RNA–Protein interactions for RNA: ENST00000257879.10

ITGA7-201, Transcript of integrin subunit alpha 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGA7, Length 4,120 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-201ENST00000257879 NISCHQ9Y2I1 1504 aa32.97■■■□□ 2.87
ITGA7-201ENST00000257879 SUPT5HO00267 1087 aaKnown RBP29.88■■■□□ 2.37
ITGA7-201ENST00000257879 SHROOM4Q9ULL8 1493 aa29.73■■■□□ 2.35
ITGA7-201ENST00000257879 DCAF8L2P0C7V8 631 aa29.66■■■□□ 2.34
ITGA7-201ENST00000257879 PCGF6Q9BYE7 350 aa28.71■■■□□ 2.19
ITGA7-201ENST00000257879 HRCP23327 699 aa28.54■■■□□ 2.16
ITGA7-201ENST00000257879 CHIC1Q5VXU3 224 aa28.36■■■□□ 2.13
ITGA7-201ENST00000257879 ZEB1P37275 1124 aaPredicted RBP28.13■■■□□ 2.09
ITGA7-201ENST00000257879 TRIM26Q12899 539 aaPredicted RBP27.94■■■□□ 2.06
ITGA7-201ENST00000257879 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
ITGA7-201ENST00000257879 PELP1Q8IZL8 1130 aaKnown RBP27.79■■■□□ 2.04
ITGA7-201ENST00000257879 FAM9AQ8IZU1 332 aaPredicted RBP27.78■■■□□ 2.04
ITGA7-201ENST00000257879 EHMT2Q96KQ7 1210 aa27.76■■■□□ 2.03
ITGA7-201ENST00000257879 ZCCHC6Q5VYS8 1495 aaKnown RBP27.74■■■□□ 2.03
ITGA7-201ENST00000257879 LOC105371045A0A1W2PR82 267 aa27.73■■■□□ 2.03
ITGA7-201ENST00000257879 PPARGC1BQ86YN6 1023 aaKnown RBP27.68■■■□□ 2.02
ITGA7-201ENST00000257879 DCAF1Q9Y4B6 1507 aa27.39■■□□□ 1.97
ITGA7-201ENST00000257879 CCDC180Q9P1Z9 1646 aa27.35■■□□□ 1.97
ITGA7-201ENST00000257879 CCER1Q8TC90 406 aaPredicted RBP27.35■■□□□ 1.97
ITGA7-201ENST00000257879 CENPBP07199 599 aaPredicted RBP27.34■■□□□ 1.97
ITGA7-201ENST00000257879 MYO15BQ96JP2 1530 aa27.29■■□□□ 1.96
ITGA7-201ENST00000257879 APLP2Q06481 763 aa27.02■■□□□ 1.92
ITGA7-201ENST00000257879 TTBK1Q5TCY1 1321 aaPredicted RBP27■■□□□ 1.91
ITGA7-201ENST00000257879 MYT1Q01538 1121 aa26.93■■□□□ 1.9
ITGA7-201ENST00000257879 UBTFP17480 764 aaKnown RBP26.81■■□□□ 1.88
ITGA7-201ENST00000257879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.71■■□□□ 1.87
ITGA7-201ENST00000257879 DIEXFQ68CQ4 756 aaKnown RBP26.64■■□□□ 1.86
ITGA7-201ENST00000257879 YTHDC1Q96MU7 727 aaKnown RBP26.51■■□□□ 1.83
ITGA7-201ENST00000257879 ACIN1Q9UKV3 1341 aaKnown RBP26.45■■□□□ 1.83
ITGA7-201ENST00000257879 RSF1Q96T23 1441 aaPredicted RBP26.43■■□□□ 1.82
ITGA7-201ENST00000257879 SCRIBQ14160 1630 aa26.38■■□□□ 1.81
ITGA7-201ENST00000257879 GTF3C3Q9Y5Q9 886 aa26.34■■□□□ 1.81
ITGA7-201ENST00000257879 SCAF1Q9H7N4 1312 aaKnown RBP26.31■■□□□ 1.8
ITGA7-201ENST00000257879 RANGAP1P46060 587 aaPredicted RBP26.31■■□□□ 1.8
ITGA7-201ENST00000257879 HNRNPUL2Q1KMD3 747 aaKnown RBP26.26■■□□□ 1.79
ITGA7-201ENST00000257879 ZNF316A6NFI3 1004 aaPredicted RBP26.22■■□□□ 1.79
ITGA7-201ENST00000257879 ABCC9O60706 1549 aa26.18■■□□□ 1.78
ITGA7-201ENST00000257879 RB1CC1Q8TDY2 1594 aa26.11■■□□□ 1.77
ITGA7-201ENST00000257879 CSRNP3Q8WYN3 585 aa26.09■■□□□ 1.77
ITGA7-201ENST00000257879 NEUROD1Q13562 356 aa26.07■■□□□ 1.76
ITGA7-201ENST00000257879 NEFLP07196 543 aa25.89■■□□□ 1.74
ITGA7-201ENST00000257879 EEA1Q15075 1411 aa25.78■■□□□ 1.72
ITGA7-201ENST00000257879 NACADO15069 1562 aa25.77■■□□□ 1.72
ITGA7-201ENST00000257879 CEP162Q5TB80 1403 aa25.75■■□□□ 1.71
ITGA7-201ENST00000257879 CLSPNQ9HAW4 1339 aa25.7■■□□□ 1.7
ITGA7-201ENST00000257879 TNIKQ9UKE5 1360 aa25.7■■□□□ 1.7
ITGA7-201ENST00000257879 CECR2Q9BXF3 1484 aa25.7■■□□□ 1.7
ITGA7-201ENST00000257879 ITGAEP38570 1179 aa25.69■■□□□ 1.7
ITGA7-201ENST00000257879 ATP1B4Q9UN42 357 aaPredicted RBP25.66■■□□□ 1.7
ITGA7-201ENST00000257879 ERICH6Q7L0X2 663 aa25.6■■□□□ 1.69
ITGA7-201ENST00000257879 PABPN1Q86U42 306 aaKnown RBP eCLIP25.57■■□□□ 1.68
ITGA7-201ENST00000257879 MROH2BQ7Z745 1585 aa25.57■■□□□ 1.68
ITGA7-201ENST00000257879 GOLGA3Q08378 1498 aa25.56■■□□□ 1.68
ITGA7-201ENST00000257879 BAZ1AQ9NRL2 1556 aaPredicted RBP25.55■■□□□ 1.68
ITGA7-201ENST00000257879 MIER1Q8N108 512 aa25.55■■□□□ 1.68
ITGA7-201ENST00000257879 CLIP1P30622 1438 aa25.48■■□□□ 1.67
ITGA7-201ENST00000257879 WRNQ14191 1432 aaPredicted RBP eCLIP25.4■■□□□ 1.66
ITGA7-201ENST00000257879 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
ITGA7-201ENST00000257879 SOGA1O94964 1423 aa25.33■■□□□ 1.64
ITGA7-201ENST00000257879 WIZO95785 1651 aa25.29■■□□□ 1.64
ITGA7-201ENST00000257879 CCDC88BA6NC98 1476 aa25.28■■□□□ 1.64
ITGA7-201ENST00000257879 FAM50AQ14320 339 aaKnown RBP25.27■■□□□ 1.64
ITGA7-201ENST00000257879 ABCC8Q09428 1581 aa25.21■■□□□ 1.63
ITGA7-201ENST00000257879 ANP32CO43423 234 aa25.21■■□□□ 1.63
ITGA7-201ENST00000257879 BCANQ96GW7 911 aa25.19■■□□□ 1.62
ITGA7-201ENST00000257879 TOP2AP11388 1531 aaKnown RBP25.16■■□□□ 1.62
ITGA7-201ENST00000257879 VPS8Q8N3P4 1428 aa25.11■■□□□ 1.61
ITGA7-201ENST00000257879 FKBP8Q14318 412 aa25■■□□□ 1.59
ITGA7-201ENST00000257879 DDX10Q13206 875 aaKnown RBP24.97■■□□□ 1.59
ITGA7-201ENST00000257879 CDK11AQ9UQ88 783 aaPredicted RBP24.92■■□□□ 1.58
ITGA7-201ENST00000257879 SUPT16HQ9Y5B9 1047 aaKnown RBP24.92■■□□□ 1.58
ITGA7-201ENST00000257879 BAZ1BQ9UIG0 1483 aaKnown RBP24.9■■□□□ 1.58
ITGA7-201ENST00000257879 SMARCA4P51532 1647 aa24.85■■□□□ 1.57
ITGA7-201ENST00000257879 RUSC2Q8N2Y8 1516 aa24.84■■□□□ 1.57
ITGA7-201ENST00000257879 TONSLQ96HA7 1378 aa24.83■■□□□ 1.56
ITGA7-201ENST00000257879 KIF27Q86VH2 1401 aa24.82■■□□□ 1.56
ITGA7-201ENST00000257879 P3H3Q8IVL6 736 aa24.8■■□□□ 1.56
ITGA7-201ENST00000257879 CCNB3Q8WWL7 1395 aa24.79■■□□□ 1.56
ITGA7-201ENST00000257879 SMARCA2P51531 1590 aa24.79■■□□□ 1.56
ITGA7-201ENST00000257879 TRIM52Q96A61 297 aa24.78■■□□□ 1.56
ITGA7-201ENST00000257879 ANP32EQ9BTT0 268 aa24.75■■□□□ 1.55
ITGA7-201ENST00000257879 POLR3GLQ9BT43 218 aa24.68■■□□□ 1.54
ITGA7-201ENST00000257879 TIMELESSQ9UNS1 1208 aa24.67■■□□□ 1.54
ITGA7-201ENST00000257879 DHX57Q6P158 1386 aaKnown RBP24.67■■□□□ 1.54
ITGA7-201ENST00000257879 HNRNPUQ00839 825 aaKnown RBP eCLIP24.66■■□□□ 1.54
ITGA7-201ENST00000257879 RAPGEF2Q9Y4G8 1499 aa24.66■■□□□ 1.54
ITGA7-201ENST00000257879 KANK4Q5T7N3 995 aaPredicted RBP24.66■■□□□ 1.54
ITGA7-201ENST00000257879 RTL5Q5HYW3 569 aaPredicted RBP24.56■■□□□ 1.52
ITGA7-201ENST00000257879 HIRIP3Q9BW71 556 aaPredicted RBP24.53■■□□□ 1.52
ITGA7-201ENST00000257879 CCER2I3L3R5 266 aa24.53■■□□□ 1.52
ITGA7-201ENST00000257879 KIF21BO75037 1637 aa24.53■■□□□ 1.52
ITGA7-201ENST00000257879 SETD5Q9C0A6 1442 aa24.53■■□□□ 1.52
ITGA7-201ENST00000257879 CNGB1Q14028 1251 aaPredicted RBP24.52■■□□□ 1.52
ITGA7-201ENST00000257879 SIN3AQ96ST3 1273 aa24.52■■□□□ 1.52
ITGA7-201ENST00000257879 TSHZ2Q9NRE2 1034 aa24.52■■□□□ 1.52
ITGA7-201ENST00000257879 MYT1LQ9UL68 1186 aa24.51■■□□□ 1.51
ITGA7-201ENST00000257879 RAB3GAP2Q9H2M9 1393 aa24.49■■□□□ 1.51
ITGA7-201ENST00000257879 MTUS2Q5JR59 1369 aa24.49■■□□□ 1.51
ITGA7-201ENST00000257879 FHAD1B1AJZ9 1412 aa24.49■■□□□ 1.51
ITGA7-201ENST00000257879 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms