Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HIST1H2BDP58876 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.89■□□□□ 0.94
HIST1H2BDP58876 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.89■□□□□ 0.94
HIST1H2BDP58876 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H2BDP58876 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.88■□□□□ 0.93
HIST1H2BDP58876 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H2BDP58876 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H2BDP58876 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIST1H2BDP58876 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIST1H2BDP58876 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H2BDP58876 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.85■□□□□ 0.93
HIST1H2BDP58876 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H2BDP58876 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H2BDP58876 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.85■□□□□ 0.93
HIST1H2BDP58876 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.84■□□□□ 0.93
HIST1H2BDP58876 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H2BDP58876 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H2BDP58876 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.83■□□□□ 0.93
HIST1H2BDP58876 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H2BDP58876 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.82■□□□□ 0.92
HIST1H2BDP58876 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HIST1H2BDP58876 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H2BDP58876 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H2BDP58876 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H2BDP58876 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.81■□□□□ 0.92
HIST1H2BDP58876 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HIST1H2BDP58876 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
HIST1H2BDP58876 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H2BDP58876 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H2BDP58876 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H2BDP58876 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H2BDP58876 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H2BDP58876 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.78■□□□□ 0.92
HIST1H2BDP58876 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.78■□□□□ 0.92
HIST1H2BDP58876 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HIST1H2BDP58876 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HIST1H2BDP58876 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
HIST1H2BDP58876 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.76■□□□□ 0.91
HIST1H2BDP58876 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HIST1H2BDP58876 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.75■□□□□ 0.91
HIST1H2BDP58876 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HIST1H2BDP58876 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HIST1H2BDP58876 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
HIST1H2BDP58876 AC142086.6-201ENST00000621154 1765 ntBASIC20.73■□□□□ 0.91
HIST1H2BDP58876 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HIST1H2BDP58876 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HIST1H2BDP58876 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H2BDP58876 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H2BDP58876 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H2BDP58876 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H2BDP58876 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H2BDP58876 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H2BDP58876 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.7■□□□□ 0.9
HIST1H2BDP58876 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H2BDP58876 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2BDP58876 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2BDP58876 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.69■□□□□ 0.9
HIST1H2BDP58876 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2BDP58876 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2BDP58876 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.67■□□□□ 0.9
HIST1H2BDP58876 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2BDP58876 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2BDP58876 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HIST1H2BDP58876 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
HIST1H2BDP58876 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H2BDP58876 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H2BDP58876 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.64■□□□□ 0.89
HIST1H2BDP58876 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H2BDP58876 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H2BDP58876 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H2BDP58876 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H2BDP58876 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.62■□□□□ 0.89
HIST1H2BDP58876 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H2BDP58876 AL121749.1-202ENST00000609313 2153 ntBASIC20.62■□□□□ 0.89
HIST1H2BDP58876 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.62■□□□□ 0.89
HIST1H2BDP58876 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H2BDP58876 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H2BDP58876 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H2BDP58876 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H2BDP58876 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HIST1H2BDP58876 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H2BDP58876 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H2BDP58876 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.61■□□□□ 0.89
HIST1H2BDP58876 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2BDP58876 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2BDP58876 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2BDP58876 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2BDP58876 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2BDP58876 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HIST1H2BDP58876 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
HIST1H2BDP58876 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H2BDP58876 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HIST1H2BDP58876 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H2BDP58876 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.57■□□□□ 0.88
HIST1H2BDP58876 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HIST1H2BDP58876 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H2BDP58876 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H2BDP58876 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HIST1H2BDP58876 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H2BDP58876 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms