 aa21.47■■□□□ 1.03
CACNA1A-221ENST00000636012 FKBP8Q14318 412 aa21.46■■□□□ 1.03
CACNA1A-221ENST00000636012 TONSLQ96HA7 1378 aa21.46■■□□□ 1.03
CACNA1A-221ENST00000636012 HNRNPUQ00839 825 aaKnown RBP eCLIP21.44■■□□□ 1.02
CACNA1A-221ENST00000636012 KDM2AQ9Y2K7 1162 aa21.43■■□□□ 1.02
CACNA1A-221ENST00000636012 TMC1Q8TDI8 760 aa21.4■■□□□ 1.02
CACNA1A-221ENST00000636012 WDR43Q15061 677 aaKnown RBP eCLIP21.4■■□□□ 1.02
CACNA1A-221ENST00000636012 CHIC2Q9UKJ5 165 aa21.39■■□□□ 1.01
CACNA1A-221ENST00000636012 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.36■■□□□ 1.01
CACNA1A-221ENST00000636012 DDX10Q13206 875 aaKnown RBP21.34■■□□□ 1.01
CACNA1A-221ENST00000636012 HAP1P54257 671 aaPredicted RBP21.31■■□□□ 1
CACNA1A-221ENST00000636012 MYH16Q9H6N6 1097 aa21.31■■□□□ 1
CACNA1A-221ENST00000636012 SCRIBQ14160 1630 aa21.28■■□□□ 1
CACNA1A-221ENST00000636012 CCDC136Q96JN2 1154 aa21.28■■□□□ 1
CACNA1A-221ENST00000636012 CSRNP3Q8WYN3 585 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms