Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.34■■□□□ 1.17
CDH6P55285 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.34■■□□□ 1.17
CDH6P55285 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.34■■□□□ 1.17
CDH6P55285 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.34■■□□□ 1.17
CDH6P55285 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.34■■□□□ 1.17
CDH6P55285 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDH6P55285 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.34■■□□□ 1.17
CDH6P55285 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.33■■□□□ 1.17
CDH6P55285 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDH6P55285 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDH6P55285 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CDH6P55285 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDH6P55285 EDA-201ENST00000338901 1233 ntBASIC22.33■■□□□ 1.17
CDH6P55285 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.17
CDH6P55285 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.33■■□□□ 1.17
CDH6P55285 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDH6P55285 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDH6P55285 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.33■■□□□ 1.17
CDH6P55285 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDH6P55285 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.33■■□□□ 1.16
CDH6P55285 AC026471.6-201ENST00000622954 1905 ntBASIC22.33■■□□□ 1.16
CDH6P55285 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDH6P55285 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDH6P55285 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDH6P55285 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDH6P55285 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDH6P55285 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDH6P55285 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDH6P55285 AC099791.1-201ENST00000416440 715 ntBASIC22.32■■□□□ 1.16
CDH6P55285 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.32■■□□□ 1.16
CDH6P55285 AC133561.4-201ENST00000566112 224 ntBASIC22.32■■□□□ 1.16
CDH6P55285 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.32■■□□□ 1.16
CDH6P55285 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDH6P55285 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDH6P55285 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDH6P55285 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDH6P55285 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.31■■□□□ 1.16
CDH6P55285 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
CDH6P55285 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDH6P55285 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.31■■□□□ 1.16
CDH6P55285 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDH6P55285 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.31■■□□□ 1.16
CDH6P55285 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDH6P55285 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.31■■□□□ 1.16
CDH6P55285 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.31■■□□□ 1.16
CDH6P55285 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.31■■□□□ 1.16
CDH6P55285 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDH6P55285 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDH6P55285 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.31■■□□□ 1.16
CDH6P55285 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
CDH6P55285 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.31■■□□□ 1.16
CDH6P55285 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDH6P55285 AC007375.3-201ENST00000600936 2314 ntBASIC22.3■■□□□ 1.16
CDH6P55285 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDH6P55285 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.3■■□□□ 1.16
CDH6P55285 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDH6P55285 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.3■■□□□ 1.16
CDH6P55285 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDH6P55285 IGHV3-19-201ENST00000521488 291 ntBASIC22.3■■□□□ 1.16
CDH6P55285 AC027682.1-201ENST00000562846 899 ntBASIC22.3■■□□□ 1.16
CDH6P55285 AL355001.2-201ENST00000620617 1191 ntBASIC22.3■■□□□ 1.16
CDH6P55285 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDH6P55285 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDH6P55285 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDH6P55285 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
CDH6P55285 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.3■■□□□ 1.16
CDH6P55285 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDH6P55285 AP004607.7-201ENST00000527152 1677 ntBASIC22.3■■□□□ 1.16
CDH6P55285 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
CDH6P55285 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDH6P55285 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDH6P55285 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDH6P55285 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.29■■□□□ 1.16
CDH6P55285 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDH6P55285 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.29■■□□□ 1.16
CDH6P55285 AP001330.3-201ENST00000520123 633 ntBASIC22.29■■□□□ 1.16
CDH6P55285 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.29■■□□□ 1.16
CDH6P55285 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.29■■□□□ 1.16
CDH6P55285 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.29■■□□□ 1.16
CDH6P55285 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDH6P55285 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDH6P55285 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDH6P55285 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDH6P55285 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH6P55285 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.28■■□□□ 1.16
CDH6P55285 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDH6P55285 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH6P55285 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDH6P55285 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.28■■□□□ 1.16
CDH6P55285 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CDH6P55285 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.28■■□□□ 1.16
CDH6P55285 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH6P55285 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH6P55285 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH6P55285 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CDH6P55285 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH6P55285 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDH6P55285 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDH6P55285 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.27■■□□□ 1.16
CDH6P55285 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms