Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.6■□□□□ 0.73
SMIM9A6NGZ8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM9A6NGZ8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.59■□□□□ 0.73
SMIM9A6NGZ8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SMIM9A6NGZ8 CAHM-201ENST00000604200 896 ntBASIC19.59■□□□□ 0.73
SMIM9A6NGZ8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM9A6NGZ8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM9A6NGZ8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.56■□□□□ 0.72
SMIM9A6NGZ8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SMIM9A6NGZ8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM9A6NGZ8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM9A6NGZ8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM9A6NGZ8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM9A6NGZ8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM9A6NGZ8 SUZ12P1-203ENST00000578195 985 ntBASIC19.53■□□□□ 0.72
SMIM9A6NGZ8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM9A6NGZ8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMIM9A6NGZ8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMIM9A6NGZ8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
SMIM9A6NGZ8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMIM9A6NGZ8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SMIM9A6NGZ8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SMIM9A6NGZ8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SMIM9A6NGZ8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMIM9A6NGZ8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM9A6NGZ8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.49■□□□□ 0.71
SMIM9A6NGZ8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM9A6NGZ8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.49■□□□□ 0.71
SMIM9A6NGZ8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM9A6NGZ8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM9A6NGZ8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SMIM9A6NGZ8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM9A6NGZ8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM9A6NGZ8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM9A6NGZ8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM9A6NGZ8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.46■□□□□ 0.71
SMIM9A6NGZ8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
SMIM9A6NGZ8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM9A6NGZ8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.45■□□□□ 0.7
SMIM9A6NGZ8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM9A6NGZ8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SMIM9A6NGZ8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.43■□□□□ 0.7
SMIM9A6NGZ8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SMIM9A6NGZ8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM9A6NGZ8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM9A6NGZ8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM9A6NGZ8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM9A6NGZ8 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.41■□□□□ 0.7
SMIM9A6NGZ8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM9A6NGZ8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SMIM9A6NGZ8 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.4■□□□□ 0.7
SMIM9A6NGZ8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMIM9A6NGZ8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM9A6NGZ8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM9A6NGZ8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM9A6NGZ8 AP006261.1-201ENST00000584783 668 ntBASIC19.38■□□□□ 0.69
SMIM9A6NGZ8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
SMIM9A6NGZ8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SMIM9A6NGZ8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.36■□□□□ 0.69
SMIM9A6NGZ8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM9A6NGZ8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM9A6NGZ8 MIR762-201ENST00000390236 83 ntBASIC19.35■□□□□ 0.69
SMIM9A6NGZ8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SMIM9A6NGZ8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM9A6NGZ8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMIM9A6NGZ8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMIM9A6NGZ8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMIM9A6NGZ8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMIM9A6NGZ8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
SMIM9A6NGZ8 MIR3665-201ENST00000578708 105 ntBASIC19.32■□□□□ 0.68
SMIM9A6NGZ8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.32■□□□□ 0.68
SMIM9A6NGZ8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMIM9A6NGZ8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMIM9A6NGZ8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMIM9A6NGZ8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMIM9A6NGZ8 AC005559.1-201ENST00000589661 871 ntBASIC19.31■□□□□ 0.68
SMIM9A6NGZ8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.31■□□□□ 0.68
SMIM9A6NGZ8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM9A6NGZ8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SMIM9A6NGZ8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM9A6NGZ8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM9A6NGZ8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SMIM9A6NGZ8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.29■□□□□ 0.68
SMIM9A6NGZ8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.29■□□□□ 0.68
SMIM9A6NGZ8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SMIM9A6NGZ8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM9A6NGZ8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM9A6NGZ8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM9A6NGZ8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM9A6NGZ8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM9A6NGZ8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM9A6NGZ8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM9A6NGZ8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM9A6NGZ8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.26■□□□□ 0.67
SMIM9A6NGZ8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.25■□□□□ 0.67
SMIM9A6NGZ8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM9A6NGZ8 AL161658.1-201ENST00000623641 1967 ntBASIC19.25■□□□□ 0.67
SMIM9A6NGZ8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM9A6NGZ8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.25■□□□□ 0.67
SMIM9A6NGZ8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms