RNA–Protein interactions for RNA: ENST00000396185.7

CTNNB1-203, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-203ENST00000396185 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
CTNNB1-203ENST00000396185 CCDC180Q9P1Z9 1646 aa21.43■■□□□ 1.02
CTNNB1-203ENST00000396185 ZCCHC6Q5VYS8 1495 aaKnown RBP21.27■■□□□ 1
CTNNB1-203ENST00000396185 DCAF1Q9Y4B6 1507 aa20.83■□□□□ 0.93
CTNNB1-203ENST00000396185 SHROOM4Q9ULL8 1493 aa20.66■□□□□ 0.9
CTNNB1-203ENST00000396185 MYO15BQ96JP2 1530 aa20.47■□□□□ 0.87
CTNNB1-203ENST00000396185 SUPT5HO00267 1087 aaKnown RBP20.33■□□□□ 0.84
CTNNB1-203ENST00000396185 CHIC1Q5VXU3 224 aa20.32■□□□□ 0.84
CTNNB1-203ENST00000396185 HRCP23327 699 aa20.17■□□□□ 0.82
CTNNB1-203ENST00000396185 ABCC9O60706 1549 aa20.16■□□□□ 0.82
CTNNB1-203ENST00000396185 RB1CC1Q8TDY2 1594 aa19.73■□□□□ 0.75
CTNNB1-203ENST00000396185 RSF1Q96T23 1441 aaPredicted RBP19.73■□□□□ 0.75
CTNNB1-203ENST00000396185 PCGF6Q9BYE7 350 aa19.63■□□□□ 0.73
CTNNB1-203ENST00000396185 SCRIBQ14160 1630 aa19.58■□□□□ 0.73
CTNNB1-203ENST00000396185 NACADO15069 1562 aa19.55■□□□□ 0.72
CTNNB1-203ENST00000396185 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
CTNNB1-203ENST00000396185 TRIM26Q12899 539 aaPredicted RBP19.51■□□□□ 0.71
CTNNB1-203ENST00000396185 EIF4G1Q04637 1599 aaKnown RBP19.49■□□□□ 0.71
CTNNB1-203ENST00000396185 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
CTNNB1-203ENST00000396185 PPARGC1BQ86YN6 1023 aaKnown RBP19.35■□□□□ 0.69
CTNNB1-203ENST00000396185 BAZ1AQ9NRL2 1556 aaPredicted RBP19.35■□□□□ 0.69
CTNNB1-203ENST00000396185 MROH2BQ7Z745 1585 aa19.3■□□□□ 0.68
CTNNB1-203ENST00000396185 ZEB1P37275 1124 aaPredicted RBP19.28■□□□□ 0.68
CTNNB1-203ENST00000396185 WIZO95785 1651 aa19.23■□□□□ 0.67
CTNNB1-203ENST00000396185 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
CTNNB1-203ENST00000396185 TRIM41Q8WV44 630 aa19.12■□□□□ 0.65
CTNNB1-203ENST00000396185 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.64
CTNNB1-203ENST00000396185 WRNQ14191 1432 aaPredicted RBP eCLIP19.03■□□□□ 0.64
CTNNB1-203ENST00000396185 SMARCA4P51532 1647 aa19■□□□□ 0.63
CTNNB1-203ENST00000396185 UNC13AQ9UPW8 1703 aa18.99■□□□□ 0.63
CTNNB1-203ENST00000396185 SMARCA2P51531 1590 aa18.95■□□□□ 0.62
CTNNB1-203ENST00000396185 PEG3Q9GZU2 1588 aa18.88■□□□□ 0.61
CTNNB1-203ENST00000396185 EEA1Q15075 1411 aa18.82■□□□□ 0.6
CTNNB1-203ENST00000396185 CCDC88BA6NC98 1476 aa18.82■□□□□ 0.6
CTNNB1-203ENST00000396185 PELP1Q8IZL8 1130 aaKnown RBP18.78■□□□□ 0.6
CTNNB1-203ENST00000396185 ABCC8Q09428 1581 aa18.73■□□□□ 0.59
CTNNB1-203ENST00000396185 TNIKQ9UKE5 1360 aa18.73■□□□□ 0.59
CTNNB1-203ENST00000396185 KIF21BO75037 1637 aa18.67■□□□□ 0.58
CTNNB1-203ENST00000396185 CEP162Q5TB80 1403 aa18.67■□□□□ 0.58
CTNNB1-203ENST00000396185 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
CTNNB1-203ENST00000396185 BICRAQ9NZM4 1560 aa18.65■□□□□ 0.58
CTNNB1-203ENST00000396185 FAM9AQ8IZU1 332 aaPredicted RBP18.63■□□□□ 0.57
CTNNB1-203ENST00000396185 SOGA1O94964 1423 aa18.56■□□□□ 0.56
CTNNB1-203ENST00000396185 GOLGA3Q08378 1498 aa18.55■□□□□ 0.56
CTNNB1-203ENST00000396185 BAZ1BQ9UIG0 1483 aaKnown RBP18.5■□□□□ 0.55
CTNNB1-203ENST00000396185 SYNJ1O43426 1573 aa18.49■□□□□ 0.55
CTNNB1-203ENST00000396185 RUSC2Q8N2Y8 1516 aa18.47■□□□□ 0.55
CTNNB1-203ENST00000396185 CEP164Q9UPV0 1460 aa18.45■□□□□ 0.54
CTNNB1-203ENST00000396185 ACIN1Q9UKV3 1341 aaKnown RBP18.42■□□□□ 0.54
CTNNB1-203ENST00000396185 BIVM-ERCC5R4GMW8 1640 aa18.42■□□□□ 0.54
CTNNB1-203ENST00000396185 CSRNP3Q8WYN3 585 aa18.39■□□□□ 0.54
CTNNB1-203ENST00000396185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.38■□□□□ 0.53
CTNNB1-203ENST00000396185 TOP2BQ02880 1626 aa18.37■□□□□ 0.53
CTNNB1-203ENST00000396185 CCER1Q8TC90 406 aaPredicted RBP18.34■□□□□ 0.53
CTNNB1-203ENST00000396185 ERICH3Q5RHP9 1530 aa18.32■□□□□ 0.52
CTNNB1-203ENST00000396185 ATAD2BQ9ULI0 1458 aa18.32■□□□□ 0.52
CTNNB1-203ENST00000396185 VPS8Q8N3P4 1428 aa18.31■□□□□ 0.52
CTNNB1-203ENST00000396185 DIEXFQ68CQ4 756 aaKnown RBP18.28■□□□□ 0.52
CTNNB1-203ENST00000396185 NEUROD1Q13562 356 aa18.27■□□□□ 0.52
CTNNB1-203ENST00000396185 CLIP1P30622 1438 aa18.24■□□□□ 0.51
CTNNB1-203ENST00000396185 PRXQ9BXM0 1461 aa18.18■□□□□ 0.5
CTNNB1-203ENST00000396185 EHMT2Q96KQ7 1210 aa18.18■□□□□ 0.5
CTNNB1-203ENST00000396185 CUX2O14529 1486 aa18.18■□□□□ 0.5
CTNNB1-203ENST00000396185 ZNF316A6NFI3 1004 aaPredicted RBP18.18■□□□□ 0.5
CTNNB1-203ENST00000396185 HMGXB3Q12766 1538 aa18.17■□□□□ 0.5
CTNNB1-203ENST00000396185 RAPGEF2Q9Y4G8 1499 aa18.17■□□□□ 0.5
CTNNB1-203ENST00000396185 CENPBP07199 599 aaPredicted RBP18.16■□□□□ 0.5
CTNNB1-203ENST00000396185 CLSPNQ9HAW4 1339 aa18.15■□□□□ 0.5
CTNNB1-203ENST00000396185 PRDM2Q13029 1718 aa18.15■□□□□ 0.5
CTNNB1-203ENST00000396185 ARAP1Q96P48 1450 aa18.09■□□□□ 0.49
CTNNB1-203ENST00000396185 RRBP1Q9P2E9 1410 aaKnown RBP18.05■□□□□ 0.48
CTNNB1-203ENST00000396185 GTF3C3Q9Y5Q9 886 aa18.04■□□□□ 0.48
CTNNB1-203ENST00000396185 UBTFP17480 764 aaKnown RBP18.03■□□□□ 0.48
CTNNB1-203ENST00000396185 NCAPD3P42695 1498 aa18.02■□□□□ 0.47
CTNNB1-203ENST00000396185 MAP3K1Q13233 1512 aa18.01■□□□□ 0.47
CTNNB1-203ENST00000396185 CUX1P39880 1505 aa17.99■□□□□ 0.47
CTNNB1-203ENST00000396185 MYT1Q01538 1121 aa17.96■□□□□ 0.46
CTNNB1-203ENST00000396185 DHX57Q6P158 1386 aaKnown RBP17.95■□□□□ 0.46
CTNNB1-203ENST00000396185 CFTRP13569 1480 aa17.92■□□□□ 0.46
CTNNB1-203ENST00000396185 MIER1Q8N108 512 aa17.85■□□□□ 0.45
CTNNB1-203ENST00000396185 ARHGAP35Q9NRY4 1499 aa17.85■□□□□ 0.45
CTNNB1-203ENST00000396185 CFAP43Q8NDM7 1665 aa17.83■□□□□ 0.45
CTNNB1-203ENST00000396185 PABPN1Q86U42 306 aaKnown RBP eCLIP17.83■□□□□ 0.441e-9■□□□□ 10.5
CTNNB1-203ENST00000396185 KIF27Q86VH2 1401 aa17.82■□□□□ 0.44
CTNNB1-203ENST00000396185 TIAM1Q13009 1591 aa17.8■□□□□ 0.44
CTNNB1-203ENST00000396185 MAPKBP1O60336 1514 aa17.78■□□□□ 0.44
CTNNB1-203ENST00000396185 TTBK1Q5TCY1 1321 aaPredicted RBP17.74■□□□□ 0.43
CTNNB1-203ENST00000396185 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
CTNNB1-203ENST00000396185 CCNB3Q8WWL7 1395 aa17.71■□□□□ 0.43
CTNNB1-203ENST00000396185 APLP2Q06481 763 aa17.68■□□□□ 0.42
CTNNB1-203ENST00000396185 KANK4Q5T7N3 995 aaPredicted RBP17.68■□□□□ 0.42
CTNNB1-203ENST00000396185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.65■□□□□ 0.429e-12■■□□□ 14.1
CTNNB1-203ENST00000396185 LRRC9Q6ZRR7 1453 aa17.64■□□□□ 0.41
CTNNB1-203ENST00000396185 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.415e-8■■■■■ 34.8
CTNNB1-203ENST00000396185 IGF1RP08069 1367 aa17.63■□□□□ 0.41
CTNNB1-203ENST00000396185 EFCAB5A4FU69 1503 aa17.6■□□□□ 0.41
CTNNB1-203ENST00000396185 CC2D2AQ9P2K1 1620 aa17.6■□□□□ 0.41
CTNNB1-203ENST00000396185 PCF11O94913 1555 aaKnown RBP17.57■□□□□ 0.4
CTNNB1-203ENST00000396185 CTTNBP2Q8WZ74 1663 aa17.57■□□□□ 0.4
CTNNB1-203ENST00000396185 WDR97A6NE52 1622 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms