Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
KCNMB3Q9NPA1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
KCNMB3Q9NPA1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
KCNMB3Q9NPA1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
KCNMB3Q9NPA1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.76■■■□□ 2.51
KCNMB3Q9NPA1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
KCNMB3Q9NPA1 SUZ12P1-203ENST00000578195 985 ntBASIC30.75■■■□□ 2.51
KCNMB3Q9NPA1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
KCNMB3Q9NPA1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
KCNMB3Q9NPA1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
KCNMB3Q9NPA1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
KCNMB3Q9NPA1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
KCNMB3Q9NPA1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
KCNMB3Q9NPA1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.71■■■□□ 2.51
KCNMB3Q9NPA1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
KCNMB3Q9NPA1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
KCNMB3Q9NPA1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.69■■■□□ 2.5
KCNMB3Q9NPA1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
KCNMB3Q9NPA1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.68■■■□□ 2.5
KCNMB3Q9NPA1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
KCNMB3Q9NPA1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
KCNMB3Q9NPA1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
KCNMB3Q9NPA1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
KCNMB3Q9NPA1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
KCNMB3Q9NPA1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
KCNMB3Q9NPA1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
KCNMB3Q9NPA1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
KCNMB3Q9NPA1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
KCNMB3Q9NPA1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
KCNMB3Q9NPA1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
KCNMB3Q9NPA1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
KCNMB3Q9NPA1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.63■■■□□ 2.49
KCNMB3Q9NPA1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
KCNMB3Q9NPA1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
KCNMB3Q9NPA1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.57■■■□□ 2.48
KCNMB3Q9NPA1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.57■■■□□ 2.48
KCNMB3Q9NPA1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
KCNMB3Q9NPA1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
KCNMB3Q9NPA1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.54■■■□□ 2.48
KCNMB3Q9NPA1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
KCNMB3Q9NPA1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
KCNMB3Q9NPA1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
KCNMB3Q9NPA1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
KCNMB3Q9NPA1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
KCNMB3Q9NPA1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
KCNMB3Q9NPA1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
KCNMB3Q9NPA1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.48■■■□□ 2.47
KCNMB3Q9NPA1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
KCNMB3Q9NPA1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
KCNMB3Q9NPA1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.47■■■□□ 2.47
KCNMB3Q9NPA1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
KCNMB3Q9NPA1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.42■■■□□ 2.46
KCNMB3Q9NPA1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
KCNMB3Q9NPA1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
KCNMB3Q9NPA1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
KCNMB3Q9NPA1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
KCNMB3Q9NPA1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
KCNMB3Q9NPA1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.39■■■□□ 2.46
KCNMB3Q9NPA1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.45
KCNMB3Q9NPA1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
KCNMB3Q9NPA1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
KCNMB3Q9NPA1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
KCNMB3Q9NPA1 AL161658.1-201ENST00000623641 1967 ntBASIC30.37■■■□□ 2.45
KCNMB3Q9NPA1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
KCNMB3Q9NPA1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
KCNMB3Q9NPA1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
KCNMB3Q9NPA1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
KCNMB3Q9NPA1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.34■■■□□ 2.45
KCNMB3Q9NPA1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
KCNMB3Q9NPA1 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.34■■■□□ 2.45
KCNMB3Q9NPA1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
KCNMB3Q9NPA1 MIR762-201ENST00000390236 83 ntBASIC30.33■■■□□ 2.45
KCNMB3Q9NPA1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
KCNMB3Q9NPA1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
KCNMB3Q9NPA1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.32■■■□□ 2.44
KCNMB3Q9NPA1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
KCNMB3Q9NPA1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
KCNMB3Q9NPA1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
KCNMB3Q9NPA1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.3■■■□□ 2.44
KCNMB3Q9NPA1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.29■■■□□ 2.44
KCNMB3Q9NPA1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.29■■■□□ 2.44
KCNMB3Q9NPA1 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.29■■■□□ 2.44
KCNMB3Q9NPA1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
KCNMB3Q9NPA1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
KCNMB3Q9NPA1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.29■■■□□ 2.44
KCNMB3Q9NPA1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
KCNMB3Q9NPA1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
KCNMB3Q9NPA1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
KCNMB3Q9NPA1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.27■■■□□ 2.44
KCNMB3Q9NPA1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
KCNMB3Q9NPA1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.26■■■□□ 2.43
KCNMB3Q9NPA1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
KCNMB3Q9NPA1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
KCNMB3Q9NPA1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
KCNMB3Q9NPA1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
KCNMB3Q9NPA1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.24■■■□□ 2.43
KCNMB3Q9NPA1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
KCNMB3Q9NPA1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
KCNMB3Q9NPA1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
KCNMB3Q9NPA1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms