RNA–Protein interactions for RNA: ENST00000393127.6

GRIA4-203, Transcript of glutamate ionotropic receptor AMPA type subunit 4, humanhuman

TSL 5 BASIC

Gene GRIA4, Length 5,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4-203ENST00000393127 DCAF8L2P0C7V8 631 aa28.14■■■□□ 2.1
GRIA4-203ENST00000393127 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
GRIA4-203ENST00000393127 PELP1Q8IZL8 1130 aaKnown RBP26.45■■□□□ 1.82
GRIA4-203ENST00000393127 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
GRIA4-203ENST00000393127 EHMT2Q96KQ7 1210 aa26.42■■□□□ 1.82
GRIA4-203ENST00000393127 NISCHQ9Y2I1 1504 aa26.26■■□□□ 1.79
GRIA4-203ENST00000393127 APLP2Q06481 763 aa25.84■■□□□ 1.73
GRIA4-203ENST00000393127 PCGF6Q9BYE7 350 aa25.68■■□□□ 1.7
GRIA4-203ENST00000393127 TTBK1Q5TCY1 1321 aaPredicted RBP25.6■■□□□ 1.69
GRIA4-203ENST00000393127 FAM9AQ8IZU1 332 aaPredicted RBP25.58■■□□□ 1.69
GRIA4-203ENST00000393127 ERICH6Q7L0X2 663 aa25.48■■□□□ 1.67
GRIA4-203ENST00000393127 CENPBP07199 599 aaPredicted RBP25.46■■□□□ 1.67
GRIA4-203ENST00000393127 ZEB1P37275 1124 aaPredicted RBP25.3■■□□□ 1.64
GRIA4-203ENST00000393127 CCER1Q8TC90 406 aaPredicted RBP25.25■■□□□ 1.63
GRIA4-203ENST00000393127 RANGAP1P46060 587 aaPredicted RBP25.12■■□□□ 1.61
GRIA4-203ENST00000393127 TRIM41Q8WV44 630 aa24.97■■□□□ 1.59
GRIA4-203ENST00000393127 YTHDC1Q96MU7 727 aaKnown RBP24.97■■□□□ 1.59
GRIA4-203ENST00000393127 MYT1Q01538 1121 aa24.91■■□□□ 1.58
GRIA4-203ENST00000393127 NEFLP07196 543 aa24.88■■□□□ 1.57
GRIA4-203ENST00000393127 ATP1B4Q9UN42 357 aaPredicted RBP24.86■■□□□ 1.57
GRIA4-203ENST00000393127 UBTFP17480 764 aaKnown RBP24.73■■□□□ 1.55
GRIA4-203ENST00000393127 PPARGC1BQ86YN6 1023 aaKnown RBP24.57■■□□□ 1.52
GRIA4-203ENST00000393127 TRIM26Q12899 539 aaPredicted RBP24.45■■□□□ 1.51
GRIA4-203ENST00000393127 HRCP23327 699 aa24.37■■□□□ 1.49
GRIA4-203ENST00000393127 DAXXQ9UER7 740 aaPredicted RBP24.23■■□□□ 1.47
GRIA4-203ENST00000393127 ITGAEP38570 1179 aa24.11■■□□□ 1.45
GRIA4-203ENST00000393127 POLR3GLQ9BT43 218 aa24.1■■□□□ 1.45
GRIA4-203ENST00000393127 LOC105371045A0A1W2PR82 267 aa24.01■■□□□ 1.43
GRIA4-203ENST00000393127 HNRNPUL2Q1KMD3 747 aaKnown RBP23.97■■□□□ 1.43
GRIA4-203ENST00000393127 CNGB1Q14028 1251 aaPredicted RBP23.91■■□□□ 1.42
GRIA4-203ENST00000393127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.82■■□□□ 1.4
GRIA4-203ENST00000393127 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
GRIA4-203ENST00000393127 MYT1LQ9UL68 1186 aa23.8■■□□□ 1.4
GRIA4-203ENST00000393127 DIEXFQ68CQ4 756 aaKnown RBP23.8■■□□□ 1.4
GRIA4-203ENST00000393127 RTL5Q5HYW3 569 aaPredicted RBP23.77■■□□□ 1.4
GRIA4-203ENST00000393127 ZNF316A6NFI3 1004 aaPredicted RBP23.71■■□□□ 1.39
GRIA4-203ENST00000393127 CLSPNQ9HAW4 1339 aa23.6■■□□□ 1.37
GRIA4-203ENST00000393127 SLC4A1APQ9BWU0 796 aaKnown RBP23.56■■□□□ 1.36
GRIA4-203ENST00000393127 BCANQ96GW7 911 aa23.51■■□□□ 1.35
GRIA4-203ENST00000393127 GTF3C3Q9Y5Q9 886 aa23.49■■□□□ 1.35
GRIA4-203ENST00000393127 FAM50AQ14320 339 aaKnown RBP23.42■■□□□ 1.34
GRIA4-203ENST00000393127 NEUROD1Q13562 356 aa23.37■■□□□ 1.33
GRIA4-203ENST00000393127 TRIM52Q96A61 297 aa23.33■■□□□ 1.32
GRIA4-203ENST00000393127 CDK11AQ9UQ88 783 aaPredicted RBP23.3■■□□□ 1.32
GRIA4-203ENST00000393127 ANP32CO43423 234 aa23.26■■□□□ 1.31
GRIA4-203ENST00000393127 ZNF326Q5BKZ1 582 aaKnown RBP23.12■■□□□ 1.29
GRIA4-203ENST00000393127 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.29
GRIA4-203ENST00000393127 ZBTB47Q9UFB7 747 aaPredicted RBP23.02■■□□□ 1.28
GRIA4-203ENST00000393127 CANXP27824 592 aaKnown RBP22.97■■□□□ 1.27
GRIA4-203ENST00000393127 ANP32AP39687 249 aaKnown RBP22.93■■□□□ 1.26
GRIA4-203ENST00000393127 BCL11AQ9H165 835 aa22.9■■□□□ 1.26
GRIA4-203ENST00000393127 NPM2Q86SE8 214 aaKnown RBP22.85■■□□□ 1.25
GRIA4-203ENST00000393127 SLC24A1O60721 1099 aa22.76■■□□□ 1.23
GRIA4-203ENST00000393127 PABPN1Q86U42 306 aaKnown RBP eCLIP22.76■■□□□ 1.23
GRIA4-203ENST00000393127 FKBP8Q14318 412 aa22.74■■□□□ 1.23
GRIA4-203ENST00000393127 NEFMP07197 916 aa22.68■■□□□ 1.22
GRIA4-203ENST00000393127 EIF5BO60841 1220 aaKnown RBP22.67■■□□□ 1.22
GRIA4-203ENST00000393127 P3H3Q8IVL6 736 aa22.66■■□□□ 1.22
GRIA4-203ENST00000393127 ARID3CA6NKF2 412 aa22.61■■□□□ 1.21
GRIA4-203ENST00000393127 FBLN2P98095 1184 aa22.6■■□□□ 1.21
GRIA4-203ENST00000393127 ABCC9O60706 1549 aa22.57■■□□□ 1.2
GRIA4-203ENST00000393127 ANP32BQ92688 251 aaKnown RBP22.56■■□□□ 1.2
GRIA4-203ENST00000393127 CSRNP3Q8WYN3 585 aa22.55■■□□□ 1.2
GRIA4-203ENST00000393127 HNRNPUQ00839 825 aaKnown RBP eCLIP22.54■■□□□ 1.2
GRIA4-203ENST00000393127 ZNF777Q9ULD5 760 aaPredicted RBP22.51■■□□□ 1.19
GRIA4-203ENST00000393127 HSP90AA1P07900 732 aaKnown RBP22.49■■□□□ 1.19
GRIA4-203ENST00000393127 FAM9BQ8IZU0 186 aa22.49■■□□□ 1.19
GRIA4-203ENST00000393127 TONSLQ96HA7 1378 aa22.49■■□□□ 1.19
GRIA4-203ENST00000393127 DDX10Q13206 875 aaKnown RBP22.46■■□□□ 1.19
GRIA4-203ENST00000393127 NBR1Q14596 966 aa22.45■■□□□ 1.18
GRIA4-203ENST00000393127 UPF2Q9HAU5 1272 aaKnown RBP22.44■■□□□ 1.18
GRIA4-203ENST00000393127 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.18
GRIA4-203ENST00000393127 SALL2Q9Y467 1007 aaPredicted RBP22.37■■□□□ 1.17
GRIA4-203ENST00000393127 CCDC136Q96JN2 1154 aa22.35■■□□□ 1.17
GRIA4-203ENST00000393127 GLIPR1L2Q4G1C9 344 aa22.34■■□□□ 1.17
GRIA4-203ENST00000393127 SCAF1Q9H7N4 1312 aaKnown RBP22.33■■□□□ 1.17
GRIA4-203ENST00000393127 ARXQ96QS3 562 aa22.29■■□□□ 1.16
GRIA4-203ENST00000393127 TMC1Q8TDI8 760 aa22.24■■□□□ 1.15
GRIA4-203ENST00000393127 IRX6P78412 446 aaPredicted RBP22.23■■□□□ 1.15
GRIA4-203ENST00000393127 CHGAP10645 457 aaKnown RBP22.22■■□□□ 1.15
GRIA4-203ENST00000393127 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.22■■□□□ 1.15
GRIA4-203ENST00000393127 MIER1Q8N108 512 aa22.21■■□□□ 1.15
GRIA4-203ENST00000393127 MRS2Q9HD23 443 aa22.18■■□□□ 1.14
GRIA4-203ENST00000393127 WDR43Q15061 677 aaKnown RBP eCLIP22.15■■□□□ 1.14
GRIA4-203ENST00000393127 CHIC2Q9UKJ5 165 aa22.15■■□□□ 1.14
GRIA4-203ENST00000393127 STAG3Q9UJ98 1225 aa22.1■■□□□ 1.13
GRIA4-203ENST00000393127 HIRIP3Q9BW71 556 aaPredicted RBP22.07■■□□□ 1.12
GRIA4-203ENST00000393127 ESF1Q9H501 851 aaKnown RBP22.05■■□□□ 1.12
GRIA4-203ENST00000393127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.04■■□□□ 1.12
GRIA4-203ENST00000393127 KDM2AQ9Y2K7 1162 aa22.03■■□□□ 1.12
GRIA4-203ENST00000393127 SCRIBQ14160 1630 aa22.02■■□□□ 1.12
GRIA4-203ENST00000393127 DDRGK1Q96HY6 314 aa21.99■■□□□ 1.11
GRIA4-203ENST00000393127 MYH16Q9H6N6 1097 aa21.94■■□□□ 1.1
GRIA4-203ENST00000393127 BECN1Q14457 450 aa21.93■■□□□ 1.1
GRIA4-203ENST00000393127 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
GRIA4-203ENST00000393127 EIF4G2P78344 907 aaKnown RBP eCLIP21.91■■□□□ 1.1
GRIA4-203ENST00000393127 ANP32EQ9BTT0 268 aa21.91■■□□□ 1.1
GRIA4-203ENST00000393127 TRIM44Q96DX7 344 aaPredicted RBP21.88■■□□□ 1.09
GRIA4-203ENST00000393127 MTUS2Q5JR59 1369 aa21.87■■□□□ 1.09
GRIA4-203ENST00000393127 CLIP1P30622 1438 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms