RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 NISCHQ9Y2I1 1504 aa33.35■■■□□ 2.93
CTSB-202ENST00000353047 SHROOM4Q9ULL8 1493 aa31.39■■■□□ 2.61
CTSB-202ENST00000353047 SUPT5HO00267 1087 aaKnown RBP31.3■■■□□ 2.6
CTSB-202ENST00000353047 DCAF8L2P0C7V8 631 aa31.07■■■□□ 2.56
CTSB-202ENST00000353047 PCGF6Q9BYE7 350 aa30.1■■■□□ 2.41
CTSB-202ENST00000353047 EHMT2Q96KQ7 1210 aa29.91■■■□□ 2.38
CTSB-202ENST00000353047 PPARGC1BQ86YN6 1023 aaKnown RBP29.66■■■□□ 2.34
CTSB-202ENST00000353047 HRCP23327 699 aa29.43■■■□□ 2.3
CTSB-202ENST00000353047 LOC105371045A0A1W2PR82 267 aa29.38■■■□□ 2.29
CTSB-202ENST00000353047 CHIC1Q5VXU3 224 aa29.37■■■□□ 2.29
CTSB-202ENST00000353047 FAM9AQ8IZU1 332 aaPredicted RBP29.32■■■□□ 2.28
CTSB-202ENST00000353047 TTBK1Q5TCY1 1321 aaPredicted RBP28.91■■■□□ 2.22
CTSB-202ENST00000353047 MYO15BQ96JP2 1530 aa28.8■■■□□ 2.2
CTSB-202ENST00000353047 TRIM41Q8WV44 630 aa28.56■■■□□ 2.16
CTSB-202ENST00000353047 TRIM26Q12899 539 aaPredicted RBP28.5■■■□□ 2.15
CTSB-202ENST00000353047 CCER1Q8TC90 406 aaPredicted RBP28.16■■■□□ 2.1
CTSB-202ENST00000353047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.08■■■□□ 2.09
CTSB-202ENST00000353047 ZCCHC6Q5VYS8 1495 aaKnown RBP28.01■■■□□ 2.07
CTSB-202ENST00000353047 ZEB1P37275 1124 aaPredicted RBP28■■■□□ 2.07
CTSB-202ENST00000353047 RANGAP1P46060 587 aaPredicted RBP27.95■■■□□ 2.06
CTSB-202ENST00000353047 YTHDC1Q96MU7 727 aaKnown RBP27.95■■■□□ 2.06
CTSB-202ENST00000353047 SCAF1Q9H7N4 1312 aaKnown RBP27.7■■■□□ 2.02
CTSB-202ENST00000353047 DCAF1Q9Y4B6 1507 aa27.63■■■□□ 2.01
CTSB-202ENST00000353047 UBTFP17480 764 aaKnown RBP27.59■■■□□ 2.01
CTSB-202ENST00000353047 CENPBP07199 599 aaPredicted RBP27.51■■■□□ 2
CTSB-202ENST00000353047 PELP1Q8IZL8 1130 aaKnown RBP27.49■■□□□ 1.99
CTSB-202ENST00000353047 DIEXFQ68CQ4 756 aaKnown RBP27.47■■□□□ 1.99
CTSB-202ENST00000353047 GTF3C3Q9Y5Q9 886 aa27.47■■□□□ 1.99
CTSB-202ENST00000353047 HNRNPUL2Q1KMD3 747 aaKnown RBP27.42■■□□□ 1.98
CTSB-202ENST00000353047 NEUROD1Q13562 356 aa27.38■■□□□ 1.97
CTSB-202ENST00000353047 ACIN1Q9UKV3 1341 aaKnown RBP27.24■■□□□ 1.95
CTSB-202ENST00000353047 APLP2Q06481 763 aa27.22■■□□□ 1.95
CTSB-202ENST00000353047 SCRIBQ14160 1630 aa27.13■■□□□ 1.93
CTSB-202ENST00000353047 ABCC9O60706 1549 aa27.06■■□□□ 1.92
CTSB-202ENST00000353047 RSF1Q96T23 1441 aaPredicted RBP27.04■■□□□ 1.92
CTSB-202ENST00000353047 CCDC180Q9P1Z9 1646 aa26.97■■□□□ 1.91
CTSB-202ENST00000353047 ITGAEP38570 1179 aa26.96■■□□□ 1.91
CTSB-202ENST00000353047 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
CTSB-202ENST00000353047 ZNF316A6NFI3 1004 aaPredicted RBP26.79■■□□□ 1.88
CTSB-202ENST00000353047 RB1CC1Q8TDY2 1594 aa26.73■■□□□ 1.87
CTSB-202ENST00000353047 MIER1Q8N108 512 aa26.72■■□□□ 1.87
CTSB-202ENST00000353047 ATP1B4Q9UN42 357 aaPredicted RBP26.71■■□□□ 1.87
CTSB-202ENST00000353047 CECR2Q9BXF3 1484 aa26.68■■□□□ 1.86
CTSB-202ENST00000353047 CSRNP3Q8WYN3 585 aa26.61■■□□□ 1.85
CTSB-202ENST00000353047 BCANQ96GW7 911 aa26.6■■□□□ 1.85
CTSB-202ENST00000353047 CEP162Q5TB80 1403 aa26.36■■□□□ 1.81
CTSB-202ENST00000353047 SOGA1O94964 1423 aa26.33■■□□□ 1.81
CTSB-202ENST00000353047 MROH2BQ7Z745 1585 aa26.31■■□□□ 1.8
CTSB-202ENST00000353047 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
CTSB-202ENST00000353047 CNGB1Q14028 1251 aaPredicted RBP26.21■■□□□ 1.79
CTSB-202ENST00000353047 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
CTSB-202ENST00000353047 HIRIP3Q9BW71 556 aaPredicted RBP26.18■■□□□ 1.78
CTSB-202ENST00000353047 MYT1Q01538 1121 aa26.14■■□□□ 1.78
CTSB-202ENST00000353047 WIZO95785 1651 aa26.09■■□□□ 1.77
CTSB-202ENST00000353047 FAM50AQ14320 339 aaKnown RBP26.08■■□□□ 1.77
CTSB-202ENST00000353047 RUSC2Q8N2Y8 1516 aa26.06■■□□□ 1.76
CTSB-202ENST00000353047 P3H3Q8IVL6 736 aa26.06■■□□□ 1.76
CTSB-202ENST00000353047 NEFLP07196 543 aa26.04■■□□□ 1.76
CTSB-202ENST00000353047 DDX10Q13206 875 aaKnown RBP25.98■■□□□ 1.75
CTSB-202ENST00000353047 CLIP1P30622 1438 aa25.95■■□□□ 1.74
CTSB-202ENST00000353047 TNIKQ9UKE5 1360 aa25.94■■□□□ 1.74
CTSB-202ENST00000353047 TRIM52Q96A61 297 aa25.92■■□□□ 1.74
CTSB-202ENST00000353047 FKBP8Q14318 412 aa25.92■■□□□ 1.74
CTSB-202ENST00000353047 KCNH8Q96L42 1107 aa25.88■■□□□ 1.73
CTSB-202ENST00000353047 SUPT16HQ9Y5B9 1047 aaKnown RBP25.83■■□□□ 1.73
CTSB-202ENST00000353047 ERICH6Q7L0X2 663 aa25.82■■□□□ 1.72
CTSB-202ENST00000353047 KANK4Q5T7N3 995 aaPredicted RBP25.79■■□□□ 1.72
CTSB-202ENST00000353047 POLR3GLQ9BT43 218 aa25.76■■□□□ 1.71
CTSB-202ENST00000353047 GOLGA3Q08378 1498 aa25.76■■□□□ 1.71
CTSB-202ENST00000353047 IRX6P78412 446 aaPredicted RBP25.75■■□□□ 1.71
CTSB-202ENST00000353047 WRNQ14191 1432 aaPredicted RBP eCLIP25.74■■□□□ 1.71
CTSB-202ENST00000353047 SIN3AQ96ST3 1273 aa25.71■■□□□ 1.71
CTSB-202ENST00000353047 ARID3CA6NKF2 412 aa25.64■■□□□ 1.7
CTSB-202ENST00000353047 SENP3-EIF4A1A0A087X0R7 540 aa25.63■■□□□ 1.69
CTSB-202ENST00000353047 BAZ1AQ9NRL2 1556 aaPredicted RBP25.58■■□□□ 1.69
CTSB-202ENST00000353047 ANP32CO43423 234 aa25.57■■□□□ 1.68
CTSB-202ENST00000353047 NACADO15069 1562 aa25.52■■□□□ 1.68
CTSB-202ENST00000353047 TSHZ2Q9NRE2 1034 aa25.5■■□□□ 1.67
CTSB-202ENST00000353047 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
CTSB-202ENST00000353047 EEA1Q15075 1411 aa25.47■■□□□ 1.67
CTSB-202ENST00000353047 RAPGEF2Q9Y4G8 1499 aa25.45■■□□□ 1.66
CTSB-202ENST00000353047 HNRNPUQ00839 825 aaKnown RBP eCLIP25.44■■□□□ 1.66
CTSB-202ENST00000353047 VPS8Q8N3P4 1428 aa25.43■■□□□ 1.66
CTSB-202ENST00000353047 CHIC2Q9UKJ5 165 aa25.36■■□□□ 1.65
CTSB-202ENST00000353047 DHX57Q6P158 1386 aaKnown RBP25.35■■□□□ 1.65
CTSB-202ENST00000353047 ANP32EQ9BTT0 268 aa25.35■■□□□ 1.65
CTSB-202ENST00000353047 ZNF326Q5BKZ1 582 aaKnown RBP25.33■■□□□ 1.64
CTSB-202ENST00000353047 FAM9BQ8IZU0 186 aa25.31■■□□□ 1.64
CTSB-202ENST00000353047 TOP2AP11388 1531 aaKnown RBP25.29■■□□□ 1.64
CTSB-202ENST00000353047 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
CTSB-202ENST00000353047 CDK11AQ9UQ88 783 aaPredicted RBP25.22■■□□□ 1.63
CTSB-202ENST00000353047 CCNB3Q8WWL7 1395 aa25.22■■□□□ 1.63
CTSB-202ENST00000353047 TONSLQ96HA7 1378 aa25.2■■□□□ 1.62
CTSB-202ENST00000353047 RBM19Q9Y4C8 960 aaKnown RBP25.17■■□□□ 1.62
CTSB-202ENST00000353047 RAB3GAP2Q9H2M9 1393 aa25.17■■□□□ 1.62
CTSB-202ENST00000353047 BAZ1BQ9UIG0 1483 aaKnown RBP25.15■■□□□ 1.62
CTSB-202ENST00000353047 RRP7BPQ9NSQ0 103 aa25.15■■□□□ 1.62
CTSB-202ENST00000353047 CLSPNQ9HAW4 1339 aa25.13■■□□□ 1.61
CTSB-202ENST00000353047 SMARCA4P51532 1647 aa25.12■■□□□ 1.61
CTSB-202ENST00000353047 NBR1Q14596 966 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms