Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32.18■■■□□ 2.74
RNF41Q9H4P4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
RNF41Q9H4P4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
RNF41Q9H4P4 SUZ12P1-203ENST00000578195 985 ntBASIC32.16■■■□□ 2.74
RNF41Q9H4P4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
RNF41Q9H4P4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
RNF41Q9H4P4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
RNF41Q9H4P4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
RNF41Q9H4P4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.15■■■□□ 2.74
RNF41Q9H4P4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RNF41Q9H4P4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.14■■■□□ 2.74
RNF41Q9H4P4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
RNF41Q9H4P4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.13■■■□□ 2.73
RNF41Q9H4P4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
RNF41Q9H4P4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
RNF41Q9H4P4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.11■■■□□ 2.73
RNF41Q9H4P4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RNF41Q9H4P4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
RNF41Q9H4P4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
RNF41Q9H4P4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.09■■■□□ 2.73
RNF41Q9H4P4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RNF41Q9H4P4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.09■■■□□ 2.73
RNF41Q9H4P4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
RNF41Q9H4P4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
RNF41Q9H4P4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
RNF41Q9H4P4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
RNF41Q9H4P4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
RNF41Q9H4P4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
RNF41Q9H4P4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
RNF41Q9H4P4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.02■■■□□ 2.72
RNF41Q9H4P4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
RNF41Q9H4P4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
RNF41Q9H4P4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32■■■□□ 2.71
RNF41Q9H4P4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
RNF41Q9H4P4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
RNF41Q9H4P4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
RNF41Q9H4P4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
RNF41Q9H4P4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
RNF41Q9H4P4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
RNF41Q9H4P4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.93■■■□□ 2.7
RNF41Q9H4P4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
RNF41Q9H4P4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RNF41Q9H4P4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
RNF41Q9H4P4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
RNF41Q9H4P4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
RNF41Q9H4P4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
RNF41Q9H4P4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
RNF41Q9H4P4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
RNF41Q9H4P4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
RNF41Q9H4P4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.88■■■□□ 2.69
RNF41Q9H4P4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
RNF41Q9H4P4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
RNF41Q9H4P4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
RNF41Q9H4P4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
RNF41Q9H4P4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
RNF41Q9H4P4 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.83■■■□□ 2.69
RNF41Q9H4P4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
RNF41Q9H4P4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.81■■■□□ 2.68
RNF41Q9H4P4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RNF41Q9H4P4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.81■■■□□ 2.68
RNF41Q9H4P4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
RNF41Q9H4P4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.79■■■□□ 2.68
RNF41Q9H4P4 MIR762-201ENST00000390236 83 ntBASIC31.78■■■□□ 2.68
RNF41Q9H4P4 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.78■■■□□ 2.68
RNF41Q9H4P4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
RNF41Q9H4P4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
RNF41Q9H4P4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RNF41Q9H4P4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RNF41Q9H4P4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RNF41Q9H4P4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
RNF41Q9H4P4 AL161658.1-201ENST00000623641 1967 ntBASIC31.73■■■□□ 2.67
RNF41Q9H4P4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
RNF41Q9H4P4 AP006261.1-201ENST00000584783 668 ntBASIC31.72■■■□□ 2.67
RNF41Q9H4P4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.72■■■□□ 2.67
RNF41Q9H4P4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
RNF41Q9H4P4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.7■■■□□ 2.67
RNF41Q9H4P4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
RNF41Q9H4P4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
RNF41Q9H4P4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.7■■■□□ 2.66
RNF41Q9H4P4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
RNF41Q9H4P4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.69■■■□□ 2.66
RNF41Q9H4P4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
RNF41Q9H4P4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
RNF41Q9H4P4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RNF41Q9H4P4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RNF41Q9H4P4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.67■■■□□ 2.66
RNF41Q9H4P4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RNF41Q9H4P4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
RNF41Q9H4P4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
RNF41Q9H4P4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RNF41Q9H4P4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
RNF41Q9H4P4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.65■■■□□ 2.66
RNF41Q9H4P4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.65■■■□□ 2.66
RNF41Q9H4P4 AC005559.1-201ENST00000589661 871 ntBASIC31.64■■■□□ 2.66
RNF41Q9H4P4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
RNF41Q9H4P4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
RNF41Q9H4P4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
RNF41Q9H4P4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.63■■■□□ 2.65
RNF41Q9H4P4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
RNF41Q9H4P4 MIR3665-201ENST00000578708 105 ntBASIC31.62■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms