Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
RDH13Q8NBN7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.7■■■□□ 2.35
RDH13Q8NBN7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RDH13Q8NBN7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RDH13Q8NBN7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RDH13Q8NBN7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.65■■■□□ 2.34
RDH13Q8NBN7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.65■■■□□ 2.34
RDH13Q8NBN7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
RDH13Q8NBN7 AC097358.2-201ENST00000607541 1159 ntBASIC29.64■■■□□ 2.34
RDH13Q8NBN7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RDH13Q8NBN7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
RDH13Q8NBN7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
RDH13Q8NBN7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RDH13Q8NBN7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.62■■■□□ 2.33
RDH13Q8NBN7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RDH13Q8NBN7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
RDH13Q8NBN7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RDH13Q8NBN7 AC136428.2-201ENST00000563187 214 ntBASIC29.61■■■□□ 2.33
RDH13Q8NBN7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RDH13Q8NBN7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.6■■■□□ 2.33
RDH13Q8NBN7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
RDH13Q8NBN7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RDH13Q8NBN7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.59■■■□□ 2.33
RDH13Q8NBN7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.59■■■□□ 2.33
RDH13Q8NBN7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.58■■■□□ 2.33
RDH13Q8NBN7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RDH13Q8NBN7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
RDH13Q8NBN7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RDH13Q8NBN7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.55■■■□□ 2.32
RDH13Q8NBN7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.55■■■□□ 2.32
RDH13Q8NBN7 WASH5P-204ENST00000632292 975 ntBASIC29.55■■■□□ 2.32
RDH13Q8NBN7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
RDH13Q8NBN7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RDH13Q8NBN7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.51■■■□□ 2.31
RDH13Q8NBN7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.5■■■□□ 2.31
RDH13Q8NBN7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RDH13Q8NBN7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.5■■■□□ 2.31
RDH13Q8NBN7 CAHM-201ENST00000604200 896 ntBASIC29.48■■■□□ 2.31
RDH13Q8NBN7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RDH13Q8NBN7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RDH13Q8NBN7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RDH13Q8NBN7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.45■■■□□ 2.31
RDH13Q8NBN7 AL161658.1-201ENST00000623641 1967 ntBASIC29.43■■■□□ 2.3
RDH13Q8NBN7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.43■■■□□ 2.3
RDH13Q8NBN7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.42■■■□□ 2.3
RDH13Q8NBN7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.42■■■□□ 2.3
RDH13Q8NBN7 AL391121.1-201ENST00000607967 1349 ntBASIC29.42■■■□□ 2.3
RDH13Q8NBN7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RDH13Q8NBN7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RDH13Q8NBN7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RDH13Q8NBN7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
RDH13Q8NBN7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RDH13Q8NBN7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.4■■■□□ 2.3
RDH13Q8NBN7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RDH13Q8NBN7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RDH13Q8NBN7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RDH13Q8NBN7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RDH13Q8NBN7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.38■■■□□ 2.29
RDH13Q8NBN7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RDH13Q8NBN7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RDH13Q8NBN7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.37■■■□□ 2.29
RDH13Q8NBN7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
RDH13Q8NBN7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RDH13Q8NBN7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
RDH13Q8NBN7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RDH13Q8NBN7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RDH13Q8NBN7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RDH13Q8NBN7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.34■■■□□ 2.29
RDH13Q8NBN7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RDH13Q8NBN7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RDH13Q8NBN7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
RDH13Q8NBN7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RDH13Q8NBN7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.29■■■□□ 2.28
RDH13Q8NBN7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.29■■■□□ 2.28
RDH13Q8NBN7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
RDH13Q8NBN7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
RDH13Q8NBN7 SUZ12P1-203ENST00000578195 985 ntBASIC29.27■■■□□ 2.28
RDH13Q8NBN7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RDH13Q8NBN7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.26■■■□□ 2.27
RDH13Q8NBN7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.26■■■□□ 2.27
RDH13Q8NBN7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
RDH13Q8NBN7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
RDH13Q8NBN7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.25■■■□□ 2.27
RDH13Q8NBN7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.24■■■□□ 2.27
RDH13Q8NBN7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RDH13Q8NBN7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RDH13Q8NBN7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.23■■■□□ 2.27
RDH13Q8NBN7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
RDH13Q8NBN7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RDH13Q8NBN7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RDH13Q8NBN7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.19■■■□□ 2.26
RDH13Q8NBN7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RDH13Q8NBN7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
RDH13Q8NBN7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RDH13Q8NBN7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
RDH13Q8NBN7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
RDH13Q8NBN7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.16■■■□□ 2.26
RDH13Q8NBN7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
RDH13Q8NBN7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
RDH13Q8NBN7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms