RNA–Protein interactions for RNA: ENST00000366977.7

NSL1-202, Transcript of NSL1, MIS12 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSL1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSL1-202ENST00000366977 NISCHQ9Y2I1 1504 aa23.05■■□□□ 1.28
NSL1-202ENST00000366977 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
NSL1-202ENST00000366977 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.73
NSL1-202ENST00000366977 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
NSL1-202ENST00000366977 SUPT5HO00267 1087 aaKnown RBP19.42■□□□□ 0.7
NSL1-202ENST00000366977 DCAF8L2P0C7V8 631 aa19.34■□□□□ 0.69
NSL1-202ENST00000366977 MYO15BQ96JP2 1530 aa18.84■□□□□ 0.61
NSL1-202ENST00000366977 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
NSL1-202ENST00000366977 DCAF1Q9Y4B6 1507 aa18.78■□□□□ 0.6
NSL1-202ENST00000366977 SCRIBQ14160 1630 aa18.51■□□□□ 0.55
NSL1-202ENST00000366977 ABCC9O60706 1549 aa18.41■□□□□ 0.54
NSL1-202ENST00000366977 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
NSL1-202ENST00000366977 RSF1Q96T23 1441 aaPredicted RBP18.28■□□□□ 0.52
NSL1-202ENST00000366977 PCGF6Q9BYE7 350 aa18.21■□□□□ 0.51
NSL1-202ENST00000366977 NACADO15069 1562 aa18.21■□□□□ 0.51
NSL1-202ENST00000366977 RB1CC1Q8TDY2 1594 aa18.16■□□□□ 0.5
NSL1-202ENST00000366977 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.49
NSL1-202ENST00000366977 HRCP23327 699 aa18.08■□□□□ 0.48
NSL1-202ENST00000366977 MROH2BQ7Z745 1585 aa18.03■□□□□ 0.48
NSL1-202ENST00000366977 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
NSL1-202ENST00000366977 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
NSL1-202ENST00000366977 PPARGC1BQ86YN6 1023 aaKnown RBP17.97■□□□□ 0.47
NSL1-202ENST00000366977 TRIM41Q8WV44 630 aa17.96■□□□□ 0.47
NSL1-202ENST00000366977 WIZO95785 1651 aa17.96■□□□□ 0.47
NSL1-202ENST00000366977 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
NSL1-202ENST00000366977 TRIM26Q12899 539 aaPredicted RBP17.71■□□□□ 0.43
NSL1-202ENST00000366977 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
NSL1-202ENST00000366977 PABPN1Q86U42 306 aaKnown RBP eCLIP17.63■□□□□ 0.41
NSL1-202ENST00000366977 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
NSL1-202ENST00000366977 SMARCA4P51532 1647 aa17.59■□□□□ 0.41
NSL1-202ENST00000366977 ABCC8Q09428 1581 aa17.58■□□□□ 0.4
NSL1-202ENST00000366977 CCDC88BA6NC98 1476 aa17.54■□□□□ 0.4
NSL1-202ENST00000366977 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.4
NSL1-202ENST00000366977 SMARCA2P51531 1590 aa17.5■□□□□ 0.39
NSL1-202ENST00000366977 BICRAQ9NZM4 1560 aa17.47■□□□□ 0.39
NSL1-202ENST00000366977 SOGA1O94964 1423 aa17.38■□□□□ 0.37
NSL1-202ENST00000366977 RUSC2Q8N2Y8 1516 aa17.36■□□□□ 0.37
NSL1-202ENST00000366977 TTBK1Q5TCY1 1321 aaPredicted RBP17.36■□□□□ 0.37
NSL1-202ENST00000366977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
NSL1-202ENST00000366977 CEP162Q5TB80 1403 aa17.18■□□□□ 0.34
NSL1-202ENST00000366977 PEG3Q9GZU2 1588 aa17.16■□□□□ 0.34
NSL1-202ENST00000366977 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
NSL1-202ENST00000366977 ATAD2BQ9ULI0 1458 aa17.15■□□□□ 0.34
NSL1-202ENST00000366977 SYNJ1O43426 1573 aa17.14■□□□□ 0.34
NSL1-202ENST00000366977 ZEB1P37275 1124 aaPredicted RBP17.14■□□□□ 0.33
NSL1-202ENST00000366977 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
NSL1-202ENST00000366977 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
NSL1-202ENST00000366977 TNIKQ9UKE5 1360 aa17.08■□□□□ 0.32
NSL1-202ENST00000366977 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
NSL1-202ENST00000366977 CCER1Q8TC90 406 aaPredicted RBP17.03■□□□□ 0.32
NSL1-202ENST00000366977 RANGAP1P46060 587 aaPredicted RBP17.02■□□□□ 0.31
NSL1-202ENST00000366977 GOLGA3Q08378 1498 aa17■□□□□ 0.31
NSL1-202ENST00000366977 EEA1Q15075 1411 aa16.99■□□□□ 0.31
NSL1-202ENST00000366977 RAPGEF2Q9Y4G8 1499 aa16.92■□□□□ 0.3
NSL1-202ENST00000366977 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
NSL1-202ENST00000366977 CEP164Q9UPV0 1460 aa16.88■□□□□ 0.29
NSL1-202ENST00000366977 KIF21BO75037 1637 aa16.87■□□□□ 0.29
NSL1-202ENST00000366977 NCAPD3P42695 1498 aa16.87■□□□□ 0.29
NSL1-202ENST00000366977 CLIP1P30622 1438 aa16.85■□□□□ 0.29
NSL1-202ENST00000366977 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
NSL1-202ENST00000366977 TOP2BQ02880 1626 aa16.82■□□□□ 0.28
NSL1-202ENST00000366977 HMGXB3Q12766 1538 aa16.82■□□□□ 0.28
NSL1-202ENST00000366977 BIVM-ERCC5R4GMW8 1640 aa16.76■□□□□ 0.27
NSL1-202ENST00000366977 CUX1P39880 1505 aa16.76■□□□□ 0.27
NSL1-202ENST00000366977 SCAF1Q9H7N4 1312 aaKnown RBP16.74■□□□□ 0.27
NSL1-202ENST00000366977 VPS8Q8N3P4 1428 aa16.74■□□□□ 0.27
NSL1-202ENST00000366977 DIEXFQ68CQ4 756 aaKnown RBP16.66■□□□□ 0.26
NSL1-202ENST00000366977 PRXQ9BXM0 1461 aa16.66■□□□□ 0.26
NSL1-202ENST00000366977 ARAP1Q96P48 1450 aa16.65■□□□□ 0.26
NSL1-202ENST00000366977 KANK4Q5T7N3 995 aaPredicted RBP16.64■□□□□ 0.25
NSL1-202ENST00000366977 CFTRP13569 1480 aa16.63■□□□□ 0.25
NSL1-202ENST00000366977 APLP2Q06481 763 aa16.62■□□□□ 0.25
NSL1-202ENST00000366977 NEUROD1Q13562 356 aa16.58■□□□□ 0.25
NSL1-202ENST00000366977 CC2D2AQ9P2K1 1620 aa16.58■□□□□ 0.25
NSL1-202ENST00000366977 ERICH3Q5RHP9 1530 aa16.57■□□□□ 0.24
NSL1-202ENST00000366977 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
NSL1-202ENST00000366977 ZNF316A6NFI3 1004 aaPredicted RBP16.52■□□□□ 0.24
NSL1-202ENST00000366977 CADPSQ9ULU8 1353 aa16.51■□□□□ 0.23
NSL1-202ENST00000366977 CUX2O14529 1486 aa16.5■□□□□ 0.23
NSL1-202ENST00000366977 ARHGAP35Q9NRY4 1499 aa16.49■□□□□ 0.23
NSL1-202ENST00000366977 ACIN1Q9UKV3 1341 aaKnown RBP16.48■□□□□ 0.23
NSL1-202ENST00000366977 PRDM2Q13029 1718 aa16.46■□□□□ 0.23
NSL1-202ENST00000366977 IGF1RP08069 1367 aa16.46■□□□□ 0.23
NSL1-202ENST00000366977 FGD5Q6ZNL6 1462 aa16.45■□□□□ 0.22
NSL1-202ENST00000366977 ITGAEP38570 1179 aa16.44■□□□□ 0.22
NSL1-202ENST00000366977 YTHDC1Q96MU7 727 aaKnown RBP16.41■□□□□ 0.22
NSL1-202ENST00000366977 MIER1Q8N108 512 aa16.41■□□□□ 0.22
NSL1-202ENST00000366977 P3H3Q8IVL6 736 aa16.4■□□□□ 0.22
NSL1-202ENST00000366977 NESP48681 1621 aa16.4■□□□□ 0.22
NSL1-202ENST00000366977 DHX57Q6P158 1386 aaKnown RBP16.39■□□□□ 0.21
NSL1-202ENST00000366977 RAD54L2Q9Y4B4 1467 aa16.38■□□□□ 0.21
NSL1-202ENST00000366977 CARMIL1Q5VZK9 1371 aa16.37■□□□□ 0.21
NSL1-202ENST00000366977 GTF3C3Q9Y5Q9 886 aa16.36■□□□□ 0.21
NSL1-202ENST00000366977 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
NSL1-202ENST00000366977 FANCD2Q9BXW9 1451 aa16.34■□□□□ 0.21
NSL1-202ENST00000366977 RRBP1Q9P2E9 1410 aaKnown RBP16.33■□□□□ 0.2
NSL1-202ENST00000366977 MYT1Q01538 1121 aa16.3■□□□□ 0.2
NSL1-202ENST00000366977 CCNB3Q8WWL7 1395 aa16.29■□□□□ 0.2
NSL1-202ENST00000366977 ATP1B4Q9UN42 357 aaPredicted RBP16.29■□□□□ 0.2
NSL1-202ENST00000366977 TIAM1Q13009 1591 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms