RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 DCAF8L2P0C7V8 631 aa27.06■■□□□ 1.92
ITSN1-209ENST00000399352 SUPT5HO00267 1087 aaKnown RBP26.21■■□□□ 1.79
ITSN1-209ENST00000399352 PELP1Q8IZL8 1130 aaKnown RBP26■■□□□ 1.75
ITSN1-209ENST00000399352 EHMT2Q96KQ7 1210 aa25.72■■□□□ 1.71
ITSN1-209ENST00000399352 SHROOM4Q9ULL8 1493 aa25.4■■□□□ 1.66
ITSN1-209ENST00000399352 PCGF6Q9BYE7 350 aa25.17■■□□□ 1.62
ITSN1-209ENST00000399352 ERICH6Q7L0X2 663 aa25.11■■□□□ 1.61
ITSN1-209ENST00000399352 CENPBP07199 599 aaPredicted RBP25.02■■□□□ 1.6
ITSN1-209ENST00000399352 APLP2Q06481 763 aa24.99■■□□□ 1.59
ITSN1-209ENST00000399352 TTBK1Q5TCY1 1321 aaPredicted RBP24.96■■□□□ 1.59
ITSN1-209ENST00000399352 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
ITSN1-209ENST00000399352 CCER1Q8TC90 406 aaPredicted RBP24.8■■□□□ 1.56
ITSN1-209ENST00000399352 MYT1Q01538 1121 aa24.76■■□□□ 1.55
ITSN1-209ENST00000399352 ZEB1P37275 1124 aaPredicted RBP24.62■■□□□ 1.53
ITSN1-209ENST00000399352 YTHDC1Q96MU7 727 aaKnown RBP24.55■■□□□ 1.52
ITSN1-209ENST00000399352 NISCHQ9Y2I1 1504 aa24.5■■□□□ 1.51
ITSN1-209ENST00000399352 NEFLP07196 543 aa24.4■■□□□ 1.5
ITSN1-209ENST00000399352 RANGAP1P46060 587 aaPredicted RBP24.33■■□□□ 1.48
ITSN1-209ENST00000399352 TRIM41Q8WV44 630 aa24.07■■□□□ 1.44
ITSN1-209ENST00000399352 ATP1B4Q9UN42 357 aaPredicted RBP24.01■■□□□ 1.43
ITSN1-209ENST00000399352 PPARGC1BQ86YN6 1023 aaKnown RBP23.94■■□□□ 1.42
ITSN1-209ENST00000399352 HRCP23327 699 aa23.89■■□□□ 1.41
ITSN1-209ENST00000399352 UBTFP17480 764 aaKnown RBP23.88■■□□□ 1.41
ITSN1-209ENST00000399352 DAXXQ9UER7 740 aaPredicted RBP23.77■■□□□ 1.4
ITSN1-209ENST00000399352 TRIM26Q12899 539 aaPredicted RBP23.75■■□□□ 1.39
ITSN1-209ENST00000399352 POLR3GLQ9BT43 218 aa23.47■■□□□ 1.35
ITSN1-209ENST00000399352 RTL5Q5HYW3 569 aaPredicted RBP23.44■■□□□ 1.34
ITSN1-209ENST00000399352 CNGB1Q14028 1251 aaPredicted RBP23.41■■□□□ 1.34
ITSN1-209ENST00000399352 ITGAEP38570 1179 aa23.41■■□□□ 1.34
ITSN1-209ENST00000399352 LOC105371045A0A1W2PR82 267 aa23.31■■□□□ 1.32
ITSN1-209ENST00000399352 HNRNPUL2Q1KMD3 747 aaKnown RBP23.3■■□□□ 1.32
ITSN1-209ENST00000399352 DIEXFQ68CQ4 756 aaKnown RBP23.29■■□□□ 1.32
ITSN1-209ENST00000399352 ZNF316A6NFI3 1004 aaPredicted RBP23.24■■□□□ 1.31
ITSN1-209ENST00000399352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.18■■□□□ 1.3
ITSN1-209ENST00000399352 GTF3C3Q9Y5Q9 886 aa23.17■■□□□ 1.3
ITSN1-209ENST00000399352 BCANQ96GW7 911 aa23.15■■□□□ 1.3
ITSN1-209ENST00000399352 CLSPNQ9HAW4 1339 aa23.13■■□□□ 1.29
ITSN1-209ENST00000399352 CHIC1Q5VXU3 224 aa23.01■■□□□ 1.27
ITSN1-209ENST00000399352 MYT1LQ9UL68 1186 aa22.91■■□□□ 1.26
ITSN1-209ENST00000399352 SLC4A1APQ9BWU0 796 aaKnown RBP22.84■■□□□ 1.25
ITSN1-209ENST00000399352 CDK11AQ9UQ88 783 aaPredicted RBP22.83■■□□□ 1.25
ITSN1-209ENST00000399352 ACIN1Q9UKV3 1341 aaKnown RBP22.69■■□□□ 1.22
ITSN1-209ENST00000399352 NEUROD1Q13562 356 aa22.67■■□□□ 1.22
ITSN1-209ENST00000399352 EIF5BO60841 1220 aaKnown RBP22.62■■□□□ 1.21
ITSN1-209ENST00000399352 ANP32CO43423 234 aa22.61■■□□□ 1.21
ITSN1-209ENST00000399352 FAM50AQ14320 339 aaKnown RBP22.59■■□□□ 1.21
ITSN1-209ENST00000399352 TRIM52Q96A61 297 aa22.52■■□□□ 1.2
ITSN1-209ENST00000399352 ANP32AP39687 249 aaKnown RBP22.49■■□□□ 1.19
ITSN1-209ENST00000399352 NPM2Q86SE8 214 aaKnown RBP22.46■■□□□ 1.19
ITSN1-209ENST00000399352 BCL11AQ9H165 835 aa22.46■■□□□ 1.19
ITSN1-209ENST00000399352 ZNF326Q5BKZ1 582 aaKnown RBP22.42■■□□□ 1.18
ITSN1-209ENST00000399352 ZBTB47Q9UFB7 747 aaPredicted RBP22.4■■□□□ 1.18
ITSN1-209ENST00000399352 CANXP27824 592 aaKnown RBP22.34■■□□□ 1.17
ITSN1-209ENST00000399352 FKBP8Q14318 412 aa22.31■■□□□ 1.16
ITSN1-209ENST00000399352 GLIPR1L2Q4G1C9 344 aa22.18■■□□□ 1.14
ITSN1-209ENST00000399352 NBR1Q14596 966 aa22.17■■□□□ 1.14
ITSN1-209ENST00000399352 ANP32BQ92688 251 aaKnown RBP22.14■■□□□ 1.13
ITSN1-209ENST00000399352 SLC24A1O60721 1099 aa22.1■■□□□ 1.13
ITSN1-209ENST00000399352 SCAF1Q9H7N4 1312 aaKnown RBP22.05■■□□□ 1.12
ITSN1-209ENST00000399352 HSP90AA1P07900 732 aaKnown RBP22.03■■□□□ 1.12
ITSN1-209ENST00000399352 ARXQ96QS3 562 aa22.03■■□□□ 1.12
ITSN1-209ENST00000399352 HNRNPUQ00839 825 aaKnown RBP eCLIP22.02■■□□□ 1.12
ITSN1-209ENST00000399352 NEFMP07197 916 aa21.95■■□□□ 1.1
ITSN1-209ENST00000399352 FAM9BQ8IZU0 186 aa21.92■■□□□ 1.1
ITSN1-209ENST00000399352 UPF2Q9HAU5 1272 aaKnown RBP21.91■■□□□ 1.1
ITSN1-209ENST00000399352 DDX10Q13206 875 aaKnown RBP21.9■■□□□ 1.1
ITSN1-209ENST00000399352 CCDC136Q96JN2 1154 aa21.88■■□□□ 1.09
ITSN1-209ENST00000399352 SALL2Q9Y467 1007 aaPredicted RBP21.87■■□□□ 1.09
ITSN1-209ENST00000399352 IRX6P78412 446 aaPredicted RBP21.81■■□□□ 1.08
ITSN1-209ENST00000399352 P3H3Q8IVL6 736 aa21.77■■□□□ 1.08
ITSN1-209ENST00000399352 ARID3CA6NKF2 412 aa21.77■■□□□ 1.07
ITSN1-209ENST00000399352 MIER1Q8N108 512 aa21.72■■□□□ 1.07
ITSN1-209ENST00000399352 TONSLQ96HA7 1378 aa21.71■■□□□ 1.07
ITSN1-209ENST00000399352 ANP32EQ9BTT0 268 aa21.66■■□□□ 1.06
ITSN1-209ENST00000399352 ZNF777Q9ULD5 760 aaPredicted RBP21.63■■□□□ 1.05
ITSN1-209ENST00000399352 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.63■■□□□ 1.05
ITSN1-209ENST00000399352 CSRNP3Q8WYN3 585 aa21.63■■□□□ 1.05
ITSN1-209ENST00000399352 TMC1Q8TDI8 760 aa21.62■■□□□ 1.05
ITSN1-209ENST00000399352 MRS2Q9HD23 443 aa21.6■■□□□ 1.05
ITSN1-209ENST00000399352 FBLN2P98095 1184 aa21.58■■□□□ 1.05
ITSN1-209ENST00000399352 RTN4Q9NQC3 1192 aaKnown RBP21.54■■□□□ 1.04
ITSN1-209ENST00000399352 TRIM44Q96DX7 344 aaPredicted RBP21.53■■□□□ 1.04
ITSN1-209ENST00000399352 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.03
ITSN1-209ENST00000399352 HIRIP3Q9BW71 556 aaPredicted RBP21.52■■□□□ 1.03
ITSN1-209ENST00000399352 DCAF1Q9Y4B6 1507 aa21.48■■□□□ 1.03
ITSN1-209ENST00000399352 WDR43Q15061 677 aaKnown RBP eCLIP21.45■■□□□ 1.02
ITSN1-209ENST00000399352 DDRGK1Q96HY6 314 aa21.45■■□□□ 1.02
ITSN1-209ENST00000399352 CHGAP10645 457 aaKnown RBP21.42■■□□□ 1.02
ITSN1-209ENST00000399352 BECN1Q14457 450 aa21.41■■□□□ 1.02
ITSN1-209ENST00000399352 TNNT2P45379 298 aaPredicted RBP21.39■■□□□ 1.01
ITSN1-209ENST00000399352 NAP1L5Q96NT1 182 aaPredicted RBP21.36■■□□□ 1.01
ITSN1-209ENST00000399352 SENP3-EIF4A1A0A087X0R7 540 aa21.36■■□□□ 1.01
ITSN1-209ENST00000399352 CHIC2Q9UKJ5 165 aa21.35■■□□□ 1.01
ITSN1-209ENST00000399352 LAS1LQ9Y4W2 734 aaKnown RBP21.35■■□□□ 1.01
ITSN1-209ENST00000399352 ERICH6BQ5W0A0 696 aa21.35■■□□□ 1.01
ITSN1-209ENST00000399352 NCLP19338 710 aaKnown RBP21.34■■□□□ 1.01
ITSN1-209ENST00000399352 SUPT16HQ9Y5B9 1047 aaKnown RBP21.31■■□□□ 1
ITSN1-209ENST00000399352 GOLGA6L22H0YM25 854 aa21.3■■□□□ 1
ITSN1-209ENST00000399352 PTMAP06454 111 aaKnown RBP21.3■■□□□ 1
ITSN1-209ENST00000399352 KDM2AQ9Y2K7 1162 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms