RNA–Protein interactions for RNA: ENST00000262124.15

SEH1L-201, Transcript of SEH1 like nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEH1L, Length 3,494 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-201ENST00000262124 NISCHQ9Y2I1 1504 aa25.48■■□□□ 1.67
SEH1L-201ENST00000262124 DCAF8L2P0C7V8 631 aa22.39■■□□□ 1.17
SEH1L-201ENST00000262124 SHROOM4Q9ULL8 1493 aa22.36■■□□□ 1.17
SEH1L-201ENST00000262124 SUPT5HO00267 1087 aaKnown RBP21.81■■□□□ 1.08
SEH1L-201ENST00000262124 CCDC180Q9P1Z9 1646 aa21.43■■□□□ 1.02
SEH1L-201ENST00000262124 ZCCHC6Q5VYS8 1495 aaKnown RBP21.38■■□□□ 1.01
SEH1L-201ENST00000262124 ABCC9O60706 1549 aa21.03■□□□□ 0.96
SEH1L-201ENST00000262124 SCRIBQ14160 1630 aa20.66■□□□□ 0.9
SEH1L-201ENST00000262124 CHIC1Q5VXU3 224 aa20.6■□□□□ 0.89
SEH1L-201ENST00000262124 DCAF1Q9Y4B6 1507 aa20.5■□□□□ 0.87
SEH1L-201ENST00000262124 EHMT2Q96KQ7 1210 aa20.48■□□□□ 0.87
SEH1L-201ENST00000262124 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
SEH1L-201ENST00000262124 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
SEH1L-201ENST00000262124 LOC105371045A0A1W2PR82 267 aa20.32■□□□□ 0.84
SEH1L-201ENST00000262124 FAM9AQ8IZU1 332 aaPredicted RBP20.32■□□□□ 0.84
SEH1L-201ENST00000262124 CECR2Q9BXF3 1484 aa20.19■□□□□ 0.82
SEH1L-201ENST00000262124 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
SEH1L-201ENST00000262124 NACADO15069 1562 aa20.1■□□□□ 0.81
SEH1L-201ENST00000262124 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
SEH1L-201ENST00000262124 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
SEH1L-201ENST00000262124 MROH2BQ7Z745 1585 aa19.96■□□□□ 0.79
SEH1L-201ENST00000262124 PCGF6Q9BYE7 350 aa19.96■□□□□ 0.79
SEH1L-201ENST00000262124 WIZO95785 1651 aa19.82■□□□□ 0.76
SEH1L-201ENST00000262124 PPARGC1BQ86YN6 1023 aaKnown RBP19.74■□□□□ 0.75
SEH1L-201ENST00000262124 TTBK1Q5TCY1 1321 aaPredicted RBP19.64■□□□□ 0.73
SEH1L-201ENST00000262124 BAZ1AQ9NRL2 1556 aaPredicted RBP19.56■□□□□ 0.72
SEH1L-201ENST00000262124 UNC13AQ9UPW8 1703 aa19.54■□□□□ 0.72
SEH1L-201ENST00000262124 RANGAP1P46060 587 aaPredicted RBP19.49■□□□□ 0.71
SEH1L-201ENST00000262124 CCDC88BA6NC98 1476 aa19.44■□□□□ 0.7
SEH1L-201ENST00000262124 SMARCA4P51532 1647 aa19.43■□□□□ 0.7
SEH1L-201ENST00000262124 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
SEH1L-201ENST00000262124 BICRAQ9NZM4 1560 aa19.41■□□□□ 0.7
SEH1L-201ENST00000262124 UBTFP17480 764 aaKnown RBP19.34■□□□□ 0.69
SEH1L-201ENST00000262124 HRCP23327 699 aa19.31■□□□□ 0.68
SEH1L-201ENST00000262124 TOP2AP11388 1531 aaKnown RBP19.28■□□□□ 0.68
SEH1L-201ENST00000262124 TRIM26Q12899 539 aaPredicted RBP19.28■□□□□ 0.68
SEH1L-201ENST00000262124 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
SEH1L-201ENST00000262124 SOGA1O94964 1423 aa19.22■□□□□ 0.67
SEH1L-201ENST00000262124 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
SEH1L-201ENST00000262124 RUSC2Q8N2Y8 1516 aa19.16■□□□□ 0.66
SEH1L-201ENST00000262124 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
SEH1L-201ENST00000262124 CSRNP3Q8WYN3 585 aa19.12■□□□□ 0.65
SEH1L-201ENST00000262124 WRNQ14191 1432 aaPredicted RBP eCLIP19.05■□□□□ 0.64
SEH1L-201ENST00000262124 EIF4G1Q04637 1599 aaKnown RBP18.96■□□□□ 0.63
SEH1L-201ENST00000262124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.96■□□□□ 0.63
SEH1L-201ENST00000262124 CEP162Q5TB80 1403 aa18.87■□□□□ 0.61
SEH1L-201ENST00000262124 SYNJ1O43426 1573 aa18.84■□□□□ 0.61
SEH1L-201ENST00000262124 CCER1Q8TC90 406 aaPredicted RBP18.82■□□□□ 0.6
SEH1L-201ENST00000262124 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
SEH1L-201ENST00000262124 PEG3Q9GZU2 1588 aa18.79■□□□□ 0.6
SEH1L-201ENST00000262124 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
SEH1L-201ENST00000262124 APLP2Q06481 763 aa18.76■□□□□ 0.59
SEH1L-201ENST00000262124 TNIKQ9UKE5 1360 aa18.72■□□□□ 0.59
SEH1L-201ENST00000262124 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
SEH1L-201ENST00000262124 ATP1B4Q9UN42 357 aaPredicted RBP18.7■□□□□ 0.58
SEH1L-201ENST00000262124 GOLGA3Q08378 1498 aa18.69■□□□□ 0.58
SEH1L-201ENST00000262124 RAPGEF2Q9Y4G8 1499 aa18.69■□□□□ 0.58
SEH1L-201ENST00000262124 P3H3Q8IVL6 736 aa18.66■□□□□ 0.58
SEH1L-201ENST00000262124 CLIP1P30622 1438 aa18.64■□□□□ 0.57
SEH1L-201ENST00000262124 EEA1Q15075 1411 aa18.63■□□□□ 0.57
SEH1L-201ENST00000262124 ITGAEP38570 1179 aa18.6■□□□□ 0.57
SEH1L-201ENST00000262124 CEP164Q9UPV0 1460 aa18.59■□□□□ 0.57
SEH1L-201ENST00000262124 CC2D2AQ9P2K1 1620 aa18.59■□□□□ 0.57
SEH1L-201ENST00000262124 NESP48681 1621 aa18.56■□□□□ 0.56
SEH1L-201ENST00000262124 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
SEH1L-201ENST00000262124 CUX1P39880 1505 aa18.54■□□□□ 0.56
SEH1L-201ENST00000262124 ZEB1P37275 1124 aaPredicted RBP18.53■□□□□ 0.56
SEH1L-201ENST00000262124 HMGXB3Q12766 1538 aa18.53■□□□□ 0.56
SEH1L-201ENST00000262124 CFTRP13569 1480 aa18.52■□□□□ 0.55
SEH1L-201ENST00000262124 CUX2O14529 1486 aa18.49■□□□□ 0.55
SEH1L-201ENST00000262124 KIF27Q86VH2 1401 aa18.47■□□□□ 0.55
SEH1L-201ENST00000262124 TOP2BQ02880 1626 aa18.47■□□□□ 0.55
SEH1L-201ENST00000262124 KANK4Q5T7N3 995 aaPredicted RBP18.45■□□□□ 0.54
SEH1L-201ENST00000262124 RAD54L2Q9Y4B4 1467 aa18.4■□□□□ 0.54
SEH1L-201ENST00000262124 FANCD2Q9BXW9 1451 aa18.38■□□□□ 0.53
SEH1L-201ENST00000262124 FGD5Q6ZNL6 1462 aa18.37■□□□□ 0.53
SEH1L-201ENST00000262124 ARID3CA6NKF2 412 aa18.35■□□□□ 0.53
SEH1L-201ENST00000262124 VPS8Q8N3P4 1428 aa18.35■□□□□ 0.53
SEH1L-201ENST00000262124 TDRD9Q8NDG6 1382 aaKnown RBP18.34■□□□□ 0.53
SEH1L-201ENST00000262124 IGF1RP08069 1367 aa18.33■□□□□ 0.53
SEH1L-201ENST00000262124 CARMIL1Q5VZK9 1371 aa18.33■□□□□ 0.52
SEH1L-201ENST00000262124 KIF21BO75037 1637 aa18.32■□□□□ 0.52
SEH1L-201ENST00000262124 PRXQ9BXM0 1461 aa18.29■□□□□ 0.52
SEH1L-201ENST00000262124 BIVM-ERCC5R4GMW8 1640 aa18.27■□□□□ 0.52
SEH1L-201ENST00000262124 ARAP1Q96P48 1450 aa18.26■□□□□ 0.51
SEH1L-201ENST00000262124 FAM50AQ14320 339 aaKnown RBP18.24■□□□□ 0.51
SEH1L-201ENST00000262124 FBLN2P98095 1184 aa18.17■□□□□ 0.5
SEH1L-201ENST00000262124 POLA1P09884 1462 aaPredicted RBP18.16■□□□□ 0.5
SEH1L-201ENST00000262124 TOPBP1Q92547 1522 aa18.14■□□□□ 0.5
SEH1L-201ENST00000262124 ARHGAP35Q9NRY4 1499 aa18.14■□□□□ 0.49
SEH1L-201ENST00000262124 FHOD3Q2V2M9 1422 aa18.12■□□□□ 0.49
SEH1L-201ENST00000262124 DIEXFQ68CQ4 756 aaKnown RBP18.12■□□□□ 0.49
SEH1L-201ENST00000262124 ERICH3Q5RHP9 1530 aa18.09■□□□□ 0.49
SEH1L-201ENST00000262124 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.48
SEH1L-201ENST00000262124 YTHDC1Q96MU7 727 aaKnown RBP18.07■□□□□ 0.48
SEH1L-201ENST00000262124 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
SEH1L-201ENST00000262124 AQRO60306 1485 aaKnown RBP eCLIP18.03■□□□□ 0.48
SEH1L-201ENST00000262124 NEUROD1Q13562 356 aa18.01■□□□□ 0.47
SEH1L-201ENST00000262124 DNMBPQ6XZF7 1577 aa18■□□□□ 0.47
SEH1L-201ENST00000262124 CCNB3Q8WWL7 1395 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms