RNA–Protein interactions for RNA: ENST00000194155.6

PCDHB2-201, Transcript of protocadherin beta 2, humanhuman

APPRIS P1 BASIC

Gene PCDHB2, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-201ENST00000194155 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
PCDHB2-201ENST00000194155 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
PCDHB2-201ENST00000194155 SHROOM4Q9ULL8 1493 aa22.17■■□□□ 1.14
PCDHB2-201ENST00000194155 SUPT5HO00267 1087 aaKnown RBP21.99■■□□□ 1.11
PCDHB2-201ENST00000194155 ABCC9O60706 1549 aa21.25■□□□□ 0.99
PCDHB2-201ENST00000194155 PCGF6Q9BYE7 350 aa21.01■□□□□ 0.95
PCDHB2-201ENST00000194155 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
PCDHB2-201ENST00000194155 HRCP23327 699 aa20.92■□□□□ 0.94
PCDHB2-201ENST00000194155 PABPN1Q86U42 306 aaKnown RBP eCLIP20.8■□□□□ 0.92
PCDHB2-201ENST00000194155 PPARGC1BQ86YN6 1023 aaKnown RBP20.76■□□□□ 0.91
PCDHB2-201ENST00000194155 FAM9AQ8IZU1 332 aaPredicted RBP20.64■□□□□ 0.89
PCDHB2-201ENST00000194155 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
PCDHB2-201ENST00000194155 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
PCDHB2-201ENST00000194155 RANGAP1P46060 587 aaPredicted RBP20.28■□□□□ 0.84
PCDHB2-201ENST00000194155 CCDC180Q9P1Z9 1646 aa20.25■□□□□ 0.83
PCDHB2-201ENST00000194155 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
PCDHB2-201ENST00000194155 APLP2Q06481 763 aa20.14■□□□□ 0.81
PCDHB2-201ENST00000194155 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
PCDHB2-201ENST00000194155 LOC105371045A0A1W2PR82 267 aa20.09■□□□□ 0.81
PCDHB2-201ENST00000194155 UBTFP17480 764 aaKnown RBP20.04■□□□□ 0.8
PCDHB2-201ENST00000194155 TTBK1Q5TCY1 1321 aaPredicted RBP20.03■□□□□ 0.8
PCDHB2-201ENST00000194155 TRIM26Q12899 539 aaPredicted RBP19.99■□□□□ 0.79
PCDHB2-201ENST00000194155 SCRIBQ14160 1630 aa19.98■□□□□ 0.79
PCDHB2-201ENST00000194155 ATP1B4Q9UN42 357 aaPredicted RBP19.97■□□□□ 0.79
PCDHB2-201ENST00000194155 ZEB1P37275 1124 aaPredicted RBP19.96■□□□□ 0.79
PCDHB2-201ENST00000194155 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
PCDHB2-201ENST00000194155 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
PCDHB2-201ENST00000194155 MYT1Q01538 1121 aa19.79■□□□□ 0.76
PCDHB2-201ENST00000194155 MYO15BQ96JP2 1530 aa19.79■□□□□ 0.76
PCDHB2-201ENST00000194155 CENPBP07199 599 aaPredicted RBP19.73■□□□□ 0.75
PCDHB2-201ENST00000194155 NACADO15069 1562 aa19.66■□□□□ 0.74
PCDHB2-201ENST00000194155 CCER1Q8TC90 406 aaPredicted RBP19.62■□□□□ 0.73
PCDHB2-201ENST00000194155 YTHDC1Q96MU7 727 aaKnown RBP19.56■□□□□ 0.72
PCDHB2-201ENST00000194155 GTF3C3Q9Y5Q9 886 aa19.55■□□□□ 0.72
PCDHB2-201ENST00000194155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.71
PCDHB2-201ENST00000194155 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.71
PCDHB2-201ENST00000194155 FBLN2P98095 1184 aa19.48■□□□□ 0.71
PCDHB2-201ENST00000194155 ACIN1Q9UKV3 1341 aaKnown RBP19.47■□□□□ 0.71
PCDHB2-201ENST00000194155 NEUROD1Q13562 356 aa19.41■□□□□ 0.7
PCDHB2-201ENST00000194155 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
PCDHB2-201ENST00000194155 DIEXFQ68CQ4 756 aaKnown RBP19.36■□□□□ 0.69
PCDHB2-201ENST00000194155 RSF1Q96T23 1441 aaPredicted RBP19.23■□□□□ 0.67
PCDHB2-201ENST00000194155 MYT1LQ9UL68 1186 aa19.22■□□□□ 0.67
PCDHB2-201ENST00000194155 ITGAEP38570 1179 aa19.2■□□□□ 0.66
PCDHB2-201ENST00000194155 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
PCDHB2-201ENST00000194155 CSRNP3Q8WYN3 585 aa19.12■□□□□ 0.65
PCDHB2-201ENST00000194155 BAZ1BQ9UIG0 1483 aaKnown RBP19.11■□□□□ 0.65
PCDHB2-201ENST00000194155 P3H3Q8IVL6 736 aa19.08■□□□□ 0.64
PCDHB2-201ENST00000194155 BAZ1AQ9NRL2 1556 aaPredicted RBP19■□□□□ 0.63
PCDHB2-201ENST00000194155 ARID3CA6NKF2 412 aa19■□□□□ 0.63
PCDHB2-201ENST00000194155 MROH2BQ7Z745 1585 aa18.87■□□□□ 0.61
PCDHB2-201ENST00000194155 CHMP7Q8WUX9 453 aaPredicted RBP18.85■□□□□ 0.61
PCDHB2-201ENST00000194155 ZNF316A6NFI3 1004 aaPredicted RBP18.85■□□□□ 0.61
PCDHB2-201ENST00000194155 FAM50AQ14320 339 aaKnown RBP18.84■□□□□ 0.61
PCDHB2-201ENST00000194155 ERCC6Q03468 1493 aa18.83■□□□□ 0.61
PCDHB2-201ENST00000194155 WRNQ14191 1432 aaPredicted RBP eCLIP18.73■□□□□ 0.59
PCDHB2-201ENST00000194155 MIER1Q8N108 512 aa18.7■□□□□ 0.58
PCDHB2-201ENST00000194155 SMARCA2P51531 1590 aa18.67■□□□□ 0.58
PCDHB2-201ENST00000194155 NPM1P06748 294 aaKnown RBP eCLIP18.66■□□□□ 0.58
PCDHB2-201ENST00000194155 ERICH6Q7L0X2 663 aa18.65■□□□□ 0.58
PCDHB2-201ENST00000194155 BCANQ96GW7 911 aa18.64■□□□□ 0.57
PCDHB2-201ENST00000194155 ZNF777Q9ULD5 760 aaPredicted RBP18.62■□□□□ 0.57
PCDHB2-201ENST00000194155 CDK11AQ9UQ88 783 aaPredicted RBP18.62■□□□□ 0.57
PCDHB2-201ENST00000194155 CCDC88BA6NC98 1476 aa18.61■□□□□ 0.57
PCDHB2-201ENST00000194155 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
PCDHB2-201ENST00000194155 NEFLP07196 543 aa18.6■□□□□ 0.57
PCDHB2-201ENST00000194155 TRIM52Q96A61 297 aa18.58■□□□□ 0.57
PCDHB2-201ENST00000194155 PDS5BQ9NTI5 1447 aa18.55■□□□□ 0.56
PCDHB2-201ENST00000194155 WIZO95785 1651 aa18.53■□□□□ 0.56
PCDHB2-201ENST00000194155 CADPSQ9ULU8 1353 aa18.52■□□□□ 0.55
PCDHB2-201ENST00000194155 KIF27Q86VH2 1401 aa18.51■□□□□ 0.55
PCDHB2-201ENST00000194155 POLR3GLQ9BT43 218 aa18.47■□□□□ 0.55
PCDHB2-201ENST00000194155 SMARCA4P51532 1647 aa18.45■□□□□ 0.54
PCDHB2-201ENST00000194155 BCL11AQ9H165 835 aa18.42■□□□□ 0.54
PCDHB2-201ENST00000194155 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
PCDHB2-201ENST00000194155 ANP32EQ9BTT0 268 aa18.42■□□□□ 0.54
PCDHB2-201ENST00000194155 CUX2O14529 1486 aa18.4■□□□□ 0.54
PCDHB2-201ENST00000194155 KCNH8Q96L42 1107 aa18.39■□□□□ 0.53
PCDHB2-201ENST00000194155 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.53
PCDHB2-201ENST00000194155 EEA1Q15075 1411 aa18.37■□□□□ 0.53
PCDHB2-201ENST00000194155 EIF4G1Q04637 1599 aaKnown RBP18.36■□□□□ 0.53
PCDHB2-201ENST00000194155 CLIP1P30622 1438 aa18.36■□□□□ 0.53
PCDHB2-201ENST00000194155 SOGA1O94964 1423 aa18.34■□□□□ 0.53
PCDHB2-201ENST00000194155 DNAJC5BQ9UF47 199 aa18.33■□□□□ 0.53
PCDHB2-201ENST00000194155 SUPT16HQ9Y5B9 1047 aaKnown RBP18.33■□□□□ 0.53
PCDHB2-201ENST00000194155 ABCC8Q09428 1581 aa18.33■□□□□ 0.52
PCDHB2-201ENST00000194155 CNGB1Q14028 1251 aaPredicted RBP18.32■□□□□ 0.52
PCDHB2-201ENST00000194155 CARMIL1Q5VZK9 1371 aa18.31■□□□□ 0.52
PCDHB2-201ENST00000194155 MTUS2Q5JR59 1369 aa18.3■□□□□ 0.52
PCDHB2-201ENST00000194155 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
PCDHB2-201ENST00000194155 NCAPD3P42695 1498 aa18.28■□□□□ 0.52
PCDHB2-201ENST00000194155 PLEKHD1A6NEE1 506 aa18.27■□□□□ 0.52
PCDHB2-201ENST00000194155 ZNF326Q5BKZ1 582 aaKnown RBP18.27■□□□□ 0.52
PCDHB2-201ENST00000194155 CHIC2Q9UKJ5 165 aa18.27■□□□□ 0.52
PCDHB2-201ENST00000194155 GOLGA3Q08378 1498 aa18.27■□□□□ 0.52
PCDHB2-201ENST00000194155 FKBP8Q14318 412 aa18.27■□□□□ 0.51
PCDHB2-201ENST00000194155 ESF1Q9H501 851 aaKnown RBP18.25■□□□□ 0.51
PCDHB2-201ENST00000194155 CEP164Q9UPV0 1460 aa18.24■□□□□ 0.51
PCDHB2-201ENST00000194155 FANCD2Q9BXW9 1451 aa18.22■□□□□ 0.51
PCDHB2-201ENST00000194155 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms