Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.182e-6■□□□□ 10.8
FUBP3Q96I24 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.57e-15■□□□□ 10.8
FUBP3Q96I24 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.927e-15■□□□□ 10.8
FUBP3Q96I24 AC068631.2-201ENST00000418776 501 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.467e-15■□□□□ 10.8
FUBP3Q96I24 DNAJB11-204ENST00000495390 4079 ntTSL 27.15□□□□□ -1.277e-15■□□□□ 10.8
FUBP3Q96I24 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.691e-6■□□□□ 10.7
FUBP3Q96I24 PFDN2-202ENST00000468311 408 ntTSL 224.7■■□□□ 1.541e-6■□□□□ 10.7
FUBP3Q96I24 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.05■□□□□ 0.641e-6■□□□□ 10.7
FUBP3Q96I24 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.84■□□□□ 0.611e-6■□□□□ 10.7
FUBP3Q96I24 HJURP-205ENST00000433484 823 ntTSL 517.24■□□□□ 0.351e-6■□□□□ 10.7
FUBP3Q96I24 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.231e-6■□□□□ 10.7
FUBP3Q96I24 CTSL-206ENST00000495822 988 ntTSL 1 (best)16.01■□□□□ 0.151e-6■□□□□ 10.7
FUBP3Q96I24 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.011e-6■□□□□ 10.7
FUBP3Q96I24 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.99□□□□□ -0.331e-6■□□□□ 10.7
FUBP3Q96I24 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.341e-6■□□□□ 10.7
FUBP3Q96I24 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.351e-6■□□□□ 10.7
FUBP3Q96I24 SEH1L-201ENST00000262124 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.441e-6■□□□□ 10.7
FUBP3Q96I24 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.451e-6■□□□□ 10.7
FUBP3Q96I24 SEH1L-208ENST00000590843 5206 ntTSL 1 (best)11.81□□□□□ -0.521e-6■□□□□ 10.7
FUBP3Q96I24 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.561e-6■□□□□ 10.7
FUBP3Q96I24 PSMD5-204ENST00000373920 569 ntTSL 55.94□□□□□ -1.461e-6■□□□□ 10.7
FUBP3Q96I24 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.318e-7■□□□□ 10.7
FUBP3Q96I24 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.588e-7■□□□□ 10.7
FUBP3Q96I24 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.172e-7■□□□□ 10.7
FUBP3Q96I24 CTNNB1-212ENST00000471014 607 ntTSL 313.73□□□□□ -0.212e-7■□□□□ 10.7
FUBP3Q96I24 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.512e-7■□□□□ 10.7
FUBP3Q96I24 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.622e-7■□□□□ 10.7
FUBP3Q96I24 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.577e-10■□□□□ 10.7
FUBP3Q96I24 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.45□□□□□ -0.267e-10■□□□□ 10.7
FUBP3Q96I24 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.042e-9■□□□□ 10.7
FUBP3Q96I24 XPO1-206ENST00000428210 6776 ntTSL 213.38□□□□□ -0.272e-9■□□□□ 10.7
FUBP3Q96I24 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.272e-9■□□□□ 10.7
FUBP3Q96I24 XPO1-219ENST00000481073 3706 ntTSL 23.7□□□□□ -1.822e-9■□□□□ 10.7
FUBP3Q96I24 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.85■□□□□ 0.932e-6■□□□□ 10.7
FUBP3Q96I24 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.33■□□□□ 0.692e-6■□□□□ 10.7
FUBP3Q96I24 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.342e-6■□□□□ 10.7
FUBP3Q96I24 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)12.35□□□□□ -0.432e-6■□□□□ 10.7
FUBP3Q96I24 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)9.36□□□□□ -0.912e-6■□□□□ 10.7
FUBP3Q96I24 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.05■■□□□ 1.446e-13■□□□□ 10.7
FUBP3Q96I24 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.93■■□□□ 1.426e-13■□□□□ 10.7
FUBP3Q96I24 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.23■■□□□ 1.316e-13■□□□□ 10.7
FUBP3Q96I24 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.546e-13■□□□□ 10.7
FUBP3Q96I24 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.266e-13■□□□□ 10.7
FUBP3Q96I24 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.048e-7■□□□□ 10.7
FUBP3Q96I24 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.143e-7■□□□□ 10.6
FUBP3Q96I24 SLC20A1-207ENST00000490674 3202 ntTSL 1 (best)6.2□□□□□ -1.423e-7■□□□□ 10.6
FUBP3Q96I24 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.932e-8■□□□□ 10.6
FUBP3Q96I24 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.072e-21■□□□□ 10.6
FUBP3Q96I24 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.282e-8■□□□□ 10.6
FUBP3Q96I24 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.742e-8■□□□□ 10.6
FUBP3Q96I24 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.922e-8■□□□□ 10.6
FUBP3Q96I24 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.922e-8■□□□□ 10.6
FUBP3Q96I24 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.922e-8■□□□□ 10.6
FUBP3Q96I24 TFDP1-207ENST00000494812 736 ntTSL 39.15□□□□□ -0.942e-21■□□□□ 10.6
FUBP3Q96I24 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC9.15□□□□□ -0.952e-8■□□□□ 10.6
FUBP3Q96I24 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.082e-8■□□□□ 10.6
FUBP3Q96I24 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.112e-8■□□□□ 10.6
FUBP3Q96I24 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.97□□□□□ -1.291e-14■□□□□ 10.6
FUBP3Q96I24 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.08□□□□□ -1.62e-8■□□□□ 10.6
FUBP3Q96I24 CAND1-207ENST00000544619 4091 ntTSL 1 (best)2.85□□□□□ -1.952e-8■□□□□ 10.6
FUBP3Q96I24 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.57□□□□□ -0.44e-15■□□□□ 10.6
FUBP3Q96I24 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC12.27□□□□□ -0.454e-15■□□□□ 10.6
FUBP3Q96I24 FN1-206ENST00000359671 8524 ntTSL 5 BASIC12.05□□□□□ -0.484e-15■□□□□ 10.6
FUBP3Q96I24 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC11.73□□□□□ -0.534e-15■□□□□ 10.6
FUBP3Q96I24 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC11.35□□□□□ -0.594e-15■□□□□ 10.6
FUBP3Q96I24 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC11.21□□□□□ -0.614e-15■□□□□ 10.6
FUBP3Q96I24 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC11.13□□□□□ -0.634e-15■□□□□ 10.6
FUBP3Q96I24 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC11.01□□□□□ -0.654e-15■□□□□ 10.6
FUBP3Q96I24 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.684e-15■□□□□ 10.6
FUBP3Q96I24 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC9.93□□□□□ -0.824e-15■□□□□ 10.6
FUBP3Q96I24 FN1-227ENST00000498719 2433 ntTSL 29.5□□□□□ -0.894e-15■□□□□ 10.6
FUBP3Q96I24 FN1-224ENST00000492816 9171 ntTSL 55.56□□□□□ -1.524e-15■□□□□ 10.6
FUBP3Q96I24 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.289e-9■□□□□ 10.6
FUBP3Q96I24 AL662884.1-201ENST00000559458 662 ntTSL 2 BASIC8.95□□□□□ -0.989e-9■□□□□ 10.6
FUBP3Q96I24 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.092e-6■□□□□ 10.6
FUBP3Q96I24 RNF149-202ENST00000424632 2010 ntTSL 220.71■□□□□ 0.912e-6■□□□□ 10.6
FUBP3Q96I24 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC9.11□□□□□ -0.952e-7■□□□□ 10.6
FUBP3Q96I24 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.612e-7■□□□□ 10.6
FUBP3Q96I24 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.69■□□□□ 0.263e-23■□□□□ 10.5
FUBP3Q96I24 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.72■□□□□ 0.596e-9■□□□□ 10.5
FUBP3Q96I24 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.046e-9■□□□□ 10.5
FUBP3Q96I24 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.27□□□□□ -1.736e-9■□□□□ 10.5
FUBP3Q96I24 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.552e-8■□□□□ 10.5
FUBP3Q96I24 LRPPRC-204ENST00000419884 888 ntTSL 55.02□□□□□ -1.612e-8■□□□□ 10.5
FUBP3Q96I24 LRPPRC-206ENST00000463456 3549 ntTSL 24.81□□□□□ -1.642e-8■□□□□ 10.5
FUBP3Q96I24 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.583e-7■□□□□ 10.5
FUBP3Q96I24 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.74■□□□□ 0.433e-8■□□□□ 10.4
FUBP3Q96I24 NSL1-202ENST00000366977 2317 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.663e-8■□□□□ 10.4
FUBP3Q96I24 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.188e-10■□□□□ 10.4
FUBP3Q96I24 DDX5-218ENST00000581693 2156 ntTSL 511.95□□□□□ -0.58e-10■□□□□ 10.4
FUBP3Q96I24 DDX5-203ENST00000540698 2225 ntTSL 511.69□□□□□ -0.548e-10■□□□□ 10.4
FUBP3Q96I24 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC10.44□□□□□ -0.748e-10■□□□□ 10.4
FUBP3Q96I24 DDX5-215ENST00000581230 3558 ntTSL 27.76□□□□□ -1.178e-10■□□□□ 10.4
FUBP3Q96I24 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.132e-6■□□□□ 10.4
FUBP3Q96I24 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.622e-6■□□□□ 10.4
FUBP3Q96I24 CREBZF-206ENST00000528561 1099 ntTSL 521.08■□□□□ 0.972e-6■□□□□ 10.4
FUBP3Q96I24 CREBZF-203ENST00000525639 2850 ntTSL 517.89■□□□□ 0.462e-6■□□□□ 10.4
FUBP3Q96I24 CREBZF-201ENST00000260058 1431 ntTSL 217.88■□□□□ 0.452e-6■□□□□ 10.4
FUBP3Q96I24 CREBZF-208ENST00000531515 724 ntTSL 315.28■□□□□ 0.042e-6■□□□□ 10.4
FUBP3Q96I24 CREBZF-205ENST00000527529 898 ntTSL 515.18■□□□□ 0.022e-6■□□□□ 10.4
Retrieved 100 of 4,568 protein–RNA pairs in 167 ms