Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC33.18■■■□□ 2.9
RPAP1Q9BWH6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC33.18■■■□□ 2.9
RPAP1Q9BWH6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC33.17■■■□□ 2.9
RPAP1Q9BWH6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
RPAP1Q9BWH6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
RPAP1Q9BWH6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC33.16■■■□□ 2.9
RPAP1Q9BWH6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
RPAP1Q9BWH6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
RPAP1Q9BWH6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC33.15■■■□□ 2.9
RPAP1Q9BWH6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
RPAP1Q9BWH6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC33.14■■■□□ 2.9
RPAP1Q9BWH6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
RPAP1Q9BWH6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.13■■■□□ 2.89
RPAP1Q9BWH6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
RPAP1Q9BWH6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
RPAP1Q9BWH6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
RPAP1Q9BWH6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC33.1■■■□□ 2.89
RPAP1Q9BWH6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
RPAP1Q9BWH6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
RPAP1Q9BWH6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
RPAP1Q9BWH6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
RPAP1Q9BWH6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC33.06■■■□□ 2.88
RPAP1Q9BWH6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
RPAP1Q9BWH6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC33.05■■■□□ 2.88
RPAP1Q9BWH6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
RPAP1Q9BWH6 MIR3665-201ENST00000578708 105 ntBASIC33.03■■■□□ 2.88
RPAP1Q9BWH6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC33.03■■■□□ 2.88
RPAP1Q9BWH6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC33.03■■■□□ 2.88
RPAP1Q9BWH6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RPAP1Q9BWH6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC33.02■■■□□ 2.88
RPAP1Q9BWH6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC33.02■■■□□ 2.88
RPAP1Q9BWH6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
RPAP1Q9BWH6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
RPAP1Q9BWH6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC33■■■□□ 2.87
RPAP1Q9BWH6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
RPAP1Q9BWH6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RPAP1Q9BWH6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
RPAP1Q9BWH6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.96■■■□□ 2.87
RPAP1Q9BWH6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
RPAP1Q9BWH6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.96■■■□□ 2.87
RPAP1Q9BWH6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.95■■■□□ 2.86
RPAP1Q9BWH6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
RPAP1Q9BWH6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC32.95■■■□□ 2.86
RPAP1Q9BWH6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.86
RPAP1Q9BWH6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC32.95■■■□□ 2.86
RPAP1Q9BWH6 DUX4L28-201ENST00000623687 678 ntBASIC32.95■■■□□ 2.86
RPAP1Q9BWH6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
RPAP1Q9BWH6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
RPAP1Q9BWH6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
RPAP1Q9BWH6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.93■■■□□ 2.86
RPAP1Q9BWH6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
RPAP1Q9BWH6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
RPAP1Q9BWH6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.91■■■□□ 2.86
RPAP1Q9BWH6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RPAP1Q9BWH6 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.9■■■□□ 2.86
RPAP1Q9BWH6 AC087741.3-201ENST00000624270 1347 ntBASIC32.9■■■□□ 2.86
RPAP1Q9BWH6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
RPAP1Q9BWH6 MIR762-201ENST00000390236 83 ntBASIC32.87■■■□□ 2.85
RPAP1Q9BWH6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.86■■■□□ 2.85
RPAP1Q9BWH6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32.85■■■□□ 2.85
RPAP1Q9BWH6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RPAP1Q9BWH6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
RPAP1Q9BWH6 AC120057.4-201ENST00000624722 1615 ntBASIC32.84■■■□□ 2.85
RPAP1Q9BWH6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.83■■■□□ 2.85
RPAP1Q9BWH6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.82■■■□□ 2.84
RPAP1Q9BWH6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.81■■■□□ 2.84
RPAP1Q9BWH6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
RPAP1Q9BWH6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
RPAP1Q9BWH6 AC005559.1-201ENST00000589661 871 ntBASIC32.79■■■□□ 2.84
RPAP1Q9BWH6 AC044849.2-201ENST00000606596 710 ntBASIC32.79■■■□□ 2.84
RPAP1Q9BWH6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.78■■■□□ 2.84
RPAP1Q9BWH6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
RPAP1Q9BWH6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
RPAP1Q9BWH6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
RPAP1Q9BWH6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
RPAP1Q9BWH6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
RPAP1Q9BWH6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RPAP1Q9BWH6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RPAP1Q9BWH6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.74■■■□□ 2.83
RPAP1Q9BWH6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.74■■■□□ 2.83
RPAP1Q9BWH6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RPAP1Q9BWH6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.73■■■□□ 2.83
RPAP1Q9BWH6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.73■■■□□ 2.83
RPAP1Q9BWH6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
RPAP1Q9BWH6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
RPAP1Q9BWH6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC32.72■■■□□ 2.83
RPAP1Q9BWH6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
RPAP1Q9BWH6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
RPAP1Q9BWH6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
RPAP1Q9BWH6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
RPAP1Q9BWH6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
RPAP1Q9BWH6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.7■■■□□ 2.82
RPAP1Q9BWH6 WASH5P-204ENST00000632292 975 ntBASIC32.69■■■□□ 2.82
RPAP1Q9BWH6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC32.68■■■□□ 2.82
RPAP1Q9BWH6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
RPAP1Q9BWH6 ABHD17AP4-201ENST00000411545 909 ntBASIC32.68■■■□□ 2.82
RPAP1Q9BWH6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
RPAP1Q9BWH6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
RPAP1Q9BWH6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
RPAP1Q9BWH6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.66■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms