RNA–Protein interactions for RNA: ENST00000343150.9

CTSL-203, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 2,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-203ENST00000343150 NISCHQ9Y2I1 1504 aa34.8■■■■□ 3.16
CTSL-203ENST00000343150 CCDC180Q9P1Z9 1646 aa30.47■■■□□ 2.47
CTSL-203ENST00000343150 ZCCHC6Q5VYS8 1495 aaKnown RBP29.19■■■□□ 2.26
CTSL-203ENST00000343150 ABCC9O60706 1549 aa29.01■■■□□ 2.24
CTSL-203ENST00000343150 SHROOM4Q9ULL8 1493 aa28.88■■■□□ 2.21
CTSL-203ENST00000343150 DCAF1Q9Y4B6 1507 aa28.79■■■□□ 2.2
CTSL-203ENST00000343150 DCAF8L2P0C7V8 631 aa28.71■■■□□ 2.19
CTSL-203ENST00000343150 MYO15BQ96JP2 1530 aa28.55■■■□□ 2.16
CTSL-203ENST00000343150 SUPT5HO00267 1087 aaKnown RBP28.5■■■□□ 2.15
CTSL-203ENST00000343150 NACADO15069 1562 aa28.43■■■□□ 2.14
CTSL-203ENST00000343150 RB1CC1Q8TDY2 1594 aa28.23■■■□□ 2.11
CTSL-203ENST00000343150 CHIC1Q5VXU3 224 aa28.01■■■□□ 2.08
CTSL-203ENST00000343150 SCRIBQ14160 1630 aa27.96■■■□□ 2.07
CTSL-203ENST00000343150 HRCP23327 699 aa27.8■■■□□ 2.04
CTSL-203ENST00000343150 UNC13AQ9UPW8 1703 aa27.7■■■□□ 2.02
CTSL-203ENST00000343150 BICRAQ9NZM4 1560 aa27.45■■□□□ 1.98
CTSL-203ENST00000343150 PCGF6Q9BYE7 350 aa27.4■■□□□ 1.98
CTSL-203ENST00000343150 PABPN1Q86U42 306 aaKnown RBP eCLIP27.3■■□□□ 1.96
CTSL-203ENST00000343150 CECR2Q9BXF3 1484 aa27.07■■□□□ 1.92
CTSL-203ENST00000343150 LOC105371045A0A1W2PR82 267 aa27.05■■□□□ 1.92
CTSL-203ENST00000343150 TRIM26Q12899 539 aaPredicted RBP26.95■■□□□ 1.91
CTSL-203ENST00000343150 PPARGC1BQ86YN6 1023 aaKnown RBP26.94■■□□□ 1.9
CTSL-203ENST00000343150 RSF1Q96T23 1441 aaPredicted RBP26.93■■□□□ 1.9
CTSL-203ENST00000343150 MROH2BQ7Z745 1585 aa26.89■■□□□ 1.89
CTSL-203ENST00000343150 BAZ1AQ9NRL2 1556 aaPredicted RBP26.87■■□□□ 1.89
CTSL-203ENST00000343150 SMARCA4P51532 1647 aa26.81■■□□□ 1.88
CTSL-203ENST00000343150 WIZO95785 1651 aa26.64■■□□□ 1.86
CTSL-203ENST00000343150 ZEB1P37275 1124 aaPredicted RBP26.64■■□□□ 1.85
CTSL-203ENST00000343150 TRIM41Q8WV44 630 aa26.63■■□□□ 1.85
CTSL-203ENST00000343150 EIF4G1Q04637 1599 aaKnown RBP26.6■■□□□ 1.85
CTSL-203ENST00000343150 PEG3Q9GZU2 1588 aa26.51■■□□□ 1.83
CTSL-203ENST00000343150 ATAD2BQ9ULI0 1458 aa26.43■■□□□ 1.82
CTSL-203ENST00000343150 SMARCA2P51531 1590 aa26.38■■□□□ 1.81
CTSL-203ENST00000343150 TOP2AP11388 1531 aaKnown RBP26.36■■□□□ 1.81
CTSL-203ENST00000343150 CC2D2AQ9P2K1 1620 aa26.27■■□□□ 1.8
CTSL-203ENST00000343150 FAM9AQ8IZU1 332 aaPredicted RBP26.27■■□□□ 1.8
CTSL-203ENST00000343150 NCAPD3P42695 1498 aa26.25■■□□□ 1.79
CTSL-203ENST00000343150 BAZ1BQ9UIG0 1483 aaKnown RBP26.24■■□□□ 1.79
CTSL-203ENST00000343150 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
CTSL-203ENST00000343150 CCDC88BA6NC98 1476 aa26.09■■□□□ 1.77
CTSL-203ENST00000343150 EHMT2Q96KQ7 1210 aa25.9■■□□□ 1.74
CTSL-203ENST00000343150 PELP1Q8IZL8 1130 aaKnown RBP25.89■■□□□ 1.74
CTSL-203ENST00000343150 DNAJC5BQ9UF47 199 aa25.87■■□□□ 1.73
CTSL-203ENST00000343150 WRNQ14191 1432 aaPredicted RBP eCLIP25.83■■□□□ 1.72
CTSL-203ENST00000343150 SCAF1Q9H7N4 1312 aaKnown RBP25.74■■□□□ 1.71
CTSL-203ENST00000343150 ABCC8Q09428 1581 aa25.7■■□□□ 1.7
CTSL-203ENST00000343150 CCER1Q8TC90 406 aaPredicted RBP25.68■■□□□ 1.7
CTSL-203ENST00000343150 EEA1Q15075 1411 aa25.67■■□□□ 1.7
CTSL-203ENST00000343150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.65■■□□□ 1.7
CTSL-203ENST00000343150 CEP162Q5TB80 1403 aa25.64■■□□□ 1.69
CTSL-203ENST00000343150 TNIKQ9UKE5 1360 aa25.63■■□□□ 1.69
CTSL-203ENST00000343150 CFTRP13569 1480 aa25.59■■□□□ 1.69
CTSL-203ENST00000343150 CADPSQ9ULU8 1353 aa25.54■■□□□ 1.68
CTSL-203ENST00000343150 SOGA1O94964 1423 aa25.52■■□□□ 1.68
CTSL-203ENST00000343150 ACIN1Q9UKV3 1341 aaKnown RBP25.47■■□□□ 1.67
CTSL-203ENST00000343150 PRDM2Q13029 1718 aa25.44■■□□□ 1.66
CTSL-203ENST00000343150 CSRNP3Q8WYN3 585 aa25.44■■□□□ 1.66
CTSL-203ENST00000343150 GOLGA3Q08378 1498 aa25.43■■□□□ 1.66
CTSL-203ENST00000343150 NESP48681 1621 aa25.42■■□□□ 1.66
CTSL-203ENST00000343150 DIEXFQ68CQ4 756 aaKnown RBP25.4■■□□□ 1.66
CTSL-203ENST00000343150 LAMC3Q9Y6N6 1575 aa25.38■■□□□ 1.65
CTSL-203ENST00000343150 RUSC2Q8N2Y8 1516 aa25.34■■□□□ 1.65
CTSL-203ENST00000343150 CENPBP07199 599 aaPredicted RBP25.32■■□□□ 1.64
CTSL-203ENST00000343150 NEUROD1Q13562 356 aa25.31■■□□□ 1.64
CTSL-203ENST00000343150 KIF21BO75037 1637 aa25.29■■□□□ 1.64
CTSL-203ENST00000343150 UBTFP17480 764 aaKnown RBP25.28■■□□□ 1.64
CTSL-203ENST00000343150 CEP164Q9UPV0 1460 aa25.26■■□□□ 1.63
CTSL-203ENST00000343150 FANCD2Q9BXW9 1451 aa25.26■■□□□ 1.63
CTSL-203ENST00000343150 SYNJ1O43426 1573 aa25.24■■□□□ 1.63
CTSL-203ENST00000343150 TTBK1Q5TCY1 1321 aaPredicted RBP25.21■■□□□ 1.63
CTSL-203ENST00000343150 ZNF316A6NFI3 1004 aaPredicted RBP25.17■■□□□ 1.62
CTSL-203ENST00000343150 PDS5BQ9NTI5 1447 aa25.17■■□□□ 1.62
CTSL-203ENST00000343150 CUX1P39880 1505 aa25.16■■□□□ 1.62
CTSL-203ENST00000343150 TOP2BQ02880 1626 aa25.15■■□□□ 1.62
CTSL-203ENST00000343150 BIVM-ERCC5R4GMW8 1640 aa25.14■■□□□ 1.61
CTSL-203ENST00000343150 KIF21AQ7Z4S6 1674 aa25.11■■□□□ 1.61
CTSL-203ENST00000343150 GTF3C3Q9Y5Q9 886 aa25.1■■□□□ 1.61
CTSL-203ENST00000343150 CLIP1P30622 1438 aa25.09■■□□□ 1.61
CTSL-203ENST00000343150 VPS8Q8N3P4 1428 aa25.08■■□□□ 1.6
CTSL-203ENST00000343150 DNMBPQ6XZF7 1577 aa24.99■■□□□ 1.59
CTSL-203ENST00000343150 URB2Q14146 1524 aaKnown RBP24.99■■□□□ 1.59
CTSL-203ENST00000343150 TOPBP1Q92547 1522 aa24.97■■□□□ 1.59
CTSL-203ENST00000343150 RAPGEF2Q9Y4G8 1499 aa24.92■■□□□ 1.58
CTSL-203ENST00000343150 FGD5Q6ZNL6 1462 aa24.9■■□□□ 1.58
CTSL-203ENST00000343150 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.57
CTSL-203ENST00000343150 HNRNPUL2Q1KMD3 747 aaKnown RBP24.88■■□□□ 1.57
CTSL-203ENST00000343150 APLP2Q06481 763 aa24.87■■□□□ 1.57
CTSL-203ENST00000343150 ERCC6Q03468 1493 aa24.86■■□□□ 1.57
CTSL-203ENST00000343150 ERICH3Q5RHP9 1530 aa24.83■■□□□ 1.57
CTSL-203ENST00000343150 POLA1P09884 1462 aaPredicted RBP24.82■■□□□ 1.56
CTSL-203ENST00000343150 CLSPNQ9HAW4 1339 aa24.8■■□□□ 1.56
CTSL-203ENST00000343150 WDR62O43379 1518 aa24.78■■□□□ 1.56
CTSL-203ENST00000343150 THOC2Q8NI27 1593 aaKnown RBP24.78■■□□□ 1.56
CTSL-203ENST00000343150 MIER1Q8N108 512 aa24.76■■□□□ 1.55
CTSL-203ENST00000343150 MYT1Q01538 1121 aa24.74■■□□□ 1.55
CTSL-203ENST00000343150 RAD54L2Q9Y4B4 1467 aa24.74■■□□□ 1.55
CTSL-203ENST00000343150 PRXQ9BXM0 1461 aa24.73■■□□□ 1.55
CTSL-203ENST00000343150 ABCA10Q8WWZ4 1543 aa24.68■■□□□ 1.54
CTSL-203ENST00000343150 YTHDC1Q96MU7 727 aaKnown RBP24.67■■□□□ 1.54
CTSL-203ENST00000343150 CUX2O14529 1486 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms