Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL54Q6P161 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
MRPL54Q6P161 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MRPL54Q6P161 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
MRPL54Q6P161 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
MRPL54Q6P161 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPL54Q6P161 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPL54Q6P161 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.5■□□□□ 0.87
MRPL54Q6P161 AC120057.4-201ENST00000624722 1615 ntBASIC20.5■□□□□ 0.87
MRPL54Q6P161 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRPL54Q6P161 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
MRPL54Q6P161 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MRPL54Q6P161 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MRPL54Q6P161 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MRPL54Q6P161 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MRPL54Q6P161 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MRPL54Q6P161 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
MRPL54Q6P161 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
MRPL54Q6P161 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.47■□□□□ 0.87
MRPL54Q6P161 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
MRPL54Q6P161 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
MRPL54Q6P161 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MRPL54Q6P161 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MRPL54Q6P161 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MRPL54Q6P161 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPL54Q6P161 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MRPL54Q6P161 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPL54Q6P161 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MRPL54Q6P161 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MRPL54Q6P161 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL54Q6P161 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL54Q6P161 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL54Q6P161 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
MRPL54Q6P161 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL54Q6P161 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
MRPL54Q6P161 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL54Q6P161 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.37■□□□□ 0.85
MRPL54Q6P161 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL54Q6P161 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL54Q6P161 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC20.36■□□□□ 0.85
MRPL54Q6P161 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL54Q6P161 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.36■□□□□ 0.85
MRPL54Q6P161 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.36■□□□□ 0.85
MRPL54Q6P161 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL54Q6P161 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL54Q6P161 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL54Q6P161 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL54Q6P161 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
MRPL54Q6P161 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MRPL54Q6P161 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MRPL54Q6P161 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
MRPL54Q6P161 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
MRPL54Q6P161 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MRPL54Q6P161 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.31■□□□□ 0.84
MRPL54Q6P161 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.31■□□□□ 0.84
MRPL54Q6P161 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
MRPL54Q6P161 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MRPL54Q6P161 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MRPL54Q6P161 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.3■□□□□ 0.84
MRPL54Q6P161 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL54Q6P161 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
MRPL54Q6P161 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPL54Q6P161 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPL54Q6P161 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MRPL54Q6P161 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.83
MRPL54Q6P161 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL54Q6P161 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
MRPL54Q6P161 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.25■□□□□ 0.83
MRPL54Q6P161 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.25■□□□□ 0.83
MRPL54Q6P161 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL54Q6P161 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
MRPL54Q6P161 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.24■□□□□ 0.83
MRPL54Q6P161 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL54Q6P161 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL54Q6P161 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL54Q6P161 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL54Q6P161 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL54Q6P161 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL54Q6P161 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.22■□□□□ 0.83
MRPL54Q6P161 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL54Q6P161 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL54Q6P161 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL54Q6P161 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL54Q6P161 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL54Q6P161 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.21■□□□□ 0.83
MRPL54Q6P161 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.2■□□□□ 0.82
MRPL54Q6P161 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MRPL54Q6P161 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.19■□□□□ 0.82
MRPL54Q6P161 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MRPL54Q6P161 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MRPL54Q6P161 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPL54Q6P161 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPL54Q6P161 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPL54Q6P161 AC142086.6-201ENST00000621154 1765 ntBASIC20.16■□□□□ 0.82
MRPL54Q6P161 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPL54Q6P161 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.16■□□□□ 0.82
MRPL54Q6P161 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPL54Q6P161 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MRPL54Q6P161 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MRPL54Q6P161 ST7-AS1-201ENST00000456775 1889 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms