Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CMC4P56277 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CMC4P56277 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CMC4P56277 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.22■□□□□ 0.83
CMC4P56277 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CMC4P56277 AL391121.1-201ENST00000607967 1349 ntBASIC20.22■□□□□ 0.83
CMC4P56277 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.21■□□□□ 0.83
CMC4P56277 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.21■□□□□ 0.83
CMC4P56277 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.2■□□□□ 0.82
CMC4P56277 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.2■□□□□ 0.82
CMC4P56277 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.2■□□□□ 0.82
CMC4P56277 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CMC4P56277 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.18■□□□□ 0.82
CMC4P56277 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CMC4P56277 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CMC4P56277 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.16■□□□□ 0.82
CMC4P56277 CAHM-201ENST00000604200 896 ntBASIC20.16■□□□□ 0.82
CMC4P56277 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CMC4P56277 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CMC4P56277 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CMC4P56277 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CMC4P56277 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CMC4P56277 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CMC4P56277 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CMC4P56277 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CMC4P56277 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CMC4P56277 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CMC4P56277 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
CMC4P56277 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CMC4P56277 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CMC4P56277 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CMC4P56277 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CMC4P56277 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CMC4P56277 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CMC4P56277 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CMC4P56277 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.07■□□□□ 0.8
CMC4P56277 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CMC4P56277 SUZ12P1-203ENST00000578195 985 ntBASIC20.06■□□□□ 0.8
CMC4P56277 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CMC4P56277 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.05■□□□□ 0.8
CMC4P56277 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CMC4P56277 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.05■□□□□ 0.8
CMC4P56277 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CMC4P56277 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CMC4P56277 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.04■□□□□ 0.8
CMC4P56277 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CMC4P56277 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CMC4P56277 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CMC4P56277 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CMC4P56277 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CMC4P56277 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CMC4P56277 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.01■□□□□ 0.79
CMC4P56277 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CMC4P56277 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CMC4P56277 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CMC4P56277 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20■□□□□ 0.79
CMC4P56277 HNRNPLP2-201ENST00000568980 1570 ntBASIC20■□□□□ 0.79
CMC4P56277 AP006261.1-201ENST00000584783 668 ntBASIC19.99■□□□□ 0.79
CMC4P56277 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CMC4P56277 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CMC4P56277 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
CMC4P56277 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CMC4P56277 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CMC4P56277 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CMC4P56277 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.96■□□□□ 0.79
CMC4P56277 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CMC4P56277 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CMC4P56277 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CMC4P56277 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CMC4P56277 MIR762-201ENST00000390236 83 ntBASIC19.94■□□□□ 0.78
CMC4P56277 MIR3665-201ENST00000578708 105 ntBASIC19.94■□□□□ 0.78
CMC4P56277 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CMC4P56277 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CMC4P56277 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CMC4P56277 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CMC4P56277 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
CMC4P56277 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CMC4P56277 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CMC4P56277 AC005559.1-201ENST00000589661 871 ntBASIC19.91■□□□□ 0.78
CMC4P56277 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.91■□□□□ 0.78
CMC4P56277 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.9■□□□□ 0.78
CMC4P56277 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CMC4P56277 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CMC4P56277 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CMC4P56277 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CMC4P56277 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.89■□□□□ 0.77
CMC4P56277 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.88■□□□□ 0.77
CMC4P56277 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CMC4P56277 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CMC4P56277 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CMC4P56277 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CMC4P56277 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CMC4P56277 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CMC4P56277 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CMC4P56277 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.86■□□□□ 0.77
CMC4P56277 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.86■□□□□ 0.77
CMC4P56277 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.86■□□□□ 0.77
CMC4P56277 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CMC4P56277 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CMC4P56277 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms